Result for your query miRNA sequence
>sgiv-miR-homohsv
guucaca

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gttcaca7
MIMAT0034900efu-miR-27b1.......7100
MIMAT0028686mdo-miR-7339-5p2.......8100
MIMAT0014788api-miR-30487.......1100
MIMAT0013824osa-miR28748.......2100
MIMAT0026585mml-miR-124a-5p1.......7100
MIMAT0026511gga-miR-124a-5p1.......7100
MIMAT0037061ssc-miR-9843-3p8_......385
MIMAT0036868oha-miR-27b-3p1_......685
MIMAT0036866oha-miR-27a-3p1_......685
MIMAT0036606tch-miR-27a-3p1_......685
MIMAT0036535tch-miR-27b-3p1_......685
MIMAT0036108chi-miR-27b-3p1_......685
MIMAT0036106chi-miR-27a-3p1_......685
MIMAT0035450sly-miR9472-3p1_......685
MIMAT0035090efu-miR-93368_......385
MIMAT0034902efu-miR-92706_......185
MIMAT0033675sma-miR-8477-5p6_......185
MIMAT0033191ppc-miR-8323-3p1_......685
MIMAT0033083ppc-miR-8287-5p3_......885
MIMAT0033037ppc-miR-2238k-5p3......_885
MIMAT0032940ppc-miR-2238i-5p3......_885
MIMAT0032930ppc-miR-2238h-5p3......_885
MIMAT0032908ppc-miR-8231-5p8......_385
MIMAT0032894ppc-miR-2238g-5p3......_885
MIMAT0032856ppc-miR-2238f-5p3......_885
MIMAT0032582ssa-miR-27d-3p1_......685
MIMAT0032579ssa-miR-27c-3p1_......685
MIMAT0032577ssa-miR-27b-3p1_......685
MIMAT0032574ssa-miR-27a-3p1_......685
MIMAT0030816prd-miR-7950b-5p1......_685
MIMAT0030514prd-miR-7879-5p8_......385
MIMAT0030100bdi-miR5167b-3p6_......185
MIMAT0030053oar-miR-27a1_......685
MIMAT0029677cbn-miR-76343_......885
MIMAT0029491ipu-miR-27e1_......685
MIMAT0029490ipu-miR-27d1_......685
MIMAT0029489ipu-miR-27c1_......685
MIMAT0029488ipu-miR-27b1_......685
MIMAT0029487ipu-miR-27a1_......685
MIMAT0028986oan-miR-7419-5p3_......885
MIMAT0028932mdo-miR-7398h-5p8_......385
MIMAT0028770mdo-miR-7370i-5p2_......785
MIMAT0028723mdo-miR-7355-3p2_......785
MIMAT0028567mdo-miR-7291-3p3_......885
MIMAT0028208dre-miR-7149-5p6_......185
MIMAT0026398sbi-miR5565g-5p1_......685
MIMAT0026285ccr-miR-27d1_......685
MIMAT0026284ccr-miR-27c-3p1_......685
MIMAT0026282ccr-miR-27a1_......685
MIMAT0027990mmu-miR-7043-5p6_......185
MIMAT0027342tgu-miR-1467-3p1_......685
MIMAT0025124mmu-miR-63783......_885
MIMAT0025054rno-miR-63176......_185
MIMAT0027293ppe-miR62696_......185
MIMAT0024204ggo-miR-8876......_185
MIMAT0024112ggo-miR-27b1_......685
MIMAT0023932cgr-miR-350-3p1_......685
MIMAT0023877cgr-miR-27b-3p1_......685
MIMAT0023875cgr-miR-27a-3p1_......685
MIMAT0022789sha-miR-27b1_......685
MIMAT0022647ola-miR-27d-3p1_......685
MIMAT0022646ola-miR-27a1_......685
MIMAT0022582ola-miR-27c-3p1_......685
MIMAT0026457tur-miR-124-2-5p3......_885
MIMAT0022189cel-miR-5549-5p8_......385
MIMAT0021908aca-miR-27b-3p1_......685
MIMAT0021906aca-miR-27a-3p1_......685
MIMAT0021574asu-miR-5356b-5p3......_885
MIMAT0021211mtr-miR4414b6_......185
MIMAT0019575pma-miR-4545-5p2_......785
MIMAT0019415pma-miR-27b-3p1_......685
MIMAT0019413pma-miR-27a1_......685
MIMAT0017988hsa-miR-36117_......285
MIMAT0017971ssc-miR-146a-3p8_......385
MIMAT0016835cin-miR-4214-5p8_......385
MIMAT0016708cin-miR-4117-5p8_......385
MIMAT0016695cin-miR-4108-5p8_......385
MIMAT0017878rno-miR-3585-5p1_......685
MIMAT0016122ppy-miR-8876......_185
MIMAT0015941ppy-miR-513c1_......685
MIMAT0015940ppy-miR-513b1_......685
MIMAT0015938ppy-miR-513a-5p1_......685
MIMAT0015734ppy-miR-27b1_......685
MIMAT0015385bmo-miR-32077_......285
MIMAT0014534tgu-miR-27-3p1_......685
MIMAT0013890ssc-miR-27b-3p1_......685
MIMAT0013191eca-miR-3501_......685
MIMAT0013114eca-miR-27b1_......685
MIMAT0012988eca-miR-27a1_......685
MIMAT0013543cte-miR-26906_......185
MIMAT0012519dsi-miR-2582a-5p1_......685
MIMAT0011738ppc-miR-2241c1_......685
MIMAT0011425cel-miR-2207-5p6_......185
MIMAT0010203hsv2-miR-H4-5p3......_885
MIMAT0010044osa-miR1428g-5p3_......885
MIMAT0010043osa-miR1428f-5p3_......885
MIMAT0008330ptr-miR-8876......_185
MIMAT0008078ptr-miR-27b1_......685
MIMAT0007784osa-miR1428e-5p3_......885
MIMAT0006704cfa-miR-3501_......685
MIMAT0006641cfa-miR-27a1_......685
MIMAT0006613cfa-miR-27b1_......685
MIMAT0006526mml-miR-8876......_185
MIMAT0026824mml-miR-146a-3p8_......385
MIMAT0006167mml-miR-27b-3p1_......685
MIMAT0007678gga-miR-1769-3p8_......385
MIMAT0007568gga-miR-16811_......685
MIMAT0007392gma-miR15303_......885
MIMAT0006001ptc-miR1444c1_......685
MIMAT0006000ptc-miR1444b1_......685
MIMAT0007063oan-miR-27a-3p1_......685
MIMAT0006957oan-miR-27b-3p1_......685
MIMAT0005788hsa-miR-513b-5p1_......685
MIMAT0005786pbi-miR-513c1_......685
MIMAT0005785pbi-miR-513b1_......685
MIMAT0005784pbi-miR-513a1_......685
MIMAT0005777ptr-miR-513b1_......685
MIMAT0005776ptr-miR-513a1_......685
MIMAT0005768mml-miR-513a1_......685
MIMAT0005767mml-miR-513b1_......685
MIMAT0005760ssy-miR-513a1_......685
MIMAT0005759ssy-miR-513b1_......685
MIMAT0005749age-miR-513d1_......685
MIMAT0005748age-miR-513a1_......685
MIMAT0005746age-miR-513b1_......685
MIMAT0020846dme-miR-954-3p1_......685
MIMAT0004951hsa-miR-887-3p6......_185
MIMAT0004177mdo-miR-27b-3p1_......685
MIMAT0004174mdo-miR-27a-3p1_......685
MIMAT0026660mdo-miR-124a-5p3......_885
MIMAT0003675xtr-miR-27c1_......685
MIMAT0003571xtr-miR-27b1_......685
MIMAT0003570xtr-miR-27a1_......685
MIMAT0003546bta-miR-27b1_......685
MIMAT0003532bta-miR-27a-3p1_......685
MIMAT0003078tni-miR-27c1_......685
MIMAT0003077fru-miR-27c1_......685
MIMAT0003068tni-miR-27e1_......685
MIMAT0003067fru-miR-27e1_......685
MIMAT0002952tni-miR-27b1_......685
MIMAT0002951fru-miR-27b1_......685
MIMAT0002877hsa-miR-513a-5p1_......685
MIMAT0002757mne-miR-27a1_......685
MIMAT0002755sla-miR-27a1_......685
MIMAT0002753mml-miR-27a-3p1_......685
MIMAT0002750ptr-miR-27a1_......685
MIMAT0002748ppy-miR-27a1_......685
MIMAT0002746lca-miR-27a1_......685
MIMAT0002744ppa-miR-27a1_......685
MIMAT0002742age-miR-27a1_......685
MIMAT0002739ggo-miR-27a1_......685
MIMAT0002148ssc-miR-27a1_......685
MIMAT0001800dre-miR-27e1_......685
MIMAT0001799dre-miR-27d1_......685
MIMAT0001798dre-miR-27c-3p1_......685
MIMAT0001797dre-miR-27b-3p1_......685
MIMAT0001796dre-miR-27a-3p1_......685
MIMAT0001187gga-miR-27b-3p1_......685
MIMAT0000799rno-miR-27a-3p1_......685
MIMAT0000798rno-miR-27b-3p1_......685
MIMAT0000605mmu-miR-350-3p1_......685
MIMAT0000604rno-miR-3501_......685
MIMAT0000537mmu-miR-27a-3p1_......685
MIMAT0004593hsa-miR-130a-5p1_......685
MIMAT0000419hsa-miR-27b-3p1_......685
MIMAT0016989mmu-miR-146a-3p8_......385
MIMAT0000126mmu-miR-27b-3p1_......685
MIMAT0000084hsa-miR-27a-3p1_......685