Result for your query miRNA sequence
>hsv1-miR-55593
guucacca

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gttcacca8
MIMAT0036035chi-miR-197-3p1_.......787
MIMAT0030816prd-miR-7950b-5p1......._787
MIMAT0024180ggo-miR-1971_.......787
MIMAT0022371mmu-miR-5622-5p1_.......787
MIMAT0012959eca-miR-1971_.......787
MIMAT0009257bta-miR-1971_.......787
MIMAT0007775osa-miR1854-5p7_.......187
MIMAT0006698cfa-miR-1971_.......787
MIMAT0006230mml-miR-197-3p1_.......787
MIMAT0005160ppt-miR1046-3p7_.......187
MIMAT0002604ppa-miR-1971_.......787
MIMAT0002603age-miR-1971_.......787
MIMAT0002602mne-miR-1971_.......787
MIMAT0002601ppy-miR-1971_.......787
MIMAT0002600ptr-miR-1971_.......787
MIMAT0000227hsa-miR-197-3p1_.......787
MIMAT0032908ppc-miR-8231-5p8......g.187
MIMAT0019187rlcv-miR-rL1-19-3p1.a......887
MIMAT0005964osa-miR14308.c......187
MIMAT0005547mcmv-miR-M55-18.a......187
MIMAT0037044ssc-miR-9826-5p6_......_175
MIMAT0036218chi-miR-412-3p3_......_875
MIMAT0035557dvi-miR-1010-3p2_......_775
MIMAT0035355gsa-miR-9403-3p8__......375
MIMAT0035181efu-miR-93641__......675
MIMAT0035050efu-miR-93231__......675
MIMAT0034900efu-miR-27b1......__675
MIMAT0034788efu-miR-92026__......175
MIMAT0034037gra-miR86667__......275
MIMAT0033618sma-miR-124b-5p3_......_875
MIMAT0033453str-miR-8392-3p1_......_675
MIMAT0033433str-miR-8386-3p1_......_675
MIMAT0033376str-miR-1175-5p7_......_275
MIMAT0033037ppc-miR-2238k-5p3......__875
MIMAT0032940ppc-miR-2238i-5p3......__875
MIMAT0032930ppc-miR-2238h-5p3......__875
MIMAT0032894ppc-miR-2238g-5p3......__875
MIMAT0032856ppc-miR-2238f-5p3......__875
MIMAT0031694bbe-miR-4868c-3p7__......275
MIMAT0031624bbe-miR-2062-3p8__......375
MIMAT0030430hsa-miR-7855-5p7__......275
MIMAT0029868mmu-miR-7677-5p8__......375
MIMAT0029373lja-miR75467__......275
MIMAT0029145ghr-miR74987__......275
MIMAT0029004oan-miR-7427-5p6__......175
MIMAT0028686mdo-miR-7339-5p2......__775
MIMAT0028559mdo-miR-7288-3p1__......675
MIMAT0028524mdo-miR-7275-5p3_......_875
MIMAT0028474mdo-miR-7254-5p1__......675
MIMAT0028006mmu-miR-7051-5p1__......675
MIMAT0027753mmu-miR-6926-3p1__......675
MIMAT0027701mmu-miR-6900-3p6__......175
MIMAT0027505hsa-miR-6802-3p1_......_675
MIMAT0027409hsa-miR-6754-3p3_......_875
MIMAT0025848hsa-miR-6511b-3p3__......875
MIMAT0025791gga-miR-6685-3p6__......175
MIMAT0025599gga-miR-124c-5p3_......_875
MIMAT0025479hsa-miR-6511a-3p3__......875
MIMAT0025124mmu-miR-63783......__875
MIMAT0025054rno-miR-63176......__175
MIMAT0024846rno-miR-3068-3p6_......_175
MIMAT0024559cca-miR6108f8__......375
MIMAT0024204ggo-miR-8876......__175
MIMAT0023665ame-miR-60437__......275
MIMAT0026457tur-miR-124-2-5p3......__875
MIMAT0022467gma-miR56797__......275
MIMAT0022311cel-miR-356b-5p6__......175
MIMAT0021574asu-miR-5356b-5p3......__875
MIMAT0020710bdi-miR166g-3p8__......375
MIMAT0020651rgl-miR51408__......375
MIMAT0020603hsa-miR-50963_......_875
MIMAT0020106bfl-miR-4868c-5p7__......275
MIMAT0019593pma-miR-45618__......375
MIMAT0019330oar-miR-412-5p2_......_775
MIMAT0016851hsa-miR-42998__......375
MIMAT0016394cin-miR-3575-5p2__......775
MIMAT0017809rno-miR-3551-5p3_......_875
MIMAT0016348ahy-miR35216__......175
MIMAT0016162ppy-miR-12261__......675
MIMAT0016122ppy-miR-8876......__175
MIMAT0015879ppy-miR-4123_......_875
MIMAT0014843mmu-miR-3068-3p6_......_175
MIMAT0014788api-miR-30487......__275
MIMAT0013824osa-miR28748......__375
MIMAT0013155eca-miR-4121_......_675
MIMAT0013646bmo-miR-2768-5p7_......_275
MIMAT0012471dsi-miR-965-5p8_......_375
MIMAT0012464dsi-miR-1010-3p2_......_775
MIMAT0012274dps-miR-1010-3p2_......_775
MIMAT0010203hsv2-miR-H4-5p3......__875
MIMAT0019169bfl-miR-2062-3p8__......375
MIMAT0009313bta-miR-4123_......_875
MIMAT0008330ptr-miR-8876......__175
MIMAT0008139ptr-miR-4123_......_875
MIMAT0007906bmo-miR-317-3p7......__275
MIMAT0006526mml-miR-8876......__175
MIMAT0006318mml-miR-412-3p3_......_875
MIMAT0007665gga-miR-17581__......675
MIMAT0007662gga-miR-17558_......_375
MIMAT0007535gga-miR-16561__......675
MIMAT0007446gga-miR-13548__......375
MIMAT0015263cin-miR-200-5p1__......675
MIMAT0007275oan-miR-1417-3p3_......_875
MIMAT0005861mml-miR-12401__......675
MIMAT0005579mml-miR-12261__......675
MIMAT0005578ptr-miR-12261__......675
MIMAT0005577hsa-miR-1226-3p1__......675
MIMAT0005536mcmv-miR-m01-3-5p7_......_275
MIMAT0005274smo-miR1115-3p1__......675
MIMAT0005029dme-miR-1016-3p1_......_675
MIMAT0005023dme-miR-1010-3p2_......_775
MIMAT0005508dme-miR-990-5p2_......_775
MIMAT0020873dme-miR-976-5p8__......375
MIMAT0004951hsa-miR-887-3p6......__175
MIMAT0026660mdo-miR-124a-5p3......__875
MIMAT0003124rno-miR-412-3p2_......_775
MIMAT0026585mml-miR-124a-5p1......__675
MIMAT0002170hsa-miR-412-3p3_......_875
MIMAT0001575hcmv-miR-UL22A-3p1__......675
MIMAT0026511gga-miR-124a-5p1......__675
MIMAT0001094mmu-miR-412-3p1_......_675
MIMAT0020917osa-miR169i-5p.26__......175