VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hcmv-miR-us22-5p6
guuucag

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gtttcag`	7
MIMAT0037046	ssc-miR-9828-3p	2	`.......`	8	100
MIMAT0028684	mdo-miR-7338-5p	2	`.......`	8	100
MIMAT0028165	hcmv-miR-US22-5p	2	`.......`	8	100
MIMAT0025713	gga-miR-6617-3p	2	`.......`	8	100
MIMAT0024552	cca-miR6113	8	`.......`	2	100
MIMAT0023186	gma-miR5781	7	`.......`	1	100
MIMAT0014946	mmu-miR-3074-2-3p	2	`.......`	8	100
MIMAT0005205	ppt-miR1075	2	`.......`	8	100
MIMAT0036896	oha-miR-30d-3p	2	`_......`	7	85
MIMAT0036889	oha-miR-30a-3p	2	`_......`	7	85
MIMAT0036887	oha-miR-30e-3p	2	`_......`	7	85
MIMAT0036816	oha-miR-205a-3p	3	`_......`	8	85
MIMAT0036358	gma-miR9738	6	`......_`	1	85
MIMAT0036255	chi-miR-494	6	`......_`	1	85
MIMAT0036129	chi-miR-30e-3p	2	`_......`	7	85
MIMAT0036127	chi-miR-30d-3p	1	`_......`	6	85
MIMAT0036122	chi-miR-30a-3p	2	`_......`	7	85
MIMAT0035761	tae-miR9654a-3p	8	`_......`	3	85
MIMAT0035578	dvi-miR-957-3p	6	`......_`	1	85
MIMAT0035449	sly-miR9472-5p	1	`_......`	6	85
MIMAT0035363	bol-miR9408	1	`......_`	6	85
MIMAT0035136	efu-miR-30e	3	`_......`	8	85
MIMAT0035071	efu-miR-30d	2	`_......`	7	85
MIMAT0035028	efu-miR-494	6	`......_`	1	85
MIMAT0034973	efu-miR-30a	3	`_......`	8	85
MIMAT0034857	efu-miR-9241	8	`......_`	3	85
MIMAT0034790	efu-miR-9188b	8	`_......`	3	85
MIMAT0034437	eca-miR-8909	7	`_......`	2	85
MIMAT0034006	gra-miR8648	1	`_......`	6	85
MIMAT0033573	sma-miR-8434-3p	1	`......_`	6	85
MIMAT0033492	str-miR-8399-5p	1	`_......`	6	85
MIMAT0033278	ppc-miR-8358-5p	3	`_......`	8	85
MIMAT0033185	ppc-miR-8322-3p	6	`_......`	1	85
MIMAT0033055	ppc-miR-8278-5p	3	`......_`	8	85
MIMAT0032830	cel-miR-8206-3p	1	`_......`	6	85
MIMAT0032610	ssa-miR-30d-2-3p	2	`_......`	7	85
MIMAT0032609	ssa-miR-30d-3p	2	`_......`	7	85
MIMAT0032607	ssa-miR-30c-3p	2	`_......`	7	85
MIMAT0032605	ssa-miR-30b-3p	2	`_......`	7	85
MIMAT0032498	ssa-miR-205b-3-3p	3	`_......`	8	85
MIMAT0032497	ssa-miR-205b-2-3p	3	`_......`	8	85
MIMAT0032496	ssa-miR-205b-1-3p	3	`_......`	8	85
MIMAT0031558	ppe-miR8131-5p	2	`_......`	7	85
MIMAT0031225	stu-miR8046-3p	8	`_......`	3	85
MIMAT0031198	stu-miR8015-3p	1	`......_`	6	85
MIMAT0030659	prd-miR-7914-3p	6	`_......`	1	85
MIMAT0030172	bdi-miR7723a-5p	6	`......_`	1	85
MIMAT0030056	oar-miR-30a-3p	2	`_......`	7	85
MIMAT0032228	lva-miR-2007-5p	3	`_......`	8	85
MIMAT0032181	pmi-miR-2007-5p	3	`_......`	8	85
MIMAT0029677	cbn-miR-7634	1	`......_`	6	85
MIMAT0029562	ipu-miR-7563c	1	`_......`	6	85
MIMAT0029500	ipu-miR-30e	2	`_......`	7	85
MIMAT0029499	ipu-miR-30d	2	`_......`	7	85
MIMAT0029496	ipu-miR-30a	2	`_......`	7	85
MIMAT0029151	ghr-miR7504a	8	`......_`	3	85
MIMAT0028623	mdo-miR-30d-3p	1	`_......`	6	85
MIMAT0028423	mmu-miR-7227-3p	7	`_......`	2	85
MIMAT0028238	mml-miR-4766-5p	7	`_......`	2	85
MIMAT0026371	bma-miR-5872	1	`_......`	6	85
MIMAT0027870	mmu-miR-6984-5p	7	`_......`	2	85
MIMAT0025799	gga-miR-6693-3p	2	`_......`	7	85
MIMAT0027339	mmu-miR-6481	8	`_......`	3	85
MIMAT0024284	ggo-miR-4738	6	`......_`	1	85
MIMAT0024160	ggo-miR-494	6	`......_`	1	85
MIMAT0023901	cgr-miR-30e-3p	2	`_......`	7	85
MIMAT0023899	cgr-miR-30d	2	`_......`	7	85
MIMAT0023895	cgr-miR-30a-3p	2	`_......`	7	85
MIMAT0023520	ath-miR5997	6	`......_`	1	85
MIMAT0023359	hco-miR-5905	7	`_......`	2	85
MIMAT0022667	ola-miR-30a-3p	2	`_......`	7	85
MIMAT0022600	ola-miR-30d-3p	2	`_......`	7	85
MIMAT0022597	ola-miR-30e	2	`_......`	7	85
MIMAT0022333	cin-miR-5604-5p	3	`......_`	8	85
MIMAT0022164	osa-miR5529	1	`......_`	6	85
MIMAT0021929	aca-miR-30e-3p	2	`_......`	7	85
MIMAT0021927	aca-miR-30d-3p	1	`_......`	6	85
MIMAT0021921	aca-miR-30a-3p	2	`_......`	7	85
MIMAT0020603	hsa-miR-5096	1	`......_`	6	85
MIMAT0020023	sko-miR-2007-5p	3	`_......`	8	85
MIMAT0019917	hsa-miR-4766-5p	7	`_......`	2	85
MIMAT0019867	hsa-miR-4738-3p	6	`......_`	1	85
MIMAT0019429	pma-miR-30e-3p	2	`_......`	7	85
MIMAT0019426	pma-miR-30c-3p	1	`_......`	6	85
MIMAT0019268	oar-miR-494-3p	6	`......_`	1	85
MIMAT0019230	hsa-miR-3942-3p	1	`_......`	6	85
MIMAT0018813	tca-miR-3864-3p	6	`......_`	1	85
MIMAT0018783	tca-miR-3858-3p	6	`......_`	1	85
MIMAT0017924	aly-miR4235	7	`_......`	2	85
MIMAT0016743	cin-miR-4142-3p	2	`_......`	7	85
MIMAT0016736	cin-miR-4139-5p	8	`_......`	3	85
MIMAT0016442	cin-miR-4000i-5p	6	`......_`	1	85
MIMAT0016440	cin-miR-4000h-5p	6	`......_`	1	85
MIMAT0016438	cin-miR-4000g-5p	6	`......_`	1	85
MIMAT0016436	cin-miR-4000f-5p	6	`......_`	1	85
MIMAT0016434	cin-miR-4000e-5p	6	`......_`	1	85
MIMAT0016432	cin-miR-4000b-5p	6	`......_`	1	85
MIMAT0016428	cin-miR-4000d-5p	6	`......_`	1	85
MIMAT0016426	cin-miR-4000c-5p	6	`......_`	1	85
MIMAT0015915	ppy-miR-494	6	`......_`	1	85
MIMAT0014613	tgu-miR-30d-3p	1	`_......`	6	85
MIMAT0014651	tgu-miR-29b-2-5p	3	`......_`	8	85
MIMAT0014535	tgu-miR-30a-3p	2	`_......`	7	85
MIMAT0014629	tgu-miR-30b-3p	2	`_......`	7	85
MIMAT0014369	cqu-miR-957	6	`......_`	1	85
MIMAT0014248	aae-miR-957	6	`......_`	1	85
MIMAT0013873	ssc-miR-30e-3p	2	`_......`	7	85
MIMAT0013164	eca-miR-494	6	`......_`	1	85
MIMAT0013628	bmo-miR-2757-3p	6	`_......`	1	85
MIMAT0012498	dsi-miR-957	6	`......_`	1	85
MIMAT0012230	dps-miR-957-3p	6	`......_`	1	85
MIMAT0011826	bta-miR-2311	8	`_......`	3	85
MIMAT0015300	ssc-miR-30a-3p	2	`_......`	7	85
MIMAT0010106	aga-miR-957	6	`......_`	1	85
MIMAT0009905	cfa-miR-494	6	`......_`	1	85
MIMAT0009805	nve-miR-2041a-3p	6	`......_`	1	85
MIMAT0009748	spu-miR-2007	3	`_......`	8	85
MIMAT0009334	bta-miR-494	6	`......_`	1	85
MIMAT0008168	ptr-miR-494	6	`......_`	1	85
MIMAT0006627	cfa-miR-30e	2	`_......`	7	85
MIMAT0006356	mml-miR-494-3p	6	`......_`	1	85
MIMAT0026807	mml-miR-30e-3p	1	`_......`	6	85
MIMAT0026806	mml-miR-30d-3p	1	`_......`	6	85
MIMAT0006037	odi-miR-1484	6	`......_`	1	85
MIMAT0007343	gga-miR-1465	1	`_......`	6	85
MIMAT0007204	oan-miR-30e-3p	2	`_......`	7	85
MIMAT0007042	oan-miR-30d-3p	2	`_......`	7	85
MIMAT0006914	oan-miR-30a-3p	2	`_......`	7	85
MIMAT0006867	oan-miR-205-3p	3	`_......`	8	85
MIMAT0006795	oan-miR-1326	7	`_......`	2	85
MIMAT0005470	dme-miR-957-3p	6	`......_`	1	85
MIMAT0004938	mmu-miR-875-3p	7	`_......`	2	85
MIMAT0026652	mdo-miR-30a-3p	1	`_......`	6	85
MIMAT0003575	xtr-miR-30a-3p	2	`_......`	7	85
MIMAT0003474	mmu-miR-694	6	`_......`	1	85
MIMAT0003448	rlcv-miR-rL1-16-3p	8	`......_`	3	85
MIMAT0003193	rno-miR-494-3p	6	`......_`	1	85
MIMAT0003182	mmu-miR-494-3p	6	`......_`	1	85
MIMAT0026613	hsa-miR-510-3p	8	`......_`	3	85
MIMAT0002816	hsa-miR-494-3p	6	`......_`	1	85
MIMAT0002378	ppa-miR-30a-3p	2	`_......`	7	85
MIMAT0002376	ppy-miR-30a-3p	2	`_......`	7	85
MIMAT0002374	ggo-miR-30a-3p	2	`_......`	7	85
MIMAT0002372	ptr-miR-30a-3p	2	`_......`	7	85
MIMAT0002370	mml-miR-30a-3p	2	`_......`	7	85
MIMAT0003402	dre-miR-30e-3p	2	`_......`	7	85
MIMAT0031951	dre-miR-30a-3p	2	`_......`	7	85
MIMAT0001569	mghv-miR-M1-6-3p	6	`......_`	1	85
MIMAT0031925	dre-miR-205-3p	3	`_......`	8	85
MIMAT0026538	gga-miR-30e-3p	1	`_......`	6	85
MIMAT0001136	gga-miR-30a-3p	2	`_......`	7	85
MIMAT0000809	rno-miR-30a-3p	2	`_......`	7	85
MIMAT0004722	rno-miR-30d-3p	2	`_......`	7	85
MIMAT0004720	rno-miR-30e-3p	2	`_......`	7	85
MIMAT0000693	hsa-miR-30e-3p	2	`_......`	7	85
MIMAT0017011	mmu-miR-30d-3p	2	`_......`	7	85
MIMAT0009197	hsa-miR-205-3p	3	`_......`	8	85
MIMAT0000249	mmu-miR-30e-3p	2	`_......`	7	85
MIMAT0004551	hsa-miR-30d-3p	2	`_......`	7	85
MIMAT0017003	mmu-miR-205-3p	3	`_......`	8	85
MIMAT0000129	mmu-miR-30a-3p	2	`_......`	7	85
MIMAT0000088	hsa-miR-30a-3p	2	`_......`	7	85