RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | gttttctc | 8 | ||
MIMAT0034629 | eca-miR-9084 | 2 | ......._ | 8 | 87 |
MIMAT0033872 | atr-miR8586 | 1 | _....... | 7 | 87 |
MIMAT0031377 | osa-miR5539b | 8 | ......._ | 2 | 87 |
MIMAT0028396 | mmu-miR-7214-5p | 2 | ......._ | 8 | 87 |
MIMAT0023111 | tur-miR-5738-3p | 1 | _....... | 7 | 87 |
MIMAT0022175 | osa-miR5539a | 8 | ......._ | 2 | 87 |
MIMAT0021603 | gma-miR5369 | 8 | _....... | 2 | 87 |
MIMAT0020155 | dme-miR-4945-5p | 1 | _....... | 7 | 87 |
MIMAT0019578 | pma-miR-4547-5p | 2 | ......._ | 8 | 87 |
MIMAT0018308 | gma-miR4393a | 8 | _....... | 2 | 87 |
MIMAT0018678 | tca-miR-3825-5p | 2 | ......._ | 8 | 87 |
MIMAT0016558 | cin-miR-4034-3p | 2 | _....... | 8 | 87 |
MIMAT0012865 | hvt-miR-H13 | 1 | _....... | 7 | 87 |
MIMAT0007793 | osa-miR1860-5p | 7 | ......._ | 1 | 87 |
MIMAT0005979 | mdv1-miR-M9-5p | 1 | _....... | 7 | 87 |
MIMAT0006896 | oan-miR-1422k-3p | 7 | ......._ | 1 | 87 |
MIMAT0006892 | oan-miR-1422c-3p | 7 | ......._ | 1 | 87 |
MIMAT0004474 | mdv2-miR-M28-5p | 1 | _....... | 7 | 87 |
MIMAT0004458 | mdv2-miR-M18-5p | 2 | ......._ | 8 | 87 |
MIMAT0027875 | mmu-miR-6986-3p | 1 | ......a. | 8 | 87 |
MIMAT0027337 | ptc-miR6468-5p | 1 | ......c. | 8 | 87 |
MIMAT0037004 | ssc-miR-9787-3p | 7 | __...... | 2 | 75 |
MIMAT0036614 | tch-miR-9771o | 6 | _......_ | 1 | 75 |
MIMAT0036557 | tch-miR-9771j | 6 | _......_ | 1 | 75 |
MIMAT0035426 | nve-miR-9467 | 3 | _......_ | 8 | 75 |
MIMAT0035407 | nve-miR-9446 | 3 | _......_ | 8 | 75 |
MIMAT0035362 | xtr-miR-428b | 6 | __...... | 1 | 75 |
MIMAT0034559 | eca-miR-9018 | 2 | _......_ | 7 | 75 |
MIMAT0034241 | gra-miR8787 | 1 | _......_ | 6 | 75 |
MIMAT0034227 | gra-miR7504m | 1 | __...... | 6 | 75 |
MIMAT0034226 | gra-miR7504l | 1 | __...... | 6 | 75 |
MIMAT0034225 | gra-miR7504k | 1 | __...... | 6 | 75 |
MIMAT0034068 | gra-miR7504f | 8 | __...... | 3 | 75 |
MIMAT0034067 | gra-miR7504e | 8 | __...... | 3 | 75 |
MIMAT0034044 | gra-miR8672 | 8 | __...... | 3 | 75 |
MIMAT0034027 | gra-miR7504c | 8 | __...... | 3 | 75 |
MIMAT0033899 | atr-miR8608 | 1 | _......_ | 6 | 75 |
MIMAT0033550 | sma-miR-8423-5p | 1 | _......_ | 6 | 75 |
MIMAT0033517 | sma-miR-8406-3p | 1 | _......_ | 6 | 75 |
MIMAT0030786 | prd-miR-124-5p | 3 | ......__ | 8 | 75 |
MIMAT0030682 | prd-miR-7920-5p | 2 | ......__ | 7 | 75 |
MIMAT0030383 | ptc-miR7824 | 8 | __...... | 3 | 75 |
MIMAT0030367 | hhi-miR-737 | 6 | _......_ | 1 | 75 |
MIMAT0030206 | bdi-miR7735-5p | 3 | ......__ | 8 | 75 |
MIMAT0030192 | bdi-miR7729b-5p | 2 | ......__ | 7 | 75 |
MIMAT0030190 | bdi-miR7729a-5p | 2 | ......__ | 7 | 75 |
MIMAT0030183 | bdi-miR7725b-3p.1 | 7 | ......__ | 2 | 75 |
MIMAT0030153 | bdi-miR7715-3p | 8 | _......_ | 3 | 75 |
MIMAT0030150 | bdi-miR7714-5p | 3 | _......_ | 8 | 75 |
MIMAT0029155 | ghr-miR7508 | 8 | _......_ | 3 | 75 |
MIMAT0028755 | mdo-miR-1544d-3p | 3 | _......_ | 8 | 75 |
MIMAT0031034 | mdo-miR-1544e-3p | 3 | _......_ | 8 | 75 |
MIMAT0028747 | mdo-miR-1544c-3p | 3 | _......_ | 8 | 75 |
MIMAT0028745 | mdo-miR-1544b-3p | 3 | _......_ | 8 | 75 |
MIMAT0028436 | mmu-miR-7234-5p | 3 | ......__ | 8 | 75 |
MIMAT0026435 | sbi-miR6229-3p | 3 | _......_ | 8 | 75 |
MIMAT0027693 | mmu-miR-6896-3p | 1 | __...... | 6 | 75 |
MIMAT0027567 | hsa-miR-6833-3p | 1 | __...... | 6 | 75 |
MIMAT0025816 | gga-miR-6706-5p | 8 | __...... | 3 | 75 |
MIMAT0025658 | gga-miR-6575-3p | 3 | ......__ | 8 | 75 |
MIMAT0025087 | mmu-miR-6344 | 1 | ......__ | 6 | 75 |
MIMAT0027275 | ppe-miR6259 | 7 | _......_ | 2 | 75 |
MIMAT0024777 | nta-miR6162 | 6 | _......_ | 1 | 75 |
MIMAT0024583 | bta-miR-2285h | 6 | ......__ | 1 | 75 |
MIMAT0024538 | cca-miR6105a | 8 | ......__ | 3 | 75 |
MIMAT0024507 | mse-miR-6099 | 7 | __...... | 2 | 75 |
MIMAT0023554 | ame-miR-6006-3p | 2 | _......_ | 7 | 75 |
MIMAT0023390 | hco-miR-5917 | 6 | ......__ | 1 | 75 |
MIMAT0022468 | hsa-miR-5680 | 6 | __...... | 1 | 75 |
MIMAT0022334 | cin-miR-5604-3p | 1 | __...... | 6 | 75 |
MIMAT0022218 | mtr-miR2592bn-3p | 7 | ......__ | 2 | 75 |
MIMAT0022214 | mtr-miR2592bm-3p | 7 | ......__ | 2 | 75 |
MIMAT0021558 | asu-miR-5350d-5p | 3 | __...... | 8 | 75 |
MIMAT0021552 | asu-miR-5350a-5p | 3 | __...... | 8 | 75 |
MIMAT0020508 | dme-miR-4915-5p | 8 | __...... | 3 | 75 |
MIMAT0020468 | bfl-miR-4882c | 8 | __...... | 3 | 75 |
MIMAT0020467 | bfl-miR-4882b | 7 | __...... | 2 | 75 |
MIMAT0020466 | bfl-miR-4882a | 7 | __...... | 2 | 75 |
MIMAT0018946 | hsa-miR-548ad-3p | 6 | ......__ | 1 | 75 |
MIMAT0018596 | ame-miR-3729 | 2 | ......__ | 7 | 75 |
MIMAT0018539 | ame-miR-3765 | 8 | _......_ | 3 | 75 |
MIMAT0017945 | ath-miR3440b-5p | 1 | _......_ | 6 | 75 |
MIMAT0016832 | cin-miR-4211-5p | 8 | _......_ | 3 | 75 |
MIMAT0016501 | cin-miR-4009a-5p | 2 | ......__ | 7 | 75 |
MIMAT0015989 | ppy-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0017655 | aly-miR868-5p | 2 | __...... | 7 | 75 |
MIMAT0017622 | aly-miR838-3p | 1 | _......_ | 6 | 75 |
MIMAT0015442 | bmo-miR-3258 | 6 | ......__ | 1 | 75 |
MIMAT0013167 | eca-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0012930 | eca-miR-684 | 2 | ......__ | 7 | 75 |
MIMAT0012804 | ptr-miR-570 | 7 | ......__ | 2 | 75 |
MIMAT0012721 | hvt-miR-H9-5p | 1 | __...... | 6 | 75 |
MIMAT0013684 | bmo-miR-2787-3p | 7 | __...... | 2 | 75 |
MIMAT0013369 | mtr-miR2629g | 2 | ......__ | 7 | 75 |
MIMAT0013368 | mtr-miR2629f | 2 | ......__ | 7 | 75 |
MIMAT0013367 | mtr-miR2629c | 2 | ......__ | 7 | 75 |
MIMAT0013366 | mtr-miR2629b | 2 | ......__ | 7 | 75 |
MIMAT0013365 | mtr-miR2629e | 2 | ......__ | 7 | 75 |
MIMAT0013364 | mtr-miR2629d | 2 | ......__ | 7 | 75 |
MIMAT0013363 | mtr-miR2629a | 2 | ......__ | 7 | 75 |
MIMAT0011569 | crm-miR-81-5p | 3 | ......__ | 8 | 75 |
MIMAT0011406 | sme-miR-2147d-5p | 8 | ......__ | 3 | 75 |
MIMAT0011270 | sme-miR-2147c | 8 | ......__ | 3 | 75 |
MIMAT0011265 | sme-miR-2147b | 8 | ......__ | 3 | 75 |
MIMAT0009909 | cfa-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0009342 | bta-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0008214 | ptr-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0015266 | cel-miR-1822-5p | 3 | __...... | 8 | 75 |
MIMAT0006405 | mml-miR-539 | 7 | __...... | 2 | 75 |
MIMAT0007714 | gga-miR-1798-3p | 3 | ......__ | 8 | 75 |
MIMAT0026768 | mdo-miR-1544a-3p | 3 | _......_ | 8 | 75 |
MIMAT0007317 | oan-miR-1422q-3p | 6 | ......__ | 1 | 75 |
MIMAT0007094 | oan-miR-1422d-3p | 7 | ......__ | 2 | 75 |
MIMAT0006886 | oan-miR-1422b-3p | 6 | _......_ | 1 | 75 |
MIMAT0006882 | oan-miR-1422e-3p | 7 | ......__ | 2 | 75 |
MIMAT0006880 | oan-miR-1422a-3p | 7 | _......_ | 2 | 75 |
MIMAT0006862 | oan-miR-1339-3p | 7 | ......__ | 2 | 75 |
MIMAT0005113 | ppt-miR1026b | 7 | __...... | 2 | 75 |
MIMAT0005112 | ppt-miR1026a | 7 | __...... | 2 | 75 |
MIMAT0004260 | ath-miR838 | 1 | _......_ | 6 | 75 |
MIMAT0020352 | cel-miR-794-3p | 7 | ......__ | 2 | 75 |
MIMAT0003496 | mmu-miR-706 | 7 | __...... | 2 | 75 |
MIMAT0003462 | mmu-miR-684 | 2 | ......__ | 7 | 75 |
MIMAT0026623 | hsa-miR-627-3p | 3 | _......_ | 8 | 75 |
MIMAT0003235 | hsa-miR-570-3p | 7 | ......__ | 2 | 75 |
MIMAT0003176 | rno-miR-539-5p | 7 | __...... | 2 | 75 |
MIMAT0003169 | mmu-miR-539-5p | 7 | __...... | 2 | 75 |
MIMAT0003163 | hsa-miR-539-5p | 7 | __...... | 2 | 75 |
MIMAT0001000 | ebv-miR-BART2-5p | 3 | _......_ | 8 | 75 |
MIMAT0015119 | cel-miR-247-5p | 8 | __...... | 3 | 75 |
MIMAT0020323 | cel-miR-82-5p | 3 | ......__ | 8 | 75 |
MIMAT0015109 | cel-miR-81-5p | 3 | ......__ | 8 | 75 |