RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | taaagcct | 8 | ||
MIMAT0034617 | eca-miR-9072 | 1 | ........ | 8 | 100 |
MIMAT0014481 | tgu-miR-2971 | 1 | ........ | 8 | 100 |
MIMAT0034471 | eca-miR-8942 | 8 | _....... | 2 | 87 |
MIMAT0032684 | ssa-miR-736-5p | 7 | _....... | 1 | 87 |
MIMAT0022445 | ath-miR5643b | 7 | _....... | 1 | 87 |
MIMAT0022404 | ath-miR5643a | 7 | _....... | 1 | 87 |
MIMAT0019369 | pma-miR-1d | 8 | ......._ | 2 | 87 |
MIMAT0017916 | aly-miR4228 | 1 | _....... | 7 | 87 |
MIMAT0014864 | mmu-miR-3078-5p | 2 | _....... | 8 | 87 |
MIMAT0012086 | sme-bantam-c-5p | 8 | _....... | 2 | 87 |
MIMAT0033582 | sma-miR-8439-5p | 8 | ......g. | 1 | 87 |
MIMAT0018519 | ame-miR-3750 | 1 | ......t. | 8 | 87 |
MIMAT0014381 | cqu-miR-9-3p | 1 | ......t. | 8 | 87 |
MIMAT0014213 | aae-miR-9c-3p | 1 | ......t. | 8 | 87 |
MIMAT0012363 | dps-miR-2551-3p | 1 | ......t. | 8 | 87 |
MIMAT0012168 | sme-miR-753e-5p | 8 | .c...... | 1 | 87 |
MIMAT0011395 | sme-miR-753b-5p | 8 | .c...... | 1 | 87 |
MIMAT0032054 | dvi-miR-9c-3p | 1 | ......t. | 8 | 87 |
MIMAT0020828 | dme-miR-9c-3p | 1 | ......t. | 8 | 87 |
MIMAT0037138 | ata-miR5200-5p | 1 | __...... | 6 | 75 |
MIMAT0036308 | chi-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0035457 | sly-miR167b-5p | 1 | ......__ | 6 | 75 |
MIMAT0035392 | nve-miR-9424b | 1 | ......__ | 6 | 75 |
MIMAT0034938 | efu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0034506 | eca-miR-8969 | 8 | _......_ | 3 | 75 |
MIMAT0033933 | atr-miR390.1 | 1 | ......__ | 6 | 75 |
MIMAT0033776 | pxy-miR-9a | 1 | ......__ | 6 | 75 |
MIMAT0033381 | str-miR-8372-3p | 2 | ......__ | 7 | 75 |
MIMAT0032929 | ppc-miR-8237-3p | 2 | ......__ | 7 | 75 |
MIMAT0032875 | ppc-miR-8220-3p | 2 | ......__ | 7 | 75 |
MIMAT0032731 | ssa-miR-9b-3p | 1 | ......__ | 6 | 75 |
MIMAT0032729 | ssa-miR-9a-8-3p | 1 | ......__ | 6 | 75 |
MIMAT0032728 | ssa-miR-9a-7-3p | 1 | ......__ | 6 | 75 |
MIMAT0032727 | ssa-miR-9a-6-3p | 1 | ......__ | 6 | 75 |
MIMAT0032726 | ssa-miR-9a-5-3p | 2 | ......__ | 7 | 75 |
MIMAT0032725 | ssa-miR-9a-4-3p | 2 | ......__ | 7 | 75 |
MIMAT0032724 | ssa-miR-9a-3-3p | 1 | ......__ | 6 | 75 |
MIMAT0032723 | ssa-miR-9a-2-3p | 1 | ......__ | 6 | 75 |
MIMAT0032722 | ssa-miR-9a-1-3p | 1 | ......__ | 6 | 75 |
MIMAT0031727 | bbe-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0031541 | ppe-miR477-3p | 3 | __...... | 8 | 75 |
MIMAT0030577 | prd-miR-9b-3p | 2 | ......__ | 7 | 75 |
MIMAT0030501 | prd-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0030267 | bdi-miR7760-3p | 6 | _......_ | 1 | 75 |
MIMAT0029748 | cbn-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0029747 | cbn-miR-75 | 2 | ......__ | 7 | 75 |
MIMAT0029072 | gga-miR-7459-5p | 6 | _......_ | 1 | 75 |
MIMAT0028701 | mdo-miR-1251-3p | 7 | ......__ | 2 | 75 |
MIMAT0028682 | mdo-miR-7337-5p | 1 | __...... | 6 | 75 |
MIMAT0028555 | mdo-miR-9b-3p | 1 | ......__ | 6 | 75 |
MIMAT0026422 | sbi-miR5568d-5p | 7 | _......_ | 2 | 75 |
MIMAT0026322 | ccr-miR-9-5p | 1 | ......__ | 6 | 75 |
MIMAT0028116 | hsa-miR-7109-3p | 2 | __...... | 7 | 75 |
MIMAT0027949 | mmu-miR-7022-3p | 3 | __...... | 8 | 75 |
MIMAT0027539 | hsa-miR-6819-3p | 1 | __...... | 6 | 75 |
MIMAT0025649 | gga-miR-6571-5p | 2 | ......__ | 7 | 75 |
MIMAT0025421 | pol-miR-9b-3p | 1 | ......__ | 6 | 75 |
MIMAT0025193 | ptc-miR6465 | 2 | ......__ | 7 | 75 |
MIMAT0024987 | hme-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0024476 | mse-miR-9b | 2 | ......__ | 7 | 75 |
MIMAT0024472 | mse-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0024401 | ppy-miR-3188 | 8 | __...... | 3 | 75 |
MIMAT0023582 | tca-miR-9e-3p | 2 | ......__ | 7 | 75 |
MIMAT0023326 | hco-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0023149 | mtr-miR5760 | 7 | ......__ | 2 | 75 |
MIMAT0022537 | ola-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0023083 | tur-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0023010 | bra-miR5713 | 6 | __...... | 1 | 75 |
MIMAT0022383 | mmu-miR-344h-5p | 7 | __...... | 2 | 75 |
MIMAT0021992 | aca-miR-9-3-3p | 1 | ......__ | 6 | 75 |
MIMAT0021991 | aca-miR-9-1-3p | 2 | ......__ | 7 | 75 |
MIMAT0021473 | asu-miR-79-3p | 2 | ......__ | 7 | 75 |
MIMAT0021432 | asu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0020522 | ath-miR5018 | 2 | ......__ | 7 | 75 |
MIMAT0019374 | pma-miR-9a-3p | 1 | ......__ | 6 | 75 |
MIMAT0018915 | smr-miR-282 | 1 | __...... | 6 | 75 |
MIMAT0018889 | tca-miR-3893-3p | 2 | ......__ | 7 | 75 |
MIMAT0018859 | tca-miR-3881-3p | 7 | ......__ | 2 | 75 |
MIMAT0018749 | tca-miR-9d-3p | 2 | ......__ | 7 | 75 |
MIMAT0018733 | tca-miR-3843-3p | 2 | ......__ | 7 | 75 |
MIMAT0018572 | ame-miR-9c | 1 | ......__ | 6 | 75 |
MIMAT0018515 | ame-miR-3747a | 8 | __...... | 3 | 75 |
MIMAT0016593 | cin-miR-4052-5p | 7 | __...... | 2 | 75 |
MIMAT0016038 | ppy-miR-596 | 1 | __...... | 6 | 75 |
MIMAT0015564 | bmo-miR-3374-3p | 7 | ......__ | 2 | 75 |
MIMAT0015451 | bmo-miR-3267a | 7 | _......_ | 2 | 75 |
MIMAT0015070 | hsa-miR-3188 | 8 | __...... | 3 | 75 |
MIMAT0019212 | hsa-miR-3160-5p | 6 | _......_ | 1 | 75 |
MIMAT0014981 | hsa-miR-3119 | 7 | _......_ | 2 | 75 |
MIMAT0014923 | mmu-miR-344e-5p | 7 | __...... | 2 | 75 |
MIMAT0014779 | api-miR-3041 | 2 | ......__ | 7 | 75 |
MIMAT0014627 | tgu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0014295 | aae-miR-79-3p | 1 | ......__ | 6 | 75 |
MIMAT0014108 | bma-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0012807 | ptr-miR-596 | 1 | __...... | 6 | 75 |
MIMAT0013632 | bmo-miR-2760-5p | 8 | __...... | 3 | 75 |
MIMAT0013620 | bmo-miR-9d | 2 | ......__ | 7 | 75 |
MIMAT0012705 | isc-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0012668 | dpu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0013588 | cte-miR-2719 | 7 | _......_ | 2 | 75 |
MIMAT0012298 | dps-miR-2513a | 1 | ......__ | 6 | 75 |
MIMAT0011652 | ppc-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0011556 | crm-miR-79-3p | 2 | ......__ | 7 | 75 |
MIMAT0011521 | crm-miR-75 | 2 | ......__ | 7 | 75 |
MIMAT0032104 | sma-bantam-5p | 7 | _......_ | 2 | 75 |
MIMAT0010147 | lmi-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0019177 | tca-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0009477 | bfl-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0009796 | nve-miR-2037-5p | 3 | _......_ | 8 | 75 |
MIMAT0009661 | spu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0009618 | sko-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0009572 | lgi-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0009554 | cte-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0012549 | bta-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0009124 | dya-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0009058 | dya-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0009049 | dwi-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008981 | dwi-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008975 | dvi-miR-79-3p | 1 | ......__ | 6 | 75 |
MIMAT0008956 | dvi-miR-4-3p | 2 | ......__ | 7 | 75 |
MIMAT0032057 | dvi-miR-9a-3p | 1 | ......__ | 6 | 75 |
MIMAT0008842 | dsi-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008835 | dse-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008769 | dse-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008751 | dpe-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008747 | dpe-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008690 | dmo-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008629 | dmo-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008594 | dgr-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008583 | dgr-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008532 | der-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0008525 | der-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008430 | dan-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0008427 | dan-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0019135 | tca-miR-9b-3p | 2 | ......__ | 7 | 75 |
MIMAT0007752 | gga-miR-762 | 8 | _......_ | 3 | 75 |
MIMAT0006775 | cel-miR-1833 | 8 | __...... | 3 | 75 |
MIMAT0026796 | mml-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0007628 | gga-miR-1728-3p | 6 | __...... | 1 | 75 |
MIMAT0032030 | gma-miR1512a-3p | 6 | ......__ | 1 | 75 |
MIMAT0007340 | gga-miR-1462-5p | 7 | _......_ | 2 | 75 |
MIMAT0026756 | oan-miR-1351-3p | 8 | _......_ | 3 | 75 |
MIMAT0006793 | oan-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0005333 | rno-miR-742-3p | 2 | _......_ | 7 | 75 |
MIMAT0005287 | rno-miR-879-5p | 8 | __...... | 3 | 75 |
MIMAT0005243 | smo-miR1090 | 3 | _......_ | 8 | 75 |
MIMAT0005231 | smo-miR1081 | 8 | __...... | 3 | 75 |
MIMAT0004433 | ame-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0003899 | ppt-miR477a-3p | 3 | __...... | 8 | 75 |
MIMAT0004842 | mmu-miR-879-5p | 8 | __...... | 3 | 75 |
MIMAT0004088 | mdo-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0004237 | mmu-miR-742-3p | 2 | _......_ | 7 | 75 |
MIMAT0004233 | cel-miR-798 | 2 | __...... | 7 | 75 |
MIMAT0003988 | sme-miR-79-3p | 2 | ......__ | 7 | 75 |
MIMAT0015225 | bmo-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0003650 | xtr-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0003556 | xtr-miR-9b-3p | 1 | ......__ | 6 | 75 |
MIMAT0003554 | xtr-miR-9a-3p | 1 | ......__ | 6 | 75 |
MIMAT0003375 | mmu-miR-302c-5p | 6 | ......__ | 1 | 75 |
MIMAT0003350 | gga-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0003264 | hsa-miR-596 | 1 | __...... | 6 | 75 |
MIMAT0031933 | dre-miR-9-7-3p | 1 | ......__ | 6 | 75 |
MIMAT0031932 | dre-miR-9-4-3p | 1 | ......__ | 6 | 75 |
MIMAT0003156 | dre-miR-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0001524 | aga-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0001224 | dps-miR-79 | 1 | ......__ | 6 | 75 |
MIMAT0001204 | dps-miR-4 | 2 | ......__ | 7 | 75 |
MIMAT0001046 | osa-miR168b | 6 | __...... | 1 | 75 |
MIMAT0004708 | rno-miR-9a-3p | 2 | ......__ | 7 | 75 |
MIMAT0000486 | cbr-miR-79 | 2 | ......__ | 7 | 75 |
MIMAT0000484 | cbr-miR-75 | 2 | ......__ | 7 | 75 |
MIMAT0000442 | hsa-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0000352 | dme-miR-79-3p | 1 | ......__ | 6 | 75 |
MIMAT0000143 | mmu-miR-9-3p | 2 | ......__ | 7 | 75 |
MIMAT0020792 | dme-miR-9a-3p | 1 | ......__ | 6 | 75 |
MIMAT0000109 | dme-miR-4-3p | 2 | ......__ | 7 | 75 |
MIMAT0020326 | cel-miR-90-5p | 7 | _......_ | 2 | 75 |
MIMAT0000051 | cel-miR-79-3p | 2 | ......__ | 7 | 75 |
MIMAT0000047 | cel-miR-75-3p | 2 | ......__ | 7 | 75 |