RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | taagagga | 8 | ||
MIMAT0003715 | ebv-miR-BART17-5p | 1 | ........ | 8 | 100 |
MIMAT0036301 | chi-miR-877-3p | 7 | _....... | 1 | 87 |
MIMAT0034736 | eca-miR-9159 | 7 | _....... | 1 | 87 |
MIMAT0028170 | dev-miR-D1-3p | 7 | _....... | 1 | 87 |
MIMAT0026047 | mdm-miR7121h | 7 | _....... | 1 | 87 |
MIMAT0026046 | mdm-miR7121g | 7 | _....... | 1 | 87 |
MIMAT0026045 | mdm-miR7121f | 7 | _....... | 1 | 87 |
MIMAT0026044 | mdm-miR7121e | 7 | _....... | 1 | 87 |
MIMAT0026043 | mdm-miR7121d | 7 | _....... | 1 | 87 |
MIMAT0026042 | mdm-miR7121c | 7 | _....... | 1 | 87 |
MIMAT0026041 | mdm-miR7121b | 7 | _....... | 1 | 87 |
MIMAT0026040 | mdm-miR7121a | 7 | _....... | 1 | 87 |
MIMAT0028078 | mmu-miR-7086-5p | 1 | _....... | 7 | 87 |
MIMAT0027823 | mmu-miR-6961-3p | 7 | _....... | 1 | 87 |
MIMAT0027663 | hsa-miR-6881-3p | 8 | _....... | 2 | 87 |
MIMAT0027329 | ppe-miR6293 | 1 | ......._ | 7 | 87 |
MIMAT0023353 | hco-miR-5902-3p | 1 | _....... | 7 | 87 |
MIMAT0018190 | hsa-miR-3916 | 1 | _....... | 7 | 87 |
MIMAT0006473 | mml-miR-627-3p | 7 | _....... | 1 | 87 |
MIMAT0007501 | gga-miR-1630 | 2 | _....... | 8 | 87 |
MIMAT0004950 | hsa-miR-877-3p | 7 | _....... | 1 | 87 |
MIMAT0035382 | nve-miR-2041b-3p | 1 | .t...... | 8 | 87 |
MIMAT0035380 | nve-miR-2041b | 1 | .t...... | 8 | 87 |
MIMAT0022201 | mtr-miR5555-5p | 1 | ......t. | 8 | 87 |
MIMAT0021675 | gma-miR4413b | 1 | ......a. | 8 | 87 |
MIMAT0021401 | rmi-miR-5328 | 1 | .t...... | 8 | 87 |
MIMAT0020911 | dme-miR-2490-3p | 8 | ......c. | 1 | 87 |
MIMAT0007528 | gga-miR-1650 | 8 | .c...... | 1 | 87 |
MIMAT0037254 | ata-miR5084-5p | 7 | __...... | 2 | 75 |
MIMAT0037005 | ssc-miR-9788-3p | 1 | __...... | 6 | 75 |
MIMAT0036300 | chi-miR-877-5p | 3 | __...... | 8 | 75 |
MIMAT0035915 | chi-miR-1185-5p | 1 | __...... | 6 | 75 |
MIMAT0035850 | bra-miR395a-5p | 8 | __...... | 3 | 75 |
MIMAT0035848 | bra-miR395c-5p | 8 | __...... | 3 | 75 |
MIMAT0035846 | bra-miR395b-5p | 8 | __...... | 3 | 75 |
MIMAT0035844 | bra-miR395d-5p | 8 | __...... | 3 | 75 |
MIMAT0035348 | gsa-miR-9394b-5p | 1 | __...... | 6 | 75 |
MIMAT0035057 | efu-miR-202 | 3 | _......_ | 8 | 75 |
MIMAT0034885 | efu-miR-9189g | 6 | _......_ | 1 | 75 |
MIMAT0034681 | eca-miR-9130 | 8 | __...... | 3 | 75 |
MIMAT0034560 | eca-miR-9019 | 3 | _......_ | 8 | 75 |
MIMAT0034434 | cfa-miR-8906 | 6 | __...... | 1 | 75 |
MIMAT0034130 | gra-miR8730 | 2 | ......__ | 7 | 75 |
MIMAT0034061 | gra-miR8688 | 1 | __...... | 6 | 75 |
MIMAT0032791 | cel-miR-8189-5p | 7 | ......__ | 2 | 75 |
MIMAT0032740 | ssa-miR-8158-5p | 1 | _......_ | 6 | 75 |
MIMAT0032482 | ssa-miR-202-5p | 2 | _......_ | 7 | 75 |
MIMAT0032284 | ssa-miR-103-5p | 8 | _......_ | 3 | 75 |
MIMAT0031852 | cpa-miR8154 | 2 | __...... | 7 | 75 |
MIMAT0030449 | bta-miR-7864 | 8 | __...... | 3 | 75 |
MIMAT0032256 | rgl-miR7810 | 1 | __...... | 6 | 75 |
MIMAT0029835 | mmu-miR-7664-3p | 7 | ......__ | 2 | 75 |
MIMAT0029802 | mmu-miR-7650-5p | 8 | __...... | 3 | 75 |
MIMAT0028625 | mdo-miR-7312-3p | 7 | __...... | 2 | 75 |
MIMAT0028546 | mdo-miR-7285-5p | 1 | __...... | 6 | 75 |
MIMAT0028246 | mml-miR-3059-5p | 8 | __...... | 3 | 75 |
MIMAT0028120 | hsa-miR-7111-3p | 7 | __...... | 2 | 75 |
MIMAT0028074 | mmu-miR-7084-5p | 2 | __...... | 7 | 75 |
MIMAT0028068 | mmu-miR-7081-5p | 1 | __...... | 6 | 75 |
MIMAT0027969 | mmu-miR-7032-3p | 7 | __...... | 2 | 75 |
MIMAT0027933 | mmu-miR-7014-3p | 6 | _......_ | 1 | 75 |
MIMAT0027827 | mmu-miR-6963-3p | 8 | _......_ | 3 | 75 |
MIMAT0027748 | mmu-miR-6924-5p | 1 | __...... | 6 | 75 |
MIMAT0027618 | hsa-miR-6859-5p | 2 | __...... | 7 | 75 |
MIMAT0027605 | hsa-miR-6852-3p | 8 | __...... | 3 | 75 |
MIMAT0027594 | hsa-miR-6847-5p | 3 | __...... | 8 | 75 |
MIMAT0027463 | hsa-miR-6781-3p | 8 | _......_ | 3 | 75 |
MIMAT0027461 | hsa-miR-6780a-3p | 7 | __...... | 2 | 75 |
MIMAT0025800 | gga-miR-6694-3p | 2 | ......__ | 7 | 75 |
MIMAT0025729 | gga-miR-6633-5p | 1 | __...... | 6 | 75 |
MIMAT0025673 | gga-miR-6583-5p | 1 | __...... | 6 | 75 |
MIMAT0025648 | gga-miR-6570-3p | 1 | __...... | 6 | 75 |
MIMAT0025570 | bta-miR-6534 | 3 | ......__ | 8 | 75 |
MIMAT0025224 | ptc-miR6462d | 7 | ......__ | 2 | 75 |
MIMAT0025206 | ptc-miR6462c-3p | 7 | ......__ | 2 | 75 |
MIMAT0025204 | ptc-miR6462b | 7 | ......__ | 2 | 75 |
MIMAT0025188 | ptc-miR6462a | 7 | ......__ | 2 | 75 |
MIMAT0024314 | mml-miR-1185-5p | 1 | __...... | 6 | 75 |
MIMAT0024297 | ggo-miR-202 | 1 | _......_ | 6 | 75 |
MIMAT0024173 | ggo-miR-1185 | 1 | __...... | 6 | 75 |
MIMAT0024155 | ggo-miR-877 | 3 | __...... | 8 | 75 |
MIMAT0023666 | ame-miR-6044 | 1 | _......_ | 6 | 75 |
MIMAT0023651 | bna-miR6031 | 1 | _......_ | 6 | 75 |
MIMAT0022399 | ath-miR5630b | 3 | ......__ | 8 | 75 |
MIMAT0022389 | ath-miR5630a | 3 | ......__ | 8 | 75 |
MIMAT0022359 | mmu-miR-5616-5p | 8 | __...... | 3 | 75 |
MIMAT0022067 | aca-miR-5445 | 2 | ......__ | 7 | 75 |
MIMAT0021849 | aca-miR-202-5p.2 | 3 | _......_ | 8 | 75 |
MIMAT0020621 | mmu-miR-5113 | 3 | __...... | 8 | 75 |
MIMAT0019888 | hsa-miR-4751 | 1 | __...... | 6 | 75 |
MIMAT0019442 | pma-miR-103b-5p | 8 | _......_ | 3 | 75 |
MIMAT0019288 | oar-miR-1185-5p | 1 | __...... | 6 | 75 |
MIMAT0018326 | gma-miR4407 | 2 | __...... | 7 | 75 |
MIMAT0018183 | hsa-miR-3909 | 8 | __...... | 3 | 75 |
MIMAT0018791 | tca-miR-3859-3p | 2 | _......_ | 7 | 75 |
MIMAT0016390 | gga-miR-3539 | 2 | __...... | 7 | 75 |
MIMAT0016365 | vvi-miR2111-3p | 7 | __...... | 2 | 75 |
MIMAT0016178 | ppy-miR-1253 | 1 | __...... | 6 | 75 |
MIMAT0016166 | ppy-miR-1236 | 6 | _......_ | 1 | 75 |
MIMAT0016148 | ppy-miR-1185 | 1 | __...... | 6 | 75 |
MIMAT0016117 | ppy-miR-877 | 3 | __...... | 8 | 75 |
MIMAT0016026 | ppy-miR-583 | 3 | _......_ | 8 | 75 |
MIMAT0017680 | aly-miR163-3p.1 | 3 | _......_ | 8 | 75 |
MIMAT0017665 | aly-miR395g-5p | 8 | __...... | 3 | 75 |
MIMAT0017613 | aly-miR831-5p | 3 | _......_ | 8 | 75 |
MIMAT0017553 | aly-miR395e-5p | 8 | __...... | 3 | 75 |
MIMAT0015625 | bmo-miR-3418 | 6 | ......__ | 1 | 75 |
MIMAT0014988 | hsa-miR-3125 | 2 | __...... | 7 | 75 |
MIMAT0014646 | tgu-miR-130b-5p | 6 | _......_ | 1 | 75 |
MIMAT0014498 | tgu-miR-2988 | 6 | _......_ | 1 | 75 |
MIMAT0014141 | ath-miR2937 | 2 | ......__ | 7 | 75 |
MIMAT0013123 | eca-miR-1185 | 1 | __...... | 6 | 75 |
MIMAT0013584 | cte-miR-2715 | 8 | __...... | 3 | 75 |
MIMAT0013518 | hsa-miR-2682-3p | 8 | _......_ | 3 | 75 |
MIMAT0013494 | mtr-miR2673b | 6 | _......_ | 1 | 75 |
MIMAT0013493 | mtr-miR2673a | 6 | _......_ | 1 | 75 |
MIMAT0012530 | dsi-miR-2584-3p | 2 | _......_ | 7 | 75 |
MIMAT0012036 | bta-miR-2454-3p | 8 | __...... | 3 | 75 |
MIMAT0009973 | bta-miR-1185 | 1 | __...... | 6 | 75 |
MIMAT0009781 | nve-miR-2030-3p | 6 | _......_ | 1 | 75 |
MIMAT0009381 | bta-miR-877 | 3 | __...... | 8 | 75 |
MIMAT0008256 | ptr-miR-583 | 3 | _......_ | 8 | 75 |
MIMAT0007968 | ptr-miR-1236 | 6 | _......_ | 1 | 75 |
MIMAT0007953 | ptr-miR-1185 | 1 | __...... | 6 | 75 |
MIMAT0007787 | osa-miR1858b | 2 | __...... | 7 | 75 |
MIMAT0007786 | osa-miR1858a | 2 | __...... | 7 | 75 |
MIMAT0006686 | cfa-miR-1841 | 1 | __...... | 6 | 75 |
MIMAT0026911 | mml-miR-877-3p | 6 | _......_ | 1 | 75 |
MIMAT0006521 | mml-miR-877-5p | 3 | __...... | 8 | 75 |
MIMAT0006445 | mml-miR-583 | 3 | _......_ | 8 | 75 |
MIMAT0007424 | gga-miR-1564-3p | 7 | __...... | 2 | 75 |
MIMAT0006952 | oan-miR-1355-3p | 8 | __...... | 3 | 75 |
MIMAT0005591 | hsa-miR-1236-3p | 6 | _......_ | 1 | 75 |
MIMAT0005533 | mcmv-miR-m01-1 | 1 | __...... | 6 | 75 |
MIMAT0005285 | rno-miR-877 | 3 | __...... | 8 | 75 |
MIMAT0004949 | hsa-miR-877-5p | 3 | __...... | 8 | 75 |
MIMAT0004862 | mmu-miR-877-3p | 8 | __...... | 3 | 75 |
MIMAT0004861 | mmu-miR-877-5p | 3 | __...... | 8 | 75 |
MIMAT0014811 | mmu-miR-3059-5p | 8 | __...... | 3 | 75 |
MIMAT0005798 | hsa-miR-1185-5p | 1 | __...... | 6 | 75 |
MIMAT0003248 | hsa-miR-583 | 3 | _......_ | 8 | 75 |
MIMAT0026530 | gga-miR-130b-5p | 6 | _......_ | 1 | 75 |
MIMAT0017142 | rno-miR-185-3p | 8 | __...... | 3 | 75 |