Result for your query miRNA sequence
>kshv-miR-k12-11
uaaugcu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1taatgct7
MIMAT0036472tch-miR-155-5p2.......8100
MIMAT0035988chi-miR-155-5p2.......8100
MIMAT0035061efu-miR-1552.......8100
MIMAT0033201ppc-miR-8328-3p1.......7100
MIMAT0032392ssa-miR-155-5p2.......8100
MIMAT0030409rno-miR-155-5p2.......8100
MIMAT0029429ipu-miR-1552.......8100
MIMAT0026231ccr-miR-1552.......8100
MIMAT0024221ggo-miR-1552.......8100
MIMAT0023788cgr-miR-1552.......8100
MIMAT0021788aca-miR-155-5p2.......8100
MIMAT0019599pma-miR-45671.......7100
MIMAT0019485pma-miR-1552.......8100
MIMAT0022959ssc-miR-155-5p2.......8100
MIMAT0016513cin-miR-4012-3p7.......1100
MIMAT0015777ppy-miR-1552.......8100
MIMAT0014612tgu-miR-155-5p2.......8100
MIMAT0013182eca-miR-1552.......8100
MIMAT0011315dre-miR-21942.......8100
MIMAT0009241bta-miR-1552.......8100
MIMAT0008048ptr-miR-1552.......8100
MIMAT0006671cfa-miR-1552.......8100
MIMAT0006216mml-miR-1552.......8100
MIMAT0006131csa-miR-1552.......8100
MIMAT0006105cin-miR-1552.......8100
MIMAT0006988oan-miR-155-5p2.......8100
MIMAT0003924mdv1-miR-M4-5p2.......8100
MIMAT0003608xtr-miR-1552.......8100
MIMAT0002181kshv-miR-K12-11-3p2.......8100
MIMAT0001851dre-miR-1552.......8100
MIMAT0001106gga-miR-1552.......8100
MIMAT0000646hsa-miR-155-5p2.......8100
MIMAT0000165mmu-miR-155-5p2.......8100
MIMAT0036915oha-miR-365a-3p1......_685
MIMAT0036548tch-miR-365a-3p1......_685
MIMAT0036498tch-miR-365b-3p1......_685
MIMAT0036177chi-miR-365-3p1......_685
MIMAT0035367nve-miR-94123_......885
MIMAT0035099efu-miR-3651......_685
MIMAT0034368cfa-miR-88711......_685
MIMAT0034141gra-miR172b8_......385
MIMAT0033458str-miR-8393-5p6_......185
MIMAT0032949ppc-miR-8244-3p1......_685
MIMAT0032739ssa-miR-734-3p3_......885
MIMAT0032623ssa-miR-365-3p1......_685
MIMAT0030851stu-miR7983-3p3......_885
MIMAT0030723prd-miR-7934-3p1......_685
MIMAT0030678prd-miR-7919-5p1......_685
MIMAT0030014mtr-miR2592br-3p2_......785
MIMAT0030012mtr-miR2592bq-3p2_......785
MIMAT0030009mtr-miR2592bp-5p2_......785
MIMAT0030008mtr-miR2592bo-3p2_......785
MIMAT0028760mdo-miR-7369-5p2_......785
MIMAT0028224hsa-miR-7157-5p8_......385
MIMAT0026318ccr-miR-7343_......885
MIMAT0026294ccr-miR-3651......_685
MIMAT0024329mml-miR-11797_......285
MIMAT0024218ggo-miR-11797_......285
MIMAT0024150ggo-miR-365a1......_685
MIMAT0023936cgr-miR-365-3p1......_685
MIMAT0023514spu-miR-59928......_385
MIMAT0022493hsa-miR-57001......_685
MIMAT0022042aca-miR-54228_......385
MIMAT0022033aca-miR-5413-3p1......_685
MIMAT0021948aca-miR-365-3p1......_685
MIMAT0020768sly-miR53043_......885
MIMAT0021349mtr-miR52887_......285
MIMAT0021331mtr-miR2600e7_......285
MIMAT0021330mtr-miR2600d7_......285
MIMAT0021329mtr-miR2600c7_......285
MIMAT0021328mtr-miR2600b7_......285
MIMAT0021171mtr-miR2592ao2_......785
MIMAT0021170mtr-miR2592an2_......785
MIMAT0019589pma-miR-45572_......785
MIMAT0018753tca-miR-3849-3p6_......185
MIMAT0016862hsa-miR-43108_......385
MIMAT0016613cin-miR-4062-3p1_......685
MIMAT0016607cin-miR-4059-3p2_......785
MIMAT0016144ppy-miR-11797_......285
MIMAT0015853ppy-miR-3651......_685
MIMAT0014582tgu-miR-365-3p1......_685
MIMAT0013904ssc-miR-365-3p1......_685
MIMAT0013038eca-miR-3651......_685
MIMAT0012887eca-miR-11797_......285
MIMAT0013355mtr-miR2592n2_......785
MIMAT0013354mtr-miR2592m2_......785
MIMAT0013353mtr-miR2592l2_......785
MIMAT0013352mtr-miR2592k2_......785
MIMAT0013351mtr-miR2592h2_......785
MIMAT0013350mtr-miR2592g2_......785
MIMAT0013349mtr-miR2592a.2-3p2_......785
MIMAT0013279mtr-miR2592s-3p2_......785
MIMAT0013278mtr-miR2592r2_......785
MIMAT0013277mtr-miR2592q-3p2_......785
MIMAT0013276mtr-miR2592p2_......785
MIMAT0013275mtr-miR2592o-3p2_......785
MIMAT0013274mtr-miR2592j2_......785
MIMAT0013273mtr-miR2592i2_......785
MIMAT0013272mtr-miR2592f2_......785
MIMAT0013271mtr-miR2592e-3p2_......785
MIMAT0013270mtr-miR2592d-3p2_......785
MIMAT0013269mtr-miR2592c2_......785
MIMAT0013268mtr-miR2592b-3p2_......785
MIMAT0011503crm-miR-7861......_685
MIMAT0013778sme-miR-124c-2-5p6......_185
MIMAT0010050osa-miR2093-5p8......_385
MIMAT0009957bta-miR-11797_......285
MIMAT0009791nve-miR-2034-3p3......_885
MIMAT0009643sko-miR-365-3p1......_685
MIMAT0017348mmu-miR-1955-3p7_......285
MIMAT0008117ptr-miR-3651......_685
MIMAT0007948ptr-miR-11797_......285
MIMAT0007773osa-miR1853-5p6_......185
MIMAT0006291mml-miR-365-3p1......_685
MIMAT0026784gga-miR-1775-5p3_......885
MIMAT0006823oan-miR-365-3p1......_685
MIMAT0005824hsa-miR-11797_......285
MIMAT0005134ppt-miR1031b3_......885
MIMAT0005133ppt-miR1031a3_......885
MIMAT0004341bta-miR-365-3p1......_685
MIMAT0004287cbr-miR-7861......_685
MIMAT0004137mdo-miR-365-3p1......_685
MIMAT0004221cel-miR-786-3p1......_685
MIMAT0012090sme-miR-1a-5p6_......185
MIMAT0003637xtr-miR-3651......_685
MIMAT0003426ebv-miR-BART14-3p3_......885
MIMAT0003361gga-miR-365-3p1......_685
MIMAT0002968tni-miR-3651......_685
MIMAT0002967fru-miR-3651......_685
MIMAT0001875dre-miR-3651......_685
MIMAT0001549rno-miR-365-3p1......_685
MIMAT0001540cfa-miR-3651......_685
MIMAT0020344cel-miR-392-5p6_......185
MIMAT0022834hsa-miR-365b-3p1......_685
MIMAT0000711mmu-miR-365-3p1......_685
MIMAT0000710hsa-miR-365a-3p1......_685