VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>rhcmv-miR-rh156-1
uauggcg

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tatggcg`	7
MIMAT0031001	hsa-miR-8074	2	`.......`	8	100
MIMAT0036934	oha-miR-458-5p	8	`_......`	3	85
MIMAT0036766	oha-miR-183-5p	1	`......_`	6	85
MIMAT0036704	oha-miR-135-5p	1	`......_`	6	85
MIMAT0036595	tch-miR-135a-5p	1	`......_`	6	85
MIMAT0036576	tch-miR-652-3p	2	`_......`	7	85
MIMAT0036573	tch-miR-183-5p	1	`......_`	6	85
MIMAT0036518	tch-miR-135b-5p	1	`......_`	6	85
MIMAT0036007	chi-miR-183	1	`......_`	6	85
MIMAT0035953	chi-miR-135b-5p	1	`......_`	6	85
MIMAT0035952	chi-miR-135a	1	`......_`	6	85
MIMAT0035729	rno-miR-15a-3p	8	`......_`	3	85
MIMAT0035222	dme-miR-9379-3p	1	`......_`	6	85
MIMAT0033463	str-miR-8394-3p	1	`......_`	6	85
MIMAT0033251	ppc-miR-8282b-3p	1	`......_`	6	85
MIMAT0033080	ppc-miR-2238l-3p	2	`_......`	7	85
MIMAT0032945	ppc-miR-312b-3p	1	`......_`	6	85
MIMAT0032647	ssa-miR-458-5p	8	`_......`	3	85
MIMAT0032429	ssa-miR-183-5p	1	`......_`	6	85
MIMAT0032348	ssa-miR-135c-5p	1	`......_`	6	85
MIMAT0032344	ssa-miR-135b-5p	1	`......_`	6	85
MIMAT0032342	ssa-miR-135a-5p	1	`......_`	6	85
MIMAT0032303	ssa-miR-122-2-3p	8	`_......`	3	85
MIMAT0032302	ssa-miR-122-3p	8	`_......`	3	85
MIMAT0031600	bbe-miR-183-5p	1	`......_`	6	85
MIMAT0031587	bbe-miR-135a-5p	1	`......_`	6	85
MIMAT0030534	prd-miR-5358a-5p	1	`_......`	6	85
MIMAT0030533	prd-miR-7884-3p	2	`_......`	7	85
MIMAT0030355	hhi-miR-183	1	`......_`	6	85
MIMAT0030160	bdi-miR7719-5p	8	`_......`	3	85
MIMAT0032210	lva-miR-183-5p	1	`......_`	6	85
MIMAT0029754	cbn-miR-7639	1	`......_`	6	85
MIMAT0029412	ipu-miR-135c	1	`......_`	6	85
MIMAT0029411	ipu-miR-135b	1	`......_`	6	85
MIMAT0029410	ipu-miR-135a	1	`......_`	6	85
MIMAT0029350	lja-miR7527	2	`_......`	7	85
MIMAT0029121	gga-miR-7483-3p	6	`......_`	1	85
MIMAT0029046	gga-miR-7446-5p	6	`_......`	1	85
MIMAT0026243	ccr-miR-183	1	`......_`	6	85
MIMAT0026216	ccr-miR-135c	1	`......_`	6	85
MIMAT0025795	gga-miR-6689-3p	3	`_......`	8	85
MIMAT0025429	pol-miR-122-3p	8	`_......`	3	85
MIMAT0025393	tgu-miR-183	1	`......_`	6	85
MIMAT0024578	bta-miR-652	2	`_......`	7	85
MIMAT0024253	ggo-miR-135b	1	`......_`	6	85
MIMAT0024153	ggo-miR-652	2	`_......`	7	85
MIMAT0023992	cgr-miR-652-3p	2	`_......`	7	85
MIMAT0022823	sha-miR-135a	1	`......_`	6	85
MIMAT0022657	ola-miR-135b	1	`......_`	6	85
MIMAT0022604	ola-miR-122	8	`_......`	3	85
MIMAT0022547	ola-miR-135a	1	`......_`	6	85
MIMAT0023112	tur-miR-263a-5p	1	`......_`	6	85
MIMAT0022299	hsa-miR-5590-5p	8	`......_`	3	85
MIMAT0021750	aca-miR-135-5p	1	`......_`	6	85
MIMAT0021724	aca-miR-122-3p	8	`_......`	3	85
MIMAT0020167	dme-miR-4952-3p	8	`_......`	3	85
MIMAT0019491	pma-miR-183-5p	1	`......_`	6	85
MIMAT0019465	pma-miR-135b	1	`......_`	6	85
MIMAT0019463	pma-miR-135a-5p	1	`......_`	6	85
MIMAT0018636	tca-miR-3807-5p	1	`_......`	6	85
MIMAT0016425	cin-miR-132-5p	1	`......_`	6	85
MIMAT0016409	cin-miR-135-5p	1	`......_`	6	85
MIMAT0016085	ppy-miR-652	2	`_......`	7	85
MIMAT0015780	ppy-miR-183	1	`......_`	6	85
MIMAT0015758	ppy-miR-135b	1	`......_`	6	85
MIMAT0015649	bhv1-miR-B10	3	`_......`	8	85
MIMAT0015438	bmo-miR-3255	8	`......_`	3	85
MIMAT0014560	tgu-miR-135b	1	`......_`	6	85
MIMAT0014559	tgu-miR-135a-5p	1	`......_`	6	85
MIMAT0026987	tgu-miR-122-3p	8	`_......`	3	85
MIMAT0026962	tgu-miR-458-5p	8	`_......`	3	85
MIMAT0013240	eca-miR-652	2	`_......`	7	85
MIMAT0013078	eca-miR-135a	1	`......_`	6	85
MIMAT0012952	eca-miR-135b	1	`......_`	6	85
MIMAT0012938	eca-miR-183	1	`......_`	6	85
MIMAT0011705	ppc-miR-312a	1	`......_`	6	85
MIMAT0011668	ppc-miR-2253b	1	`......_`	6	85
MIMAT0009992	bfl-miR-135a	1	`......_`	6	85
MIMAT0009839	cfa-miR-135b	1	`......_`	6	85
MIMAT0009813	nve-miR-2044-3p	1	`......_`	6	85
MIMAT0009684	spu-miR-183	1	`......_`	6	85
MIMAT0009487	bfl-miR-183	1	`......_`	6	85
MIMAT0009245	bta-miR-183	1	`......_`	6	85
MIMAT0009229	bta-miR-135b	1	`......_`	6	85
MIMAT0009228	bta-miR-135a	1	`......_`	6	85
MIMAT0008302	ptr-miR-652	2	`_......`	7	85
MIMAT0008032	ptr-miR-135b	1	`......_`	6	85
MIMAT0006743	cfa-miR-652	2	`_......`	7	85
MIMAT0010196	cfa-miR-135a-5p	1	`......_`	6	85
MIMAT0006621	cfa-miR-183	1	`......_`	6	85
MIMAT0006493	mml-miR-652	2	`_......`	7	85
MIMAT0006191	mml-miR-135b-5p	1	`......_`	6	85
MIMAT0026813	mml-miR-122a-3p	7	`_......`	2	85
MIMAT0007745	gga-miR-458a-5p	8	`_......`	3	85
MIMAT0007536	gga-miR-135b	1	`......_`	6	85
MIMAT0006132	csa-miR-183	1	`......_`	6	85
MIMAT0006107	cin-miR-183-5p	1	`......_`	6	85
MIMAT0007009	oan-miR-458-5p	8	`_......`	3	85
MIMAT0006870	oan-miR-135b-5p	1	`......_`	6	85
MIMAT0006805	oan-miR-183	1	`......_`	6	85
MIMAT0005740	age-miR-506	2	`_......`	7	85
MIMAT0005342	rno-miR-652-3p	2	`_......`	7	85
MIMAT0017291	rno-miR-879-3p	3	`......_`	8	85
MIMAT0004146	mdo-miR-183-5p	1	`......_`	6	85
MIMAT0004109	mdo-miR-135b-5p	1	`......_`	6	85
MIMAT0004108	mdo-miR-135a-5p	1	`......_`	6	85
MIMAT0026659	mdo-miR-122-3p	7	`_......`	2	85
MIMAT0003711	mmu-miR-652-3p	2	`_......`	7	85
MIMAT0003612	xtr-miR-183	1	`......_`	6	85
MIMAT0003598	xtr-miR-135	1	`......_`	6	85
MIMAT0003348	dre-miR-135a	1	`......_`	6	85
MIMAT0003322	hsa-miR-652-3p	2	`_......`	7	85
MIMAT0003090	tni-miR-183	1	`......_`	6	85
MIMAT0003089	fru-miR-183	1	`......_`	6	85
MIMAT0003052	tni-miR-135a	1	`......_`	6	85
MIMAT0003051	fru-miR-135a	1	`......_`	6	85
MIMAT0003032	dre-miR-135b-5p	1	`......_`	6	85
MIMAT0003031	tni-miR-135b	1	`......_`	6	85
MIMAT0003030	fru-miR-135b	1	`......_`	6	85
MIMAT0002793	ppa-miR-183	1	`......_`	6	85
MIMAT0002791	mne-miR-183	1	`......_`	6	85
MIMAT0002789	sla-miR-183	1	`......_`	6	85
MIMAT0002787	ggo-miR-183	1	`......_`	6	85
MIMAT0002785	ptr-miR-183	1	`......_`	6	85
MIMAT0002783	mml-miR-183-5p	1	`......_`	6	85
MIMAT0015757	ppy-miR-135a	1	`......_`	6	85
MIMAT0002253	ggo-miR-135a	1	`......_`	6	85
MIMAT0002252	ptr-miR-135a	1	`......_`	6	85
MIMAT0002251	mml-miR-135a-5p	1	`......_`	6	85
MIMAT0002250	ppa-miR-135	1	`......_`	6	85
MIMAT0002249	age-miR-135	1	`......_`	6	85
MIMAT0002248	lla-miR-135	1	`......_`	6	85
MIMAT0002145	ssc-miR-183	1	`......_`	6	85
MIMAT0002121	ssc-miR-135	1	`......_`	6	85
MIMAT0032005	dre-miR-458-5p	8	`_......`	3	85
MIMAT0001833	dre-miR-135c	1	`......_`	6	85
MIMAT0001273	dre-miR-183-5p	1	`......_`	6	85
MIMAT0001191	gga-miR-183	1	`......_`	6	85
MIMAT0026550	gga-miR-122-3p	8	`_......`	3	85
MIMAT0001099	gga-miR-135a-5p	1	`......_`	6	85
MIMAT0000860	rno-miR-183-5p	1	`......_`	6	85
MIMAT0000841	rno-miR-135a-5p	1	`......_`	6	85
MIMAT0017116	rno-miR-122-3p	8	`_......`	3	85
MIMAT0000758	hsa-miR-135b-5p	1	`......_`	6	85
MIMAT0000612	mmu-miR-135b-5p	1	`......_`	6	85
MIMAT0000611	rno-miR-135b-5p	1	`......_`	6	85
MIMAT0000428	hsa-miR-135a-5p	1	`......_`	6	85
MIMAT0004590	hsa-miR-122-3p	8	`_......`	3	85
MIMAT0000261	hsa-miR-183-5p	1	`......_`	6	85
MIMAT0000212	mmu-miR-183-5p	1	`......_`	6	85
MIMAT0000147	mmu-miR-135a-5p	1	`......_`	6	85