Result for your query miRNA sequence
>rcmv-miR-r111.1-1
uaugugcu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tatgtgct8
MIMAT0036931oha-miR-455-5p1......._787
MIMAT0036241chi-miR-455-5p1......._787
MIMAT0033116ppc-miR-8299-3p8......._287
MIMAT0032772ath-miR81731_.......787
MIMAT0032736ssa-miR-8157-5p8_.......287
MIMAT0032643ssa-miR-455-5p1......._787
MIMAT0030973stu-miR164-3p2_.......887
MIMAT0029513ipu-miR-455b1......._787
MIMAT0029512ipu-miR-455a1......._787
MIMAT0029098gga-miR-7472-5p1_.......787
MIMAT0026301ccr-miR-4551......._787
MIMAT0023964cgr-miR-455-5p1......._787
MIMAT0022607ola-miR-455-5p1......._787
MIMAT0023022bra-miR57232_.......887
MIMAT0022325cin-miR-5601-5p1_.......787
MIMAT0021964aca-miR-455-5p1......._787
MIMAT0015899ppy-miR-455-5p1......._787
MIMAT0014655tgu-miR-455-5p1......._787
MIMAT0022957ssc-miR-455-5p1......._787
MIMAT0012752mdo-miR-455-5p1......._787
MIMAT0011302dre-miR-455-2-5p2......._887
MIMAT0006603cfa-miR-4551......._787
MIMAT0006339mml-miR-455-5p1......._787
MIMAT0005316rno-miR-455-5p1......._787
MIMAT0003835bta-miR-455-5p1......._787
MIMAT0003641xtr-miR-4551......._787
MIMAT0003485mmu-miR-455-5p1......._787
MIMAT0003364gga-miR-455-5p1......._787
MIMAT0003150hsa-miR-455-5p1......._787
MIMAT0003162rno-miR-1-5p7......._187
MIMAT0003029tni-miR-4551......._787
MIMAT0003028fru-miR-4551......._787
MIMAT0001879dre-miR-455-5p1......._787
MIMAT0036034chi-miR-197-5p1.c......887
MIMAT0034389cfa-miR-88851.c......887
MIMAT0028983oan-miR-7417-3p1.g......887
MIMAT0028225hsa-miR-7157-3p1.c......887
MIMAT0027831mmu-miR-6965-3p1.c......887
MIMAT0027376hsa-miR-6737-3p1.c......887
MIMAT0025636gga-miR-6565-3p1.c......887
MIMAT0022686hvsa-miR-HSUR2-5p1.c......887
MIMAT0021378isc-miR-53081.c......887
MIMAT0014362cqu-miR-988-5p1.g......887
MIMAT0012037bta-miR-24551.c......887
MIMAT0005859mmu-miR-1198-5p1......t.887
MIMAT0032015cel-miR-785-5p8.c......187
MIMAT0037219ata-miR164b-3p2_......_775
MIMAT0037217ata-miR9776-3p6_......_175
MIMAT0036836oha-miR-218-5p2__......775
MIMAT0036514tch-miR-218-5p2__......775
MIMAT0036066chi-miR-2182__......775
MIMAT0035765tae-miR9657a-3p1__......675
MIMAT0035486bdi-miR9480b1......__675
MIMAT0035485bdi-miR9480a1......__675
MIMAT0035435sly-miR9469-5p7......__275
MIMAT0035090efu-miR-93361......__675
MIMAT0035068efu-miR-218b2__......775
MIMAT0035036efu-miR-218a2__......775
MIMAT0035030efu-miR-3236_......_175
MIMAT0034895efu-miR-92658__......375
MIMAT0034886efu-miR-9189c1__......675
MIMAT0034746eca-miR-91686__......175
MIMAT0034460eca-miR-89321__......675
MIMAT0034113gra-miR164a2_......_775
MIMAT0034011gra-miR86523......__875
MIMAT0033974sly-miR164a-3p2_......_775
MIMAT0033766pxy-miR-8524-3p1......__675
MIMAT0033072ppc-miR-8284-3p7......__275
MIMAT0032947ppc-miR-8243-3p6......__175
MIMAT0032524ssa-miR-218-5p2__......775
MIMAT0031667bbe-miR-31-3p3__......875
MIMAT0031637bbe-miR-2070-3p1_......_675
MIMAT0030991hsa-miR-80646__......175
MIMAT0030649prd-miR-7911b-3p2_......_775
MIMAT0030394ptc-miR78383_......_875
MIMAT0030045oar-miR-218a2__......775
MIMAT0032227lva-miR-2006-3p7__......275
MIMAT0032180pmi-miR-2006-3p7__......275
MIMAT0029473ipu-miR-218b2__......775
MIMAT0029472ipu-miR-218a2__......775
MIMAT0028940mdo-miR-7399-5p6......__175
MIMAT0028886mdo-miR-7394a-5p1......__675
MIMAT0028667mdo-miR-7330-3p3......__875
MIMAT0026272ccr-miR-218b2__......775
MIMAT0026271ccr-miR-218a2__......775
MIMAT0027957mmu-miR-7026-3p1__......675
MIMAT0027955mmu-miR-7025-3p7__......275
MIMAT0027921mmu-miR-7008-3p1__......675
MIMAT0027907mmu-miR-7002-3p2__......775
MIMAT0025371ssc-miR-2182__......775
MIMAT0025232ptc-miR64312......__775
MIMAT0024781nta-miR6164b7......__275
MIMAT0024780nta-miR6164a7......__275
MIMAT0023855cgr-miR-218a2__......775
MIMAT0023688ame-miR-6047b6__......175
MIMAT0023381hco-miR-53528_......_375
MIMAT0022609ola-miR-218b2__......775
MIMAT0022529ola-miR-218a2__......775
MIMAT0022837mmu-miR-299b-3p1......__675
MIMAT0022298hsa-miR-5589-3p7_......_275
MIMAT0022274hsa-miR-5580-3p6......__175
MIMAT0021880aca-miR-218-5p2__......775
MIMAT0021563asu-miR-5352-3p8_......_375
MIMAT0027084bdi-miR164c-3p2_......_775
MIMAT0027067bdi-miR164a-3p2_......_775
MIMAT0022987mmu-miR-5129-3p2_......_775
MIMAT0020611mmu-miR-51042__......775
MIMAT0020589ssc-miR-218b2__......775
MIMAT0021040hsa-miR-5008-3p3__......875
MIMAT0020514dme-miR-4908-3p2__......775
MIMAT0020501bfl-miR-49051......__675
MIMAT0020048sko-miR-2006-3p7__......275
MIMAT0019960hsa-miR-4789-3p8......__375
MIMAT0019600pma-miR-45687__......275
MIMAT0019531pma-miR-218b2__......775
MIMAT0019529pma-miR-218a-5p2__......775
MIMAT0019364pma-miR-1a-5p1_......_675
MIMAT0019252oar-miR-299-3p1......__675
MIMAT0019037hsa-miR-45011......__675
MIMAT0022737hsa-miR-550b-2-5p1_......_675
MIMAT0018288gma-miR43811......__675
MIMAT0018815tca-miR-3865-3p8__......375
MIMAT0018635tca-miR-3806-3p1_......_675
MIMAT0018601ame-miR-3716a1......__675
MIMAT0018549ame-miR-37738__......375
MIMAT0022961ssc-miR-218-5p2__......775
MIMAT0016843cin-let-7f-3p8_......_375
MIMAT0016835cin-miR-4214-5p1......__675
MIMAT0016555cin-miR-4033-5p8__......375
MIMAT0016541cin-miR-4025-5p2......__775
MIMAT0016524cin-miR-4017-5p1__......675
MIMAT0017890rno-miR-3590-3p7__......275
MIMAT0017834rno-miR-299b-3p1......__675
MIMAT0016074ppy-miR-6361__......675
MIMAT0015814ppy-miR-299-3p1......__675
MIMAT0017452aly-miR164b-3p2_......_775
MIMAT0015485bmo-miR-3297-5p6_......_175
MIMAT0014891mmu-miR-466p-5p1......__675
MIMAT0014522tgu-miR-218-5p2__......775
MIMAT0014383cqu-miR-305-3p8_......_375
MIMAT0014280aae-miR-988-5p2__......775
MIMAT0014250aae-miR-305-3p8_......_375
MIMAT0016951rlcv-miR-rL1-27-3p6......__175
MIMAT0015320zma-miR164h-3p2_......_775
MIMAT0013130eca-miR-2991......__675
MIMAT0012928eca-miR-2182__......775
MIMAT0012307dps-miR-25192......__775
MIMAT0011956bta-miR-24008__......375
MIMAT0011447cel-miR-2216-5p6_......_175
MIMAT0011314dre-miR-21931......__675
MIMAT0011256sme-miR-2162-5p1__......675
MIMAT0010151mcv-miR-M1-3p1__......675
MIMAT0019171bfl-miR-2070-3p1_......_675
MIMAT0009769nve-miR-2024f-3p8_......_375
MIMAT0009767nve-miR-2024e-3p8_......_375
MIMAT0009747spu-miR-20067__......275
MIMAT0019141bfl-miR-31-3p2__......775
MIMAT0009284bta-miR-3236_......_175
MIMAT0032066dvi-miR-305-3p8_......_375
MIMAT0006672cfa-miR-2182__......775
MIMAT0006479mml-miR-6361__......675
MIMAT0006256mml-miR-299-3p1......__675
MIMAT0007587gga-miR-16957__......275
MIMAT0007537gga-miR-16573......__875
MIMAT0007490gga-miR-16226......__175
MIMAT0007422gga-miR-15636_......_175
MIMAT0006815oan-miR-218-5p2__......775
MIMAT0005837mmu-miR-11871......__675
MIMAT0005278rno-miR-466b-5p1......__675
MIMAT0004133mdo-miR-218-5p2__......775
MIMAT0003798bta-miR-2182__......775
MIMAT0003631xtr-miR-2182__......775
MIMAT0003445rlcv-miR-rL1-14-3p8_......_375
MIMAT0003306hsa-miR-6361__......675
MIMAT0026618hsa-miR-585-5p8__......375
MIMAT0002994tni-miR-218a2__......775
MIMAT0002993fru-miR-218a2__......775
MIMAT0002986tni-miR-218b2__......775
MIMAT0002985fru-miR-218b2__......775
MIMAT0022926osa-miR528-3p3__......875
MIMAT0002574mml-miR-218-5p2__......775
MIMAT0002573mne-miR-2182__......775
MIMAT0002572lla-miR-2182__......775
MIMAT0002571sla-miR-2182__......775
MIMAT0002570ptr-miR-2182__......775
MIMAT0002569ppy-miR-2182__......775
MIMAT0002568lca-miR-2182__......775
MIMAT0002567ppa-miR-2182__......775
MIMAT0002566age-miR-2182__......775
MIMAT0002565ggo-miR-2182__......775
MIMAT0002139ssc-miR-3236_......_175
MIMAT0004759mmu-miR-466a-5p1......__675
MIMAT0001869dre-miR-218b2__......775
MIMAT0001868dre-miR-218a2__......775
MIMAT0015139zma-miR164c-3p2_......_775
MIMAT0015138zma-miR164b-3p1_......_675
MIMAT0001144gga-miR-218-5p2__......775
MIMAT0017167rno-miR-299a-3p1......__675
MIMAT0000888rno-miR-218a-5p2__......775
MIMAT0000687hsa-miR-299-3p1......__675
MIMAT0000663mmu-miR-218-5p2__......775
MIMAT0020827dme-miR-305-3p8_......_375
MIMAT0004577mmu-miR-299a-3p1......__675
MIMAT0000275hsa-miR-218-5p2__......775
MIMAT0031878ath-miR164b-3p2_......_775