VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hpv16-miR-h6
ucaacaa

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcaacaa`	7
MIMAT0036903	oha-miR-338-5p	1	`.......`	7	100
MIMAT0036278	chi-miR-545-3p	1	`.......`	7	100
MIMAT0035691	bra-miR9566-5p	7	`.......`	1	100
MIMAT0033012	ppc-miR-8264-5p	8	`.......`	2	100
MIMAT0031272	stu-miR827-5p	8	`.......`	2	100
MIMAT0028228	hsa-miR-7159-5p	2	`.......`	8	100
MIMAT0020594	ssc-miR-545-3p	2	`.......`	8	100
MIMAT0017933	aly-miR4244	7	`.......`	1	100
MIMAT0017839	rno-miR-3065-5p	1	`.......`	7	100
MIMAT0017607	aly-miR827-5p	8	`.......`	2	100
MIMAT0015066	hsa-miR-3065-5p	1	`.......`	7	100
MIMAT0014836	mmu-miR-3065-5p	1	`.......`	7	100
MIMAT0013239	eca-miR-545	1	`.......`	7	100
MIMAT0003807	bta-miR-545-3p	2	`.......`	8	100
MIMAT0036948	oha-miR-7-3-3p	2	`_......`	7	85
MIMAT0036947	oha-miR-7-2-3p	1	`_......`	6	85
MIMAT0036946	oha-miR-7-1-3p	1	`_......`	6	85
MIMAT0036499	tch-miR-505-3p	3	`......_`	8	85
MIMAT0036269	chi-miR-505-3p	1	`......_`	6	85
MIMAT0035145	efu-miR-9355	8	`......_`	3	85
MIMAT0035098	efu-miR-338	2	`_......`	7	85
MIMAT0035003	efu-miR-9318a	6	`......_`	1	85
MIMAT0034981	efu-miR-9308	6	`......_`	1	85
MIMAT0034787	efu-miR-9201b	6	`......_`	1	85
MIMAT0034546	eca-miR-9006	8	`_......`	3	85
MIMAT0034527	eca-miR-8990	6	`......_`	1	85
MIMAT0034191	gra-miR8761	6	`......_`	1	85
MIMAT0033606	sma-miR-8448-5p	2	`_......`	7	85
MIMAT0033599	sma-miR-7-3p	1	`_......`	6	85
MIMAT0033215	ppc-miR-8335-3p	7	`_......`	2	85
MIMAT0032974	ppc-miR-8253-5p	6	`......_`	1	85
MIMAT0032700	ssa-miR-7a-7-3p	1	`_......`	6	85
MIMAT0032699	ssa-miR-7a-6-3p	1	`_......`	6	85
MIMAT0032698	ssa-miR-7a-5-3p	1	`_......`	6	85
MIMAT0032697	ssa-miR-7a-4-3p	1	`_......`	6	85
MIMAT0032696	ssa-miR-7a-3-3p	1	`_......`	6	85
MIMAT0032695	ssa-miR-7a-2-3p	1	`_......`	6	85
MIMAT0032694	ssa-miR-7a-1-3p	1	`_......`	6	85
MIMAT0031623	bbe-miR-2062-5p	3	`_......`	8	85
MIMAT0030231	bdi-miR7745-3p	6	`_......`	1	85
MIMAT0029660	cbn-miR-7621a	1	`......_`	6	85
MIMAT0029620	crm-miR-7603	6	`......_`	1	85
MIMAT0031143	aja-miR-7	1	`_......`	6	85
MIMAT0029131	ghr-miR7489	7	`_......`	2	85
MIMAT0028361	mml-miR-7198-3p	1	`......_`	6	85
MIMAT0028172	dev-miR-D3-3p	7	`_......`	2	85
MIMAT0028160	ssc-miR-7142-3p	7	`_......`	2	85
MIMAT0026448	sbi-miR6233-5p	6	`......_`	1	85
MIMAT0025612	gga-miR-6552-3p	1	`_......`	6	85
MIMAT0023301	osa-miR5827	7	`_......`	2	85
MIMAT0022793	sha-miR-7	1	`_......`	6	85
MIMAT0022348	cin-miR-5610-3p	8	`......_`	3	85
MIMAT0022084	aca-miR-5457	1	`......_`	6	85
MIMAT0022076	aca-miR-5452-3p	1	`_......`	6	85
MIMAT0021985	aca-miR-7-2-3p	1	`_......`	6	85
MIMAT0021984	aca-miR-7-1-3p	1	`_......`	6	85
MIMAT0021866	aca-miR-21-3p	1	`_......`	6	85
MIMAT0021219	mtr-miR5234	8	`_......`	3	85
MIMAT0021208	mtr-miR2670e	3	`......_`	8	85
MIMAT0027075	bdi-miR827-5p	8	`_......`	3	85
MIMAT0022741	hsa-miR-3529-3p	3	`_......`	8	85
MIMAT0019371	pma-miR-7a-3p	1	`_......`	6	85
MIMAT0018329	gma-miR4410	8	`......_`	3	85
MIMAT0018229	gma-miR4341	8	`......_`	3	85
MIMAT0018732	tca-miR-3843-5p	8	`_......`	3	85
MIMAT0018723	tca-miR-3839-3p	8	`_......`	3	85
MIMAT0018050	vvi-miR3638-3p	2	`_......`	7	85
MIMAT0018034	vvi-miR3631d	8	`......_`	3	85
MIMAT0018033	vvi-miR3631c	8	`......_`	3	85
MIMAT0018031	vvi-miR3631b-5p	8	`......_`	3	85
MIMAT0018029	vvi-miR3631a-5p	8	`......_`	3	85
MIMAT0016758	cin-miR-4154-3p	7	`_......`	2	85
MIMAT0016636	cin-miR-4074-5p	6	`......_`	1	85
MIMAT0016191	ppy-miR-1267	8	`......_`	3	85
MIMAT0015928	ppy-miR-505	3	`......_`	8	85
MIMAT0017704	aly-miR3436-3p	1	`_......`	6	85
MIMAT0031020	tgu-miR-7-4-3p	1	`_......`	6	85
MIMAT0014632	tgu-miR-7-1-3p	1	`_......`	6	85
MIMAT0015365	zma-miR827-5p	7	`_......`	2	85
MIMAT0013961	ssc-miR-505	1	`......_`	6	85
MIMAT0013229	eca-miR-505	3	`......_`	8	85
MIMAT0012434	dsi-miR-987-3p	3	`......_`	8	85
MIMAT0012236	dps-miR-987-3p	3	`......_`	8	85
MIMAT0020912	dme-miR-2491-3p	1	`_......`	6	85
MIMAT0012006	bta-miR-2434	6	`_......`	1	85
MIMAT0009988	bfl-miR-2062-5p	3	`_......`	8	85
MIMAT0009772	nve-miR-2027-5p	8	`_......`	3	85
MIMAT0009341	bta-miR-505	3	`......_`	8	85
MIMAT0009102	dya-miR-287	8	`......_`	3	85
MIMAT0009003	dwi-miR-287	8	`......_`	3	85
MIMAT0008930	dvi-miR-287	8	`......_`	3	85
MIMAT0008899	dsi-miR-287	8	`......_`	3	85
MIMAT0008770	dse-miR-287	8	`......_`	3	85
MIMAT0008757	dpe-miR-287	8	`......_`	3	85
MIMAT0008659	dmo-miR-287	8	`......_`	3	85
MIMAT0008563	dgr-miR-287	8	`......_`	3	85
MIMAT0008483	der-miR-287	8	`......_`	3	85
MIMAT0008424	dan-miR-287	8	`......_`	3	85
MIMAT0008178	ptr-miR-505	3	`......_`	8	85
MIMAT0007991	ptr-miR-1267	8	`......_`	3	85
MIMAT0007826	osa-miR1873	1	`......_`	6	85
MIMAT0006369	mml-miR-505-3p	3	`......_`	8	85
MIMAT0026839	mml-miR-196a-3p	3	`_......`	8	85
MIMAT0007726	gga-miR-1808	7	`_......`	2	85
MIMAT0007368	gma-miR1510a-3p	6	`_......`	1	85
MIMAT0015251	cin-miR-7-3p	1	`_......`	6	85
MIMAT0009195	oan-miR-7-1-3p	1	`_......`	6	85
MIMAT0007198	oan-miR-1396	8	`......_`	3	85
MIMAT0006987	oan-miR-7-3p	1	`_......`	6	85
MIMAT0005921	hsa-miR-1267	8	`......_`	3	85
MIMAT0005369	tae-miR1134	1	`_......`	6	85
MIMAT0017299	rno-miR-196c-3p	2	`_......`	7	85
MIMAT0026643	gga-miR-21-3p	1	`_......`	6	85
MIMAT0003513	mmu-miR-505-3p	3	`......_`	8	85
MIMAT0002876	hsa-miR-505-3p	3	`......_`	8	85
MIMAT0001251	dps-miR-287	8	`......_`	3	85
MIMAT0017091	rno-miR-7a-2-3p	1	`_......`	6	85
MIMAT0017071	mmu-miR-7b-3p	1	`_......`	6	85
MIMAT0017070	mmu-miR-7a-2-3p	1	`_......`	6	85
MIMAT0004670	mmu-miR-7a-1-3p	1	`_......`	6	85
MIMAT0000607	rno-miR-7a-1-3p	2	`_......`	7	85
MIMAT0000360	dme-miR-287-3p	8	`......_`	3	85
MIMAT0004554	hsa-miR-7-2-3p	1	`_......`	6	85
MIMAT0004553	hsa-miR-7-1-3p	1	`_......`	6	85