RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | tcaccaga | 8 | ||
MIMAT0001575 | hcmv-miR-UL22A-3p | 1 | ........ | 8 | 100 |
MIMAT0031694 | bbe-miR-4868c-3p | 7 | ......._ | 1 | 87 |
MIMAT0031624 | bbe-miR-2062-3p | 8 | ......._ | 2 | 87 |
MIMAT0031181 | hsa-miR-7978 | 7 | _....... | 1 | 87 |
MIMAT0028006 | mmu-miR-7051-5p | 1 | ......._ | 7 | 87 |
MIMAT0025743 | gga-miR-6646-3p | 7 | _....... | 1 | 87 |
MIMAT0021212 | mtr-miR5228 | 7 | _....... | 1 | 87 |
MIMAT0020651 | rgl-miR5140 | 8 | ......._ | 2 | 87 |
MIMAT0020106 | bfl-miR-4868c-5p | 7 | ......._ | 1 | 87 |
MIMAT0018568 | ame-miR-3789 | 8 | _....... | 2 | 87 |
MIMAT0016851 | hsa-miR-4299 | 8 | ......._ | 2 | 87 |
MIMAT0016162 | ppy-miR-1226 | 1 | ......._ | 7 | 87 |
MIMAT0019169 | bfl-miR-2062-3p | 8 | ......._ | 2 | 87 |
MIMAT0007535 | gga-miR-1656 | 1 | ......._ | 7 | 87 |
MIMAT0005579 | mml-miR-1226 | 1 | ......._ | 7 | 87 |
MIMAT0005578 | ptr-miR-1226 | 1 | ......._ | 7 | 87 |
MIMAT0005577 | hsa-miR-1226-3p | 1 | ......._ | 7 | 87 |
MIMAT0004321 | ath-miR869.2 | 7 | _....... | 1 | 87 |
MIMAT0035355 | gsa-miR-9403-3p | 8 | ......c. | 1 | 87 |
MIMAT0035181 | efu-miR-9364 | 1 | ......c. | 8 | 87 |
MIMAT0024559 | cca-miR6108f | 8 | ......t. | 1 | 87 |
MIMAT0020710 | bdi-miR166g-3p | 8 | ......c. | 1 | 87 |
MIMAT0019593 | pma-miR-4561 | 8 | ......a. | 1 | 87 |
MIMAT0019025 | hsa-miR-4490 | 8 | .t...... | 1 | 87 |
MIMAT0005274 | smo-miR1115-3p | 1 | ......a. | 8 | 87 |
MIMAT0036710 | oha-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0036035 | chi-miR-197-3p | 2 | ......__ | 7 | 75 |
MIMAT0035063 | efu-miR-138a | 8 | _......_ | 3 | 75 |
MIMAT0035050 | efu-miR-9323 | 1 | ......__ | 6 | 75 |
MIMAT0035034 | efu-miR-138b | 8 | _......_ | 3 | 75 |
MIMAT0034952 | efu-miR-9292 | 3 | _......_ | 8 | 75 |
MIMAT0034788 | efu-miR-9202 | 6 | ......__ | 1 | 75 |
MIMAT0034704 | eca-miR-1911 | 1 | _......_ | 6 | 75 |
MIMAT0034679 | eca-miR-9128 | 6 | _......_ | 1 | 75 |
MIMAT0034526 | eca-miR-8989 | 6 | _......_ | 1 | 75 |
MIMAT0034037 | gra-miR8666 | 7 | ......__ | 2 | 75 |
MIMAT0032352 | ssa-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0031620 | bbe-miR-2060b-3p | 2 | _......_ | 7 | 75 |
MIMAT0030430 | hsa-miR-7855-5p | 7 | ......__ | 2 | 75 |
MIMAT0029868 | mmu-miR-7677-5p | 8 | ......__ | 3 | 75 |
MIMAT0029414 | ipu-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0029373 | lja-miR7546 | 7 | ......__ | 2 | 75 |
MIMAT0029145 | ghr-miR7498 | 7 | ......__ | 2 | 75 |
MIMAT0029004 | oan-miR-7427-5p | 6 | ......__ | 1 | 75 |
MIMAT0028759 | mdo-miR-7368-3p | 1 | _......_ | 6 | 75 |
MIMAT0028559 | mdo-miR-7288-3p | 1 | ......__ | 6 | 75 |
MIMAT0028474 | mdo-miR-7254-5p | 1 | ......__ | 6 | 75 |
MIMAT0028215 | hsa-miR-7152-3p | 6 | __...... | 1 | 75 |
MIMAT0028147 | ssc-miR-7136-5p | 6 | __...... | 1 | 75 |
MIMAT0026218 | ccr-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0028040 | mmu-miR-6769b-5p | 7 | _......_ | 2 | 75 |
MIMAT0027753 | mmu-miR-6926-3p | 1 | ......__ | 6 | 75 |
MIMAT0027701 | mmu-miR-6900-3p | 6 | ......__ | 1 | 75 |
MIMAT0027549 | hsa-miR-6824-3p | 8 | __...... | 3 | 75 |
MIMAT0027429 | hsa-miR-6764-3p | 8 | __...... | 3 | 75 |
MIMAT0027406 | hsa-miR-6753-5p | 1 | _......_ | 6 | 75 |
MIMAT0025848 | hsa-miR-6511b-3p | 3 | ......__ | 8 | 75 |
MIMAT0025812 | gga-miR-6702-5p | 1 | _......_ | 6 | 75 |
MIMAT0025791 | gga-miR-6685-3p | 6 | ......__ | 1 | 75 |
MIMAT0025479 | hsa-miR-6511a-3p | 3 | ......__ | 8 | 75 |
MIMAT0025363 | ssc-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0025342 | pde-miR950 | 6 | __...... | 1 | 75 |
MIMAT0025194 | ptc-miR6466-5p | 6 | __...... | 1 | 75 |
MIMAT0027295 | ppe-miR6270 | 7 | __...... | 2 | 75 |
MIMAT0024382 | ppy-miR-4774 | 6 | __...... | 1 | 75 |
MIMAT0024180 | ggo-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0024098 | ggo-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0023764 | cgr-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0023665 | ame-miR-6043 | 7 | ......__ | 2 | 75 |
MIMAT0022771 | sha-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0022554 | ola-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0022467 | gma-miR5679 | 7 | ......__ | 2 | 75 |
MIMAT0022371 | mmu-miR-5622-5p | 2 | ......__ | 7 | 75 |
MIMAT0022311 | cel-miR-356b-5p | 6 | ......__ | 1 | 75 |
MIMAT0021757 | aca-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0027079 | bdi-miR166g-5p | 6 | __...... | 1 | 75 |
MIMAT0021104 | osa-miR5154 | 3 | _......_ | 8 | 75 |
MIMAT0019929 | hsa-miR-4774-5p | 6 | __...... | 1 | 75 |
MIMAT0019858 | hsa-miR-4733-3p | 2 | _......_ | 7 | 75 |
MIMAT0019470 | pma-miR-138b | 8 | _......_ | 3 | 75 |
MIMAT0019469 | pma-miR-138a | 8 | _......_ | 3 | 75 |
MIMAT0018978 | hsa-miR-4456 | 7 | _......_ | 2 | 75 |
MIMAT0018701 | tca-miR-3834-3p | 8 | __...... | 3 | 75 |
MIMAT0016739 | cin-miR-4140-3p | 1 | __...... | 6 | 75 |
MIMAT0016703 | cin-miR-4113-5p | 6 | __...... | 1 | 75 |
MIMAT0016570 | cin-miR-4040-3p | 3 | __...... | 8 | 75 |
MIMAT0016394 | cin-miR-3575-5p | 2 | ......__ | 7 | 75 |
MIMAT0016348 | ahy-miR3521 | 6 | ......__ | 1 | 75 |
MIMAT0015760 | ppy-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0015543 | bmo-miR-3357 | 6 | __...... | 1 | 75 |
MIMAT0014796 | api-miR-3045b | 8 | _......_ | 3 | 75 |
MIMAT0014794 | api-miR-3015c | 2 | __...... | 7 | 75 |
MIMAT0014515 | tgu-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0014456 | tgu-miR-2958 | 8 | _......_ | 3 | 75 |
MIMAT0019187 | rlcv-miR-rL1-19-3p | 3 | ......__ | 8 | 75 |
MIMAT0012959 | eca-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0012957 | eca-miR-1905b | 1 | _......_ | 6 | 75 |
MIMAT0012925 | eca-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0012716 | hvt-miR-H5-5p | 7 | _......_ | 2 | 75 |
MIMAT0013672 | bmo-miR-2781 | 2 | __...... | 7 | 75 |
MIMAT0013614 | bmo-miR-2754 | 6 | __...... | 1 | 75 |
MIMAT0011700 | ppc-miR-2265 | 2 | __...... | 7 | 75 |
MIMAT0011163 | hsa-miR-548q | 7 | _......_ | 2 | 75 |
MIMAT0009398 | mmu-miR-1934-5p | 6 | __...... | 1 | 75 |
MIMAT0009257 | bta-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0008034 | ptr-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0007886 | hsa-miR-1911-3p | 1 | _......_ | 6 | 75 |
MIMAT0007866 | mmu-miR-1905 | 1 | _......_ | 6 | 75 |
MIMAT0007775 | osa-miR1854-5p | 6 | ......__ | 1 | 75 |
MIMAT0006698 | cfa-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0006654 | cfa-miR-138a | 8 | _......_ | 3 | 75 |
MIMAT0006646 | cfa-miR-138b | 8 | _......_ | 3 | 75 |
MIMAT0006644 | cfa-miR-1838 | 2 | _......_ | 7 | 75 |
MIMAT0006230 | mml-miR-197-3p | 2 | ......__ | 7 | 75 |
MIMAT0006194 | mml-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0007665 | gga-miR-1758 | 1 | ......__ | 6 | 75 |
MIMAT0007446 | gga-miR-1354 | 8 | ......__ | 3 | 75 |
MIMAT0015263 | cin-miR-200-5p | 1 | ......__ | 6 | 75 |
MIMAT0005964 | osa-miR1430 | 6 | ......__ | 1 | 75 |
MIMAT0007216 | oan-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0005861 | mml-miR-1240 | 1 | ......__ | 6 | 75 |
MIMAT0005547 | mcmv-miR-M55-1 | 6 | ......__ | 1 | 75 |
MIMAT0005160 | ppt-miR1046-3p | 6 | ......__ | 1 | 75 |
MIMAT0005110 | ppt-miR1024b | 6 | __...... | 1 | 75 |
MIMAT0005109 | ppt-miR1024a | 6 | __...... | 1 | 75 |
MIMAT0020873 | dme-miR-976-5p | 8 | ......__ | 3 | 75 |
MIMAT0004111 | mdo-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0003813 | bta-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0003599 | xtr-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0014961 | mmu-miR-344d-2-5p | 8 | __...... | 3 | 75 |
MIMAT0003441 | rlcv-miR-rL1-12-5p | 3 | __...... | 8 | 75 |
MIMAT0003080 | tni-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0003079 | fru-miR-138 | 8 | _......_ | 3 | 75 |
MIMAT0002604 | ppa-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0002603 | age-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0002602 | mne-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0002601 | ppy-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0002600 | ptr-miR-197 | 2 | ......__ | 7 | 75 |
MIMAT0001835 | dre-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0001122 | gga-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0020917 | osa-miR169i-5p.2 | 6 | ......__ | 1 | 75 |
MIMAT0000844 | rno-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0000430 | hsa-miR-138-5p | 8 | _......_ | 3 | 75 |
MIMAT0000227 | hsa-miR-197-3p | 2 | ......__ | 7 | 75 |
MIMAT0000150 | mmu-miR-138-5p | 8 | _......_ | 3 | 75 |