RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | tcaccgtt | 8 | ||
MIMAT0033053 | ppc-miR-8277-5p | 8 | ........ | 1 | 100 |
MIMAT0016340 | ahy-miR3514-3p | 1 | ........ | 8 | 100 |
MIMAT0016944 | rlcv-miR-rL1-22-3p | 1 | ........ | 8 | 100 |
MIMAT0019241 | oar-miR-433-5p | 8 | ......._ | 2 | 87 |
MIMAT0013544 | cte-miR-2691-5p | 8 | ......._ | 2 | 87 |
MIMAT0026875 | mml-miR-433-5p | 8 | ......._ | 2 | 87 |
MIMAT0003442 | rlcv-miR-rL1-12-3p | 7 | _....... | 1 | 87 |
MIMAT0017192 | rno-miR-433-5p | 8 | ......._ | 2 | 87 |
MIMAT0026554 | hsa-miR-433-5p | 8 | ......._ | 2 | 87 |
MIMAT0001419 | mmu-miR-433-5p | 8 | ......._ | 2 | 87 |
MIMAT0033895 | atr-miR8606 | 1 | ......a. | 8 | 87 |
MIMAT0031048 | mdo-miR-181b-3-3p | 1 | ......a. | 8 | 87 |
MIMAT0011790 | dme-miR-2282-3p | 8 | ......a. | 1 | 87 |
MIMAT0036929 | oha-miR-451-?? | 3 | __...... | 8 | 75 |
MIMAT0036237 | chi-miR-451-5p | 3 | __...... | 8 | 75 |
MIMAT0035795 | tae-miR397-5p | 1 | ......__ | 6 | 75 |
MIMAT0035394 | nve-miR-9433 | 8 | ......__ | 3 | 75 |
MIMAT0035327 | gsa-miR-9391-3p | 1 | __...... | 6 | 75 |
MIMAT0035259 | gsa-miR-36-3p | 1 | ......__ | 6 | 75 |
MIMAT0035029 | efu-miR-411 | 6 | _......_ | 1 | 75 |
MIMAT0034747 | eca-miR-9169 | 8 | _......_ | 3 | 75 |
MIMAT0034614 | eca-miR-9069 | 7 | _......_ | 2 | 75 |
MIMAT0034193 | gra-miR7502e | 8 | __...... | 3 | 75 |
MIMAT0033645 | sma-miR-8463-5p | 8 | ......__ | 3 | 75 |
MIMAT0033627 | sma-miR-8457-3p | 1 | ......__ | 6 | 75 |
MIMAT0033467 | str-miR-37b-3p | 1 | ......__ | 6 | 75 |
MIMAT0033459 | str-miR-8393-3p | 1 | ......__ | 6 | 75 |
MIMAT0033455 | str-miR-37a-3p | 1 | ......__ | 6 | 75 |
MIMAT0033453 | str-miR-8392-3p | 2 | ......__ | 7 | 75 |
MIMAT0033437 | str-miR-40-3p | 1 | ......__ | 6 | 75 |
MIMAT0033435 | str-miR-8387-3p | 1 | ......__ | 6 | 75 |
MIMAT0033433 | str-miR-8386-3p | 2 | ......__ | 7 | 75 |
MIMAT0033376 | str-miR-1175-5p | 6 | ......__ | 1 | 75 |
MIMAT0033233 | ppc-miR-2235a-9-3p | 1 | ......__ | 6 | 75 |
MIMAT0033211 | ppc-miR-8333-3p | 8 | __...... | 3 | 75 |
MIMAT0033070 | ppc-miR-8283-3p | 1 | ......__ | 6 | 75 |
MIMAT0033034 | ppc-miR-2235a-11-3p | 1 | ......__ | 6 | 75 |
MIMAT0033005 | ppc-miR-2235a-10-3p | 1 | ......__ | 6 | 75 |
MIMAT0032983 | ppc-miR-8257-3p | 3 | ......__ | 8 | 75 |
MIMAT0032953 | ppc-miR-2235d-3p | 1 | ......__ | 6 | 75 |
MIMAT0032951 | ppc-miR-2235c-3p | 1 | ......__ | 6 | 75 |
MIMAT0032946 | ppc-miR-8243-5p | 1 | ......__ | 6 | 75 |
MIMAT0032913 | ppc-miR-8232-3p | 1 | ......__ | 6 | 75 |
MIMAT0032889 | ppc-miR-42c-3p | 1 | ......__ | 6 | 75 |
MIMAT0032883 | ppc-miR-36-3p | 1 | ......__ | 6 | 75 |
MIMAT0032851 | ppc-miR-2235b-3p | 1 | ......__ | 6 | 75 |
MIMAT0031749 | bma-miR-36a | 1 | ......__ | 6 | 75 |
MIMAT0031647 | bbe-miR-216-3p | 7 | _......_ | 2 | 75 |
MIMAT0030813 | prd-miR-39-3p | 1 | ......__ | 6 | 75 |
MIMAT0030766 | prd-miR-7948d-5p | 6 | ......__ | 1 | 75 |
MIMAT0030715 | prd-miR-35a-3p | 1 | ......__ | 6 | 75 |
MIMAT0030681 | prd-miR-40-3p | 1 | ......__ | 6 | 75 |
MIMAT0030567 | prd-miR-37-3p | 1 | ......__ | 6 | 75 |
MIMAT0030557 | prd-miR-7940b-3p | 1 | ......__ | 6 | 75 |
MIMAT0030511 | prd-miR-35b-3p | 1 | ......__ | 6 | 75 |
MIMAT0029941 | cbn-miR-35n | 1 | ......__ | 6 | 75 |
MIMAT0029940 | cbn-miR-35m | 1 | ......__ | 6 | 75 |
MIMAT0029939 | cbn-miR-35l | 1 | ......__ | 6 | 75 |
MIMAT0029938 | cbn-miR-35k | 1 | ......__ | 6 | 75 |
MIMAT0029937 | cbn-miR-35j | 1 | ......__ | 6 | 75 |
MIMAT0029936 | cbn-miR-35i | 1 | ......__ | 6 | 75 |
MIMAT0029935 | cbn-miR-35h | 1 | ......__ | 6 | 75 |
MIMAT0029934 | cbn-miR-35g | 1 | ......__ | 6 | 75 |
MIMAT0029933 | cbn-miR-35f | 1 | ......__ | 6 | 75 |
MIMAT0029932 | cbn-miR-35e | 1 | ......__ | 6 | 75 |
MIMAT0029931 | cbn-miR-35d | 1 | ......__ | 6 | 75 |
MIMAT0029930 | cbn-miR-35c | 1 | ......__ | 6 | 75 |
MIMAT0029929 | cbn-miR-35b | 1 | ......__ | 6 | 75 |
MIMAT0029928 | cbn-miR-35a | 1 | ......__ | 6 | 75 |
MIMAT0029926 | cbn-miR-38 | 1 | ......__ | 6 | 75 |
MIMAT0029925 | cbn-miR-39 | 1 | ......__ | 6 | 75 |
MIMAT0029924 | crm-miR-35i | 1 | ......__ | 6 | 75 |
MIMAT0029921 | crm-miR-36 | 1 | ......__ | 6 | 75 |
MIMAT0029920 | crm-miR-35h | 1 | ......__ | 6 | 75 |
MIMAT0029919 | cbr-miR-35g | 1 | ......__ | 6 | 75 |
MIMAT0029918 | cbr-miR-35f | 1 | ......__ | 6 | 75 |
MIMAT0027848 | mmu-miR-6973a-5p | 7 | _......_ | 2 | 75 |
MIMAT0024361 | ppy-miR-548e | 8 | __...... | 3 | 75 |
MIMAT0024334 | mml-miR-1250 | 6 | _......_ | 1 | 75 |
MIMAT0024235 | ggo-miR-1250 | 6 | _......_ | 1 | 75 |
MIMAT0023444 | hco-miR-40a | 1 | ......__ | 6 | 75 |
MIMAT0023430 | hco-miR-40d | 1 | ......__ | 6 | 75 |
MIMAT0023429 | hco-miR-40c | 1 | ......__ | 6 | 75 |
MIMAT0023323 | hco-miR-40b | 1 | ......__ | 6 | 75 |
MIMAT0023050 | tur-miR-5730-5p | 1 | ......__ | 6 | 75 |
MIMAT0021960 | aca-miR-451-5p | 3 | __...... | 8 | 75 |
MIMAT0021549 | asu-miR-5348-3p | 1 | ......__ | 6 | 75 |
MIMAT0021547 | asu-miR-36f-3p | 1 | ......__ | 6 | 75 |
MIMAT0021545 | asu-miR-5347-3p | 8 | _......_ | 3 | 75 |
MIMAT0021448 | asu-miR-36e-3p | 1 | ......__ | 6 | 75 |
MIMAT0021446 | asu-miR-36d-3p | 1 | ......__ | 6 | 75 |
MIMAT0021444 | asu-miR-36c-3p | 1 | ......__ | 6 | 75 |
MIMAT0021442 | asu-miR-36b-3p | 1 | ......__ | 6 | 75 |
MIMAT0021440 | asu-miR-36a-3p | 1 | ......__ | 6 | 75 |
MIMAT0021388 | rmi-miR-5316b | 1 | ......__ | 6 | 75 |
MIMAT0021387 | rmi-miR-5316a | 1 | ......__ | 6 | 75 |
MIMAT0019964 | hsa-miR-4792 | 6 | ......__ | 1 | 75 |
MIMAT0019682 | osa-miR812o-3p | 7 | __...... | 2 | 75 |
MIMAT0019631 | pma-miR-4598 | 6 | __...... | 1 | 75 |
MIMAT0019553 | pma-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0018382 | ssc-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0018883 | tca-miR-3791-3p | 1 | ......__ | 6 | 75 |
MIMAT0018827 | tca-miR-3867-3p | 3 | _......_ | 8 | 75 |
MIMAT0018570 | ame-miR-3791 | 1 | ......__ | 6 | 75 |
MIMAT0018538 | ame-miR-3720 | 8 | _......_ | 3 | 75 |
MIMAT0016175 | ppy-miR-1250 | 6 | _......_ | 1 | 75 |
MIMAT0015896 | ppy-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0015489 | bmo-miR-3301 | 8 | ......__ | 3 | 75 |
MIMAT0014533 | tgu-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0014103 | bma-miR-36b | 1 | ......__ | 6 | 75 |
MIMAT0014102 | bma-miR-36c | 1 | ......__ | 6 | 75 |
MIMAT0013041 | eca-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0013646 | bmo-miR-2768-5p | 6 | ......__ | 1 | 75 |
MIMAT0013530 | cte-miR-36 | 1 | ......__ | 6 | 75 |
MIMAT0012442 | dsi-miR-968-3p | 1 | __...... | 6 | 75 |
MIMAT0011720 | ppc-miR-2251a | 1 | ......__ | 6 | 75 |
MIMAT0011714 | ppc-miR-38 | 1 | ......__ | 6 | 75 |
MIMAT0011690 | ppc-miR-2240a | 1 | ......__ | 6 | 75 |
MIMAT0011681 | ppc-miR-2235a-3p | 1 | ......__ | 6 | 75 |
MIMAT0011654 | ppc-miR-42b | 1 | ......__ | 6 | 75 |
MIMAT0011647 | ppc-miR-37 | 1 | ......__ | 6 | 75 |
MIMAT0011641 | ppc-miR-42a | 1 | ......__ | 6 | 75 |
MIMAT0011605 | crm-miR-35g | 1 | ......__ | 6 | 75 |
MIMAT0011603 | crm-miR-38 | 1 | ......__ | 6 | 75 |
MIMAT0011532 | crm-miR-42 | 1 | ......__ | 6 | 75 |
MIMAT0011514 | crm-miR-35f | 1 | ......__ | 6 | 75 |
MIMAT0011513 | crm-miR-35e | 1 | ......__ | 6 | 75 |
MIMAT0011739 | crm-miR-35d | 1 | ......__ | 6 | 75 |
MIMAT0011512 | crm-miR-35c-3p | 1 | ......__ | 6 | 75 |
MIMAT0011511 | crm-miR-35b | 1 | ......__ | 6 | 75 |
MIMAT0011510 | crm-miR-35a | 1 | ......__ | 6 | 75 |
MIMAT0011506 | crm-miR-39 | 1 | ......__ | 6 | 75 |
MIMAT0011505 | crm-miR-40 | 1 | ......__ | 6 | 75 |
MIMAT0011504 | crm-miR-41 | 1 | ......__ | 6 | 75 |
MIMAT0011489 | cbr-miR-41b | 1 | ......__ | 6 | 75 |
MIMAT0011483 | cbr-miR-35b | 1 | ......__ | 6 | 75 |
MIMAT0011470 | cbr-miR-35d-3p | 1 | ......__ | 6 | 75 |
MIMAT0011468 | cbr-miR-35e | 1 | ......__ | 6 | 75 |
MIMAT0011467 | cbr-miR-35c | 1 | ......__ | 6 | 75 |
MIMAT0020940 | sbi-miR397-3p | 1 | ......__ | 6 | 75 |
MIMAT0011261 | sme-miR-36c-3p | 1 | ......__ | 6 | 75 |
MIMAT0011242 | sme-miR-36b-3p | 1 | ......__ | 6 | 75 |
MIMAT0009870 | cfa-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0009794 | nve-miR-2036-5p | 6 | ......__ | 1 | 75 |
MIMAT0019150 | bfl-miR-216-3p | 7 | _......_ | 2 | 75 |
MIMAT0009323 | bta-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0008234 | ptr-miR-553 | 8 | __...... | 3 | 75 |
MIMAT0008153 | ptr-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0007976 | ptr-miR-1250 | 6 | _......_ | 1 | 75 |
MIMAT0026902 | mml-miR-598-5p | 7 | ......__ | 2 | 75 |
MIMAT0006335 | mml-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0007662 | gga-miR-1755 | 7 | ......__ | 2 | 75 |
MIMAT0007634 | gga-miR-1732 | 1 | _......_ | 6 | 75 |
MIMAT0007580 | gga-miR-1689-3p | 7 | ......__ | 2 | 75 |
MIMAT0007059 | oan-miR-181c-3p | 2 | ......__ | 7 | 75 |
MIMAT0006901 | oan-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0005902 | hsa-miR-1250-5p | 6 | _......_ | 1 | 75 |
MIMAT0005536 | mcmv-miR-m01-3-5p | 6 | ......__ | 1 | 75 |
MIMAT0005324 | rno-miR-598-5p | 7 | ......__ | 2 | 75 |
MIMAT0005508 | dme-miR-990-5p | 3 | ......__ | 8 | 75 |
MIMAT0017283 | mmu-miR-598-5p | 7 | ......__ | 2 | 75 |
MIMAT0004115 | mdo-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0003982 | sme-miR-36a-3p | 1 | ......__ | 6 | 75 |
MIMAT0003775 | gga-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0003705 | xtr-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0026620 | hsa-miR-598-5p | 7 | ......__ | 2 | 75 |
MIMAT0003216 | hsa-miR-553 | 8 | __...... | 3 | 75 |
MIMAT0001634 | dre-miR-451 | 3 | __...... | 8 | 75 |
MIMAT0001633 | rno-miR-451-5p | 3 | __...... | 8 | 75 |
MIMAT0001632 | mmu-miR-451a | 3 | __...... | 8 | 75 |
MIMAT0001631 | hsa-miR-451a | 3 | __...... | 8 | 75 |
MIMAT0001318 | cbr-miR-41a | 1 | ......__ | 6 | 75 |
MIMAT0001317 | cbr-miR-40 | 1 | ......__ | 6 | 75 |
MIMAT0001316 | cbr-miR-39 | 1 | ......__ | 6 | 75 |
MIMAT0001315 | cbr-miR-38 | 1 | ......__ | 6 | 75 |
MIMAT0001314 | cbr-miR-36 | 1 | ......__ | 6 | 75 |
MIMAT0001313 | cbr-miR-35a | 1 | ......__ | 6 | 75 |
MIMAT0000013 | cel-miR-42-3p | 1 | ......__ | 6 | 75 |
MIMAT0000012 | cel-miR-41-3p | 1 | ......__ | 6 | 75 |
MIMAT0000011 | cel-miR-40-3p | 1 | ......__ | 6 | 75 |
MIMAT0000010 | cel-miR-39-3p | 1 | ......__ | 6 | 75 |
MIMAT0000009 | cel-miR-38-3p | 1 | ......__ | 6 | 75 |
MIMAT0000008 | cel-miR-37-3p | 1 | ......__ | 6 | 75 |
MIMAT0000007 | cel-miR-36-3p | 1 | ......__ | 6 | 75 |
MIMAT0000006 | cel-miR-35-3p | 1 | ......__ | 6 | 75 |