Result for your query miRNA sequence
>hcmv-miR-us33-3p
ucacgguc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tcacggtc8
MIMAT0004756hcmv-miR-US33-3p1........8100
MIMAT0023835cgr-miR-19738_.......287
MIMAT0035507bdi-miR94988.g......187
MIMAT0033866atr-miR8552c8......c.187
MIMAT0026440sbi-miR6231-5p8......a.187
MIMAT0025240ptc-miR6437a1......a.887
MIMAT0025225ptc-miR6437b1......a.887
MIMAT0037283ame-miR-98798_......_375
MIMAT0036743oha-miR-15b-3p8__......375
MIMAT0036694oha-miR-132-5p6_......_175
MIMAT0034747eca-miR-91692_......_775
MIMAT0034614eca-miR-90691_......_675
MIMAT0033870atr-miR8552d7......__275
MIMAT0033222ppc-miR-8338-2-3p1_......_675
MIMAT0032900ppc-miR-8228-5p7_......_275
MIMAT0032334ssa-miR-132-4-5p6_......_175
MIMAT0032333ssa-miR-132-3-5p6_......_175
MIMAT0032331ssa-miR-132-5p6_......_175
MIMAT0031647bbe-miR-216-3p1_......_675
MIMAT0030513prd-miR-7878-3p1__......675
MIMAT0029964mtr-miR2587g8__......375
MIMAT0029405ipu-miR-132a6_......_175
MIMAT0028168hcmv-miR-US29-3p3_......_875
MIMAT0025536bta-miR-65181......__675
MIMAT0024792hbr-miR61728__......375
MIMAT0023758cgr-miR-132-5p6_......_175
MIMAT0023678ame-miR-60541_......_675
MIMAT0022684hvsa-miR-HSUR4-5p6_......_175
MIMAT0021791aca-miR-15b-3p8__......375
MIMAT0021745aca-miR-132-5p6_......_175
MIMAT0020510dme-miR-2535b-3p3......__875
MIMAT0019682osa-miR812o-3p3__......875
MIMAT0018679tca-miR-3825-3p6_......_175
MIMAT0016816cin-miR-4197-5p1_......_675
MIMAT0016799cin-miR-4183-3p8......__375
MIMAT0017774esi-miR3467-3p2__......775
MIMAT0015550bmo-miR-33648......__375
MIMAT0014795api-miR-30532_......_775
MIMAT0020948osa-miR2871a-5p6__......175
MIMAT0013419mtr-miR2647c3......__875
MIMAT0013418mtr-miR2647b3......__875
MIMAT0013417mtr-miR2647a3......__875
MIMAT0013257mtr-miR2587f8__......375
MIMAT0013256mtr-miR2587e8__......375
MIMAT0013255mtr-miR2587d8__......375
MIMAT0013254mtr-miR2587c8__......375
MIMAT0013253mtr-miR2587b8__......375
MIMAT0013252mtr-miR2587a8__......375
MIMAT0012325dps-miR-2535-3p3......__875
MIMAT0009697aqu-miR-2019-3p1_......_675
MIMAT0019150bfl-miR-216-3p1_......_675
MIMAT0009448hsa-miR-19736_......_175
MIMAT0007820osa-miR18681......__675
MIMAT0026816mml-miR-132-5p6_......_175
MIMAT0007634gga-miR-17327_......_275
MIMAT0005358tae-miR11237......__275
MIMAT0005256smo-miR11003......__875
MIMAT0004404cre-miR9173......__875
MIMAT0026693mdo-miR-132-5p6_......_175
MIMAT0003403dre-miR-132-5p6_......_175
MIMAT0001303cbr-miR-3607__......275
MIMAT0017123rno-miR-132-5p6_......_175
MIMAT0000702cel-miR-360-3p7__......275
MIMAT0004594hsa-miR-132-5p6_......_175
MIMAT0000323cel-miR-2677......__275
MIMAT0016984mmu-miR-132-5p7_......_275