Result for your query miRNA sequence
>wssv-miR36-5p
uccagggu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tccagggt8
MIMAT0037023ssc-miR-9805-3p2_.......887
MIMAT0034917efu-miR-9279a7......._187
MIMAT0034463eca-miR-89348......._287
MIMAT0034325cfa-miR-88321......._787
MIMAT0028123hsa-miR-7113-5p1......._787
MIMAT0027968mmu-miR-7032-5p2_.......887
MIMAT0027882mmu-miR-6990-5p2_.......887
MIMAT0025720gga-miR-6624-3p1......._787
MIMAT0025125mmu-miR-63798......._287
MIMAT0025020hme-miR-6312-3p8_.......287
MIMAT0024163ggo-miR-5048_.......287
MIMAT0017966ssc-miR-4334-5p7......._187
MIMAT0016861hsa-miR-43088......._287
MIMAT0036084chi-miR-23318.g......187
MIMAT0030031oar-miR-10b8.a......187
MIMAT0028404mmu-miR-7218-5p1.g......887
MIMAT0024953hme-miR-27568.a......187
MIMAT0024932hme-miR-108.a......187
MIMAT0021531asu-miR-993-5p8.a......187
MIMAT0020206dme-miR-4976-5p1......c.887
MIMAT0018416nlo-miR-108.a......187
MIMAT0015676nvi-miR-108.a......187
MIMAT0014404cqu-miR-10-5p8.a......187
MIMAT0014277aae-miR-108.a......187
MIMAT0014128api-miR-108.a......187
MIMAT0013623bmo-miR-2756-5p8.a......187
MIMAT0011909bta-miR-2367-5p8.a......187
MIMAT0011864bta-miR-2331-3p8.g......187
MIMAT0009082dya-miR-108.a......187
MIMAT0009033dwi-miR-108.a......187
MIMAT0008960dvi-miR-10-5p8.a......187
MIMAT0008887dsi-miR-108.a......187
MIMAT0008784dse-miR-108.a......187
MIMAT0008754dpe-miR-108.a......187
MIMAT0008693dmo-miR-108.a......187
MIMAT0008601dgr-miR-108.a......187
MIMAT0008549der-miR-108.a......187
MIMAT0008476dan-miR-108.a......187
MIMAT0007979ptr-miR-12548......c.187
MIMAT0005905hsa-miR-12548......c.187
MIMAT0004419ame-miR-108.a......187
MIMAT0004392cre-miR909.31.t......887
MIMAT0004195bmo-miR-10-5p8.a......187
MIMAT0001497aga-miR-108.a......187
MIMAT0001214dps-miR-108.a......187
MIMAT0000115dme-miR-10-5p8.a......187
MIMAT0037172ata-miR6201-5p8__......375
MIMAT0037065ssc-miR-9846-3p8......__375
MIMAT0037040ssc-miR-9822-3p7......__275
MIMAT0037039ssc-miR-9821-5p7......__275
MIMAT0036992tae-miR62018__......375
MIMAT0036952oha-miR-875-3p6......__175
MIMAT0036664oha-miR-10c-5p7__......275
MIMAT0036662oha-miR-10b-5p7__......275
MIMAT0036660oha-miR-10a-5p7__......275
MIMAT0036605tch-miR-5048__......375
MIMAT0036471tch-miR-10b-5p7__......275
MIMAT0036268chi-miR-5048__......375
MIMAT0036146chi-miR-331-3p7_......_275
MIMAT0035913chi-miR-10b-5p7__......275
MIMAT0035911chi-miR-10a-5p7__......275
MIMAT0035735rno-miR-1956-5p3......__875
MIMAT0035604dvi-miR-993-5p8__......375
MIMAT0035308gsa-miR-10b-5p7__......275
MIMAT0035306gsa-lin-4-5p6__......175
MIMAT0035225dme-miR-9381-5p2_......_775
MIMAT0035199efu-miR-5048__......375
MIMAT0035148efu-miR-3318_......_375
MIMAT0034863efu-miR-9246c8_......_375
MIMAT0034791efu-miR-92048_......_375
MIMAT0034729eca-miR-91533......__875
MIMAT0034722eca-miR-91467......__275
MIMAT0034672eca-miR-91227......__275
MIMAT0034439eca-miR-89116......__175
MIMAT0033793pxy-miR-10-5p7__......275
MIMAT0032999ppc-miR-57-5p7__......275
MIMAT0032677ssa-miR-729-5p1__......675
MIMAT0032654ssa-miR-462a-3p6......__175
MIMAT0032299ssa-miR-10d-5p7__......275
MIMAT0032295ssa-miR-10b-5p7__......275
MIMAT0032292ssa-miR-10a-5p7__......275
MIMAT0031576bbe-miR-10c-5p7__......275
MIMAT0031574bbe-miR-10b-5p7__......275
MIMAT0031572bbe-miR-10a-5p7__......275
MIMAT0030348hhi-miR-10d7__......275
MIMAT0030030oar-miR-10a7__......275
MIMAT0032193lva-miR-10-5p7__......275
MIMAT0032143pmi-miR-10-5p7__......275
MIMAT0029773cbn-miR-577__......275
MIMAT0029394ipu-miR-10d7__......275
MIMAT0029393ipu-miR-10c7__......275
MIMAT0029392ipu-miR-10b7__......275
MIMAT0029391ipu-miR-10a7__......275
MIMAT0031150aja-miR-3318_......_375
MIMAT0028527mdo-miR-7276-3p3_......_875
MIMAT0028511mdo-miR-7270-3p1......__675
MIMAT0028420mmu-miR-7226-5p2_......_775
MIMAT0028413mmu-miR-7222-3p1......__675
MIMAT0026202ccr-miR-10d7__......275
MIMAT0026201ccr-miR-10c7__......275
MIMAT0026200ccr-miR-10b7__......275
MIMAT0028043mmu-miR-7068-3p8__......375
MIMAT0027970mmu-miR-7033-5p3......__875
MIMAT0027951mmu-miR-7023-3p8__......375
MIMAT0027941mmu-miR-7018-3p8__......375
MIMAT0027939mmu-miR-7017-3p6__......175
MIMAT0027800mmu-miR-6950-5p7......__275
MIMAT0027604hsa-miR-6852-5p6_......_175
MIMAT0027576hsa-miR-6837-5p2_......_775
MIMAT0027546hsa-miR-6823-5p2__......775
MIMAT0027496hsa-miR-6798-5p1_......_675
MIMAT0027482hsa-miR-6791-5p7_......_275
MIMAT0027428hsa-miR-6764-5p3_......_875
MIMAT0027408hsa-miR-6754-5p1_......_675
MIMAT0027406hsa-miR-6753-5p3_......_875
MIMAT0027366hsa-miR-6732-3p8__......375
MIMAT0025812gga-miR-6702-5p3_......_875
MIMAT0025741gga-miR-6643-5p1_......_675
MIMAT0025528bta-miR-65172__......775
MIMAT0025422pol-miR-10b-5p7__......275
MIMAT0025097mmu-miR-63548_......_375
MIMAT0025023sma-miR-10-5p7__......275
MIMAT0024952hme-miR-27557__......275
MIMAT0024828hvu-miR62018__......375
MIMAT0024490mse-miR-10b7__......275
MIMAT0024467mse-miR-9937__......275
MIMAT0024442mse-miR-27557__......275
MIMAT0024394ppy-miR-151b1......__675
MIMAT0024128ggo-miR-3318_......_375
MIMAT0023978cgr-miR-5048__......375
MIMAT0023917cgr-miR-331-3p8_......_375
MIMAT0023830cgr-miR-19563......__875
MIMAT0023737cgr-miR-10b-5p7__......275
MIMAT0023735cgr-miR-10a-5p7__......275
MIMAT0022817sha-miR-10a7__......275
MIMAT0022799sha-miR-10b7__......275
MIMAT0022651ola-miR-10b7__......275
MIMAT0022633ola-miR-10d7__......275
MIMAT0023058tur-miR-993a-5p7__......275
MIMAT0023054tur-miR-5729a-5p6__......175
MIMAT0023052tur-miR-993b-5p7__......275
MIMAT0023038tur-miR-5729b-5p6__......175
MIMAT0023026tur-miR-10-5p7__......275
MIMAT0022044aca-miR-54241__......675
MIMAT0021721aca-miR-10c-5p7__......275
MIMAT0021719aca-miR-10b-5p7__......275
MIMAT0021717aca-miR-10a-5p7__......275
MIMAT0021483asu-miR-87b-5p8......__375
MIMAT0021464asu-miR-57-5p7__......275
MIMAT0020262emu-miR-107__......275
MIMAT0020236egr-miR-107__......275
MIMAT0020210dme-miR-4978-5p7......__275
MIMAT0019843hsa-miR-4725-5p8__......375
MIMAT0019771hsa-miR-4685-5p2_......_775
MIMAT0019755hsa-miR-46731......__675
MIMAT0019696hsa-miR-4638-3p6......__175
MIMAT0019489pma-miR-181b-3p1_......_675
MIMAT0019378pma-miR-10a7__......275
MIMAT0019376pma-miR-10b-5p7__......275
MIMAT0018618tgu-miR-10a-5p7__......275
MIMAT0018564ame-miR-37857__......275
MIMAT0018119hsa-miR-36907......__275
MIMAT0018001hsa-miR-3620-3p8__......375
MIMAT0017974ssc-miR-4842_......_775
MIMAT0016919hsa-miR-42927_......_275
MIMAT0016884hsa-miR-42547......__275
MIMAT0016626cin-miR-4069-5p8__......375
MIMAT0016581cin-miR-4046-5p1__......675
MIMAT0017898rno-miR-3594-5p2_......_775
MIMAT0017831rno-miR-3561-3p3......__875
MIMAT0016334ahy-miR3511-5p2_......_775
MIMAT0016253sja-miR-10-5p7__......275
MIMAT0016243ppy-miR-19153_......_875
MIMAT0016114ppy-miR-875-3p6......__175
MIMAT0016061ppy-miR-6198......__375
MIMAT0015927ppy-miR-5048__......375
MIMAT0015836ppy-miR-331-3p8_......_375
MIMAT0015730ppy-miR-10b7__......275
MIMAT0015646mmu-miR-34746_......_175
MIMAT0014978hsa-miR-31168......__375
MIMAT0014458tgu-miR-29598......__375
MIMAT0014375cqu-miR-993-5p7__......275
MIMAT0014266aae-miR-9937__......275
MIMAT0014105bma-miR-577__......275
MIMAT0013931ssc-miR-5048__......375
MIMAT0013930ssc-miR-331-3p8_......_375
MIMAT0013885ssc-miR-10b7__......275
MIMAT0013884ssc-miR-10a-5p7__......275
MIMAT0013852bta-miR-28948_......_375
MIMAT0013228eca-miR-5048__......375
MIMAT0013188eca-miR-3318_......_375
MIMAT0013090eca-miR-10b7__......275
MIMAT0013019eca-miR-10a7__......275
MIMAT0012830rno-miR-5048__......375
MIMAT0013616bmo-miR-2755-3p7__......275
MIMAT0012682isc-miR-107__......275
MIMAT0012636dpu-miR-107__......275
MIMAT0013551cte-miR-19918__......375
MIMAT0012461dsi-miR-993-5p8__......375
MIMAT0012263dps-miR-993-5p8__......375
MIMAT0012063bta-miR-24722__......775
MIMAT0011994bta-miR-2425-5p1_......_675
MIMAT0011691ppc-miR-2240c3_......_875
MIMAT0011689ppc-miR-2240b3_......_875
MIMAT0011509crm-miR-577__......275
MIMAT0011223sme-miR-10a-5p7__......275
MIMAT0010144lmi-miR-10-5p7__......275
MIMAT0015297bmo-miR-993b-5p7__......275
MIMAT0019182tca-miR-993-5p7__......275
MIMAT0009907cfa-miR-5048__......375
MIMAT0009895cfa-miR-3318_......_375
MIMAT0009798nve-miR-2038-5p6__......175
MIMAT0009654spu-miR-107__......275
MIMAT0009611sko-miR-107__......275
MIMAT0009563lgi-miR-107__......275
MIMAT0009511cte-miR-10c7__......275
MIMAT0009510cte-miR-10b8__......375
MIMAT0009509cte-miR-10a7__......275
MIMAT0009469bfl-miR-10c7__......275
MIMAT0009468bfl-miR-10b7__......275
MIMAT0009466bfl-miR-10a-5p7__......275
MIMAT0009428mmu-miR-19563......__875
MIMAT0009340bta-miR-5048__......375
MIMAT0032097dvi-miR-284-5p6......__175
MIMAT0008357tca-miR-10-5p7__......275
MIMAT0008281ptr-miR-6198......__375
MIMAT0008177ptr-miR-5048__......375
MIMAT0008103ptr-miR-3318_......_375
MIMAT0007945ptr-miR-10b7__......275
MIMAT0007944ptr-miR-10a7__......275
MIMAT0007892hsa-miR-1915-3p3_......_875
MIMAT0006737cfa-miR-10a7__......275
MIMAT0006518mml-miR-875-3p6......__175
MIMAT0006368mml-miR-504-5p8__......375
MIMAT0006273mml-miR-331-3p8_......_375
MIMAT0006162mml-miR-10b-5p7__......275
MIMAT0006161mml-miR-10a-5p7__......275
MIMAT0007731gga-miR-10a-5p7__......275
MIMAT0007412gga-miR-1555-3p1__......675
MIMAT0006044odi-miR-14916__......175
MIMAT0007218oan-miR-10b-5p7__......275
MIMAT0007122oan-miR-10a-5p7__......275
MIMAT0006953oan-miR-13562_......_775
MIMAT0022940hsa-miR-1178-5p1__......675
MIMAT0004480hiv1-miR-H11_......_675
MIMAT0020893dme-miR-993-5p7__......275
MIMAT0005498dme-miR-982-5p7......__275
MIMAT0022939hsa-miR-939-3p6_......_175
MIMAT0004923hsa-miR-875-3p6......__175
MIMAT0004889mmu-miR-504-5p8__......375
MIMAT0004339bta-miR-331-3p8_......_375
MIMAT0004090mdo-miR-10b-5p8__......375
MIMAT0004089mdo-miR-10a-5p7__......275
MIMAT0003973sme-miR-10b-5p7__......275
MIMAT0003839bta-miR-10b7__......275
MIMAT0003786bta-miR-10a7__......275
MIMAT0003773fru-miR-10d7__......275
MIMAT0003772tni-miR-10d7__......275
MIMAT0003559xtr-miR-10c7__......275
MIMAT0003558xtr-miR-10b7__......275
MIMAT0003557xtr-miR-10a7__......275
MIMAT0004815ebv-miR-BART7-5p6......__175
MIMAT0003288hsa-miR-619-3p8......__375
MIMAT0003088tni-miR-10c7__......275
MIMAT0003087fru-miR-10c7__......275
MIMAT0002964tni-miR-10b7__......275
MIMAT0002963fru-miR-10b7__......275
MIMAT0002875hsa-miR-504-5p8__......375
MIMAT0002493ppa-miR-10b7__......275
MIMAT0002492mne-miR-10b7__......275
MIMAT0002491ggo-miR-10b7__......275
MIMAT0002490ppa-miR-10a7__......275
MIMAT0002489age-miR-10a7__......275
MIMAT0002488sla-miR-10a7__......275
MIMAT0002487ppy-miR-10a7__......275
MIMAT0002486ggo-miR-10a7__......275
MIMAT0001771dre-miR-10d-5p7__......275
MIMAT0001770dre-miR-10c-5p7__......275
MIMAT0004754hcmv-miR-UL36-3p3......__875
MIMAT0001268dre-miR-10b-5p7__......275
MIMAT0001267dre-miR-10a-5p7__......275
MIMAT0001148gga-miR-10b-5p7__......275
MIMAT0000782rno-miR-10a-5p7__......275
MIMAT0000760hsa-miR-331-3p8_......_375
MIMAT0000648mmu-miR-10a-5p7__......275
MIMAT0000571mmu-miR-331-3p8_......_375
MIMAT0000570rno-miR-331-3p8_......_375
MIMAT0000477cbr-miR-577__......275
MIMAT0020811dme-miR-284-5p6......__175
MIMAT0000254hsa-miR-10b-5p7__......275
MIMAT0000253hsa-miR-10a-5p7__......275
MIMAT0000208mmu-miR-10b-5p7__......275
MIMAT0000029cel-miR-57-5p7__......275