Result for your query miRNA sequence
>dev-miR-d1-3p
uccucuug

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tcctcttg8
MIMAT0028170dev-miR-D1-3p1........8100
MIMAT0026047mdm-miR7121h1........8100
MIMAT0026046mdm-miR7121g1........8100
MIMAT0026045mdm-miR7121f1........8100
MIMAT0026044mdm-miR7121e1........8100
MIMAT0026043mdm-miR7121d1........8100
MIMAT0026042mdm-miR7121c1........8100
MIMAT0026041mdm-miR7121b1........8100
MIMAT0026040mdm-miR7121a1........8100
MIMAT0036301chi-miR-877-3p1......._787
MIMAT0034885efu-miR-9189g1_.......787
MIMAT0034736eca-miR-91591......._787
MIMAT0028078mmu-miR-7086-5p7......._187
MIMAT0027823mmu-miR-6961-3p1......._787
MIMAT0027663hsa-miR-6881-3p2......._887
MIMAT0023353hco-miR-5902-3p7......._187
MIMAT0018190hsa-miR-39167......._187
MIMAT0006473mml-miR-627-3p1......._787
MIMAT0007501gga-miR-16308......._287
MIMAT0004950hsa-miR-877-3p1......._787
MIMAT0003715ebv-miR-BART17-5p8......._287
MIMAT0037254ata-miR5084-5p2......__775
MIMAT0037005ssc-miR-9788-3p6......__175
MIMAT0036618tch-miR-335-5p7__......275
MIMAT0036300chi-miR-877-5p8......__375
MIMAT0036147chi-miR-335-5p7__......275
MIMAT0035915chi-miR-1185-5p6......__175
MIMAT0035850bra-miR395a-5p3......__875
MIMAT0035848bra-miR395c-5p3......__875
MIMAT0035846bra-miR395b-5p3......__875
MIMAT0035844bra-miR395d-5p3......__875
MIMAT0035382nve-miR-2041b-3p8......__375
MIMAT0035380nve-miR-2041b8......__375
MIMAT0035348gsa-miR-9394b-5p6......__175
MIMAT0035059efu-miR-3357__......275
MIMAT0035057efu-miR-2028_......_375
MIMAT0034737eca-miR-91608__......375
MIMAT0034681eca-miR-91303......__875
MIMAT0034560eca-miR-90198_......_375
MIMAT0034434cfa-miR-89061......__675
MIMAT0034061gra-miR86886......__175
MIMAT0033452str-miR-8392-5p3__......875
MIMAT0033210ppc-miR-8333-5p8__......375
MIMAT0032740ssa-miR-8158-5p6_......_175
MIMAT0032482ssa-miR-202-5p7_......_275
MIMAT0032284ssa-miR-103-5p3_......_875
MIMAT0031852cpa-miR81547......__275
MIMAT0030449bta-miR-78643......__875
MIMAT0032256rgl-miR78106......__175
MIMAT0029802mmu-miR-7650-5p3......__875
MIMAT0029794mmu-miR-7646-5p7__......275
MIMAT0028840mdo-miR-7386h-5p1__......675
MIMAT0028625mdo-miR-7312-3p2......__775
MIMAT0028546mdo-miR-7285-5p6......__175
MIMAT0028522mdo-miR-7274-5p8__......375
MIMAT0028246mml-miR-3059-5p3......__875
MIMAT0028120hsa-miR-7111-3p2......__775
MIMAT0028074mmu-miR-7084-5p7......__275
MIMAT0028068mmu-miR-7081-5p6......__175
MIMAT0027969mmu-miR-7032-3p2......__775
MIMAT0027933mmu-miR-7014-3p1_......_675
MIMAT0027827mmu-miR-6963-3p3_......_875
MIMAT0027748mmu-miR-6924-5p6......__175
MIMAT0027618hsa-miR-6859-5p7......__275
MIMAT0027605hsa-miR-6852-3p3......__875
MIMAT0027594hsa-miR-6847-5p8......__375
MIMAT0027463hsa-miR-6781-3p3_......_875
MIMAT0027461hsa-miR-6780a-3p2......__775
MIMAT0025729gga-miR-6633-5p6......__175
MIMAT0025673gga-miR-6583-5p6......__175
MIMAT0025648gga-miR-6570-3p6......__175
MIMAT0027329ppe-miR62937_......_275
MIMAT0024314mml-miR-1185-5p6......__175
MIMAT0024297ggo-miR-2026_......_175
MIMAT0024173ggo-miR-11856......__175
MIMAT0024155ggo-miR-8778......__375
MIMAT0024122ggo-miR-3357__......275
MIMAT0023666ame-miR-60446_......_175
MIMAT0023651bna-miR60316_......_175
MIMAT0022359mmu-miR-5616-5p3......__875
MIMAT0021849aca-miR-202-5p.28_......_375
MIMAT0021611gma-miR53732__......775
MIMAT0021401rmi-miR-53288......__375
MIMAT0021320mtr-miR5281a1__......675
MIMAT0020621mmu-miR-51138......__375
MIMAT0020056sko-miR-4830d-5p2__......775
MIMAT0020042sko-miR-4830b-5p1__......675
MIMAT0020041sko-miR-4830a1__......675
MIMAT0019888hsa-miR-47516......__175
MIMAT0019619pma-miR-45866__......175
MIMAT0019549pma-miR-430b6__......175
MIMAT0019442pma-miR-103b-5p3_......_875
MIMAT0019288oar-miR-1185-5p6......__175
MIMAT0018326gma-miR44077......__275
MIMAT0018183hsa-miR-39093......__875
MIMAT0018791tca-miR-3859-3p7_......_275
MIMAT0016782cin-miR-4173-3p8__......375
MIMAT0016390gga-miR-35397......__275
MIMAT0016365vvi-miR2111-3p2......__775
MIMAT0016178ppy-miR-12536......__175
MIMAT0016166ppy-miR-12361_......_675
MIMAT0016148ppy-miR-11856......__175
MIMAT0016117ppy-miR-8778......__375
MIMAT0016026ppy-miR-5838_......_375
MIMAT0015985ppy-miR-526b1__......675
MIMAT0015837ppy-miR-3357__......275
MIMAT0017680aly-miR163-3p.18_......_375
MIMAT0017665aly-miR395g-5p3......__875
MIMAT0017613aly-miR831-5p8_......_375
MIMAT0017553aly-miR395e-5p3......__875
MIMAT0014988hsa-miR-31257......__275
MIMAT0014646tgu-miR-130b-5p1_......_675
MIMAT0014498tgu-miR-29881_......_675
MIMAT0013955ssc-miR-3357__......275
MIMAT0013123eca-miR-11856......__175
MIMAT0012942eca-miR-3357__......275
MIMAT0012776mml-miR-526b1__......675
MIMAT0013584cte-miR-27153......__875
MIMAT0013518hsa-miR-2682-3p3_......_875
MIMAT0013494mtr-miR2673b1_......_675
MIMAT0013493mtr-miR2673a1_......_675
MIMAT0012530dsi-miR-2584-3p7_......_275
MIMAT0012217dme-miR-2501-3p2__......775
MIMAT0012036bta-miR-2454-3p3......__875
MIMAT0009973bta-miR-11856......__175
MIMAT0009781nve-miR-2030-3p1_......_675
MIMAT0009381bta-miR-8778......__375
MIMAT0009291bta-miR-3357__......275
MIMAT0008256ptr-miR-5838_......_375
MIMAT0008211ptr-miR-526b1__......675
MIMAT0008104ptr-miR-3357__......275
MIMAT0007968ptr-miR-12361_......_675
MIMAT0007953ptr-miR-11856......__175
MIMAT0007787osa-miR1858b7......__275
MIMAT0007786osa-miR1858a7......__275
MIMAT0006686cfa-miR-18416......__175
MIMAT0006624cfa-miR-3357__......275
MIMAT0026911mml-miR-877-3p1_......_675
MIMAT0006521mml-miR-877-5p8......__375
MIMAT0006445mml-miR-5838_......_375
MIMAT0006274mml-miR-335-5p7__......275
MIMAT0007528gga-miR-16501......__675
MIMAT0007424gga-miR-1564-3p2......__775
MIMAT0006952oan-miR-1355-3p3......__875
MIMAT0005591hsa-miR-1236-3p1_......_675
MIMAT0005533mcmv-miR-m01-16......__175
MIMAT0005285rno-miR-8778......__375
MIMAT0004949hsa-miR-877-5p8......__375
MIMAT0004862mmu-miR-877-3p3......__875
MIMAT0004861mmu-miR-877-5p8......__375
MIMAT0014811mmu-miR-3059-5p3......__875
MIMAT0005798hsa-miR-1185-5p6......__175
MIMAT0003248hsa-miR-5838_......_375
MIMAT0002835hsa-miR-526b-5p1__......675
MIMAT0026530gga-miR-130b-5p1_......_675
MIMAT0017142rno-miR-185-3p3......__875
MIMAT0000766mmu-miR-335-5p7__......275
MIMAT0000765hsa-miR-335-5p7__......275
MIMAT0000575rno-miR-3357__......275