VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mcmv-miR-m23-1-3p
uccugcg

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcctgcg`	7
MIMAT0031534	ppe-miR3627-5p	8	`.......`	2	100
MIMAT0031245	stu-miR3627-5p	8	`.......`	2	100
MIMAT0026018	mdm-miR3627c	8	`.......`	2	100
MIMAT0026017	mdm-miR3627b	8	`.......`	2	100
MIMAT0026016	mdm-miR3627a	8	`.......`	2	100
MIMAT0024062	ptr-miR-3193	2	`.......`	8	100
MIMAT0024018	cgr-miR-6091	1	`.......`	7	100
MIMAT0023143	mtr-miR5225c	8	`.......`	2	100
MIMAT0023142	mtr-miR5225b	8	`.......`	2	100
MIMAT0022688	sly-miR4376	8	`.......`	2	100
MIMAT0021144	mtr-miR5211	8	`.......`	2	100
MIMAT0018706	tca-miR-308-5p	7	`.......`	1	100
MIMAT0015077	hsa-miR-3193	1	`.......`	7	100
MIMAT0007401	hsa-miR-1539	1	`.......`	7	100
MIMAT0005543	mcmv-miR-M23-1-3p	2	`.......`	8	100
MIMAT0035842	bra-miR391-5p	8	`_......`	3	85
MIMAT0035223	dme-miR-9380-5p	3	`......_`	8	85
MIMAT0034391	cfa-miR-8887	1	`......_`	6	85
MIMAT0033955	esi-miR8620	1	`......_`	6	85
MIMAT0033802	pxy-miR-8510a-8-3p	7	`_......`	2	85
MIMAT0033735	pxy-miR-8510b-3p	7	`_......`	2	85
MIMAT0033733	pxy-miR-8510a-3p	7	`_......`	2	85
MIMAT0031658	bbe-miR-252b-3p	2	`_......`	7	85
MIMAT0031274	stu-miR4376-5p	8	`_......`	3	85
MIMAT0030201	bdi-miR7733-3p	1	`_......`	6	85
MIMAT0028575	mdo-miR-7295-3p	2	`_......`	7	85
MIMAT0026379	bma-miR-5879b	6	`......_`	1	85
MIMAT0026019	mdm-miR391	8	`_......`	3	85
MIMAT0027672	hsa-miR-6886-5p	8	`_......`	3	85
MIMAT0027574	hsa-miR-6836-5p	6	`_......`	1	85
MIMAT0027395	hsa-miR-6747-3p	1	`......_`	6	85
MIMAT0027356	hsa-miR-6727-3p	1	`......_`	6	85
MIMAT0025142	mmu-miR-6392-3p	8	`_......`	3	85
MIMAT0025114	mmu-miR-6370	6	`......_`	1	85
MIMAT0025073	rno-miR-6332	6	`_......`	1	85
MIMAT0024782	hsa-miR-6165	8	`......_`	3	85
MIMAT0024311	mml-miR-873-5p	6	`......_`	1	85
MIMAT0024167	ggo-miR-873	6	`......_`	1	85
MIMAT0023693	hsa-miR-6068	1	`_......`	6	85
MIMAT0023258	osa-miR5791	8	`......_`	3	85
MIMAT0023077	tur-miR-252-3p	1	`......_`	6	85
MIMAT0022390	ath-miR5631	8	`......_`	3	85
MIMAT0022354	mmu-miR-3544-3p	3	`......_`	8	85
MIMAT0021243	mtr-miR5247	6	`......_`	1	85
MIMAT0019235	hsa-miR-4520-5p	1	`_......`	6	85
MIMAT0018952	hsa-miR-4436a	6	`......_`	1	85
MIMAT0018280	gma-miR4376-5p	8	`_......`	3	85
MIMAT0018545	ame-miR-3770	3	`......_`	8	85
MIMAT0016280	sja-miR-3480-5p	6	`......_`	1	85
MIMAT0016111	ppy-miR-873	6	`......_`	1	85
MIMAT0017537	aly-miR391-5p	8	`_......`	3	85
MIMAT0015590	bmo-miR-3389-3p	2	`_......`	7	85
MIMAT0019208	hsa-miR-3074-5p	3	`......_`	8	85
MIMAT0014856	mmu-miR-3074-5p	3	`......_`	8	85
MIMAT0014452	tgu-miR-1677-5p	1	`......_`	6	85
MIMAT0013120	eca-miR-873	6	`......_`	1	85
MIMAT0012710	hvt-miR-H1	7	`_......`	2	85
MIMAT0013630	bmo-miR-2758-3p	2	`_......`	7	85
MIMAT0012466	dsi-miR-252-3p	1	`......_`	6	85
MIMAT0012262	dps-miR-252-3p	1	`......_`	6	85
MIMAT0011469	cbr-miR-35d-5p	6	`_......`	1	85
MIMAT0011205	gga-miR-2129	8	`......_`	3	85
MIMAT0019151	bfl-miR-252b-3p	2	`_......`	7	85
MIMAT0009451	hsa-miR-1976	3	`......_`	8	85
MIMAT0009377	bta-miR-873	6	`......_`	1	85
MIMAT0008324	ptr-miR-873	6	`......_`	1	85
MIMAT0007883	hsa-miR-1909-3p	6	`_......`	1	85
MIMAT0007724	gga-miR-1806	8	`......_`	3	85
MIMAT0007562	gga-miR-1677-5p	1	`......_`	6	85
MIMAT0007526	gga-miR-1649-5p	1	`......_`	6	85
MIMAT0005359	tae-miR1124	6	`......_`	1	85
MIMAT0005339	rno-miR-873-5p	6	`......_`	1	85
MIMAT0020896	dme-miR-252-3p	1	`......_`	6	85
MIMAT0004953	hsa-miR-873-5p	6	`......_`	1	85
MIMAT0004936	mmu-miR-873a-5p	6	`......_`	1	85
MIMAT0003911	ppt-miR1219d	3	`......_`	8	85
MIMAT0003910	ppt-miR1219c	3	`......_`	8	85
MIMAT0003909	ppt-miR1219b	3	`......_`	8	85
MIMAT0003908	ppt-miR1219a	3	`......_`	8	85
MIMAT0003467	mmu-miR-688	7	`_......`	2	85
MIMAT0000933	ath-miR391-5p	8	`_......`	3	85