| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tcgaagaa | 8 | ||
| MIMAT0017713 | aly-miR3441-5p.2 | 1 | _....... | 7 | 87 |
| MIMAT0007816 | osa-miR1865-3p | 1 | _....... | 7 | 87 |
| MIMAT0003939 | ath-miR780.2 | 7 | _....... | 1 | 87 |
| MIMAT0034852 | efu-miR-9234c | 8 | .g...... | 1 | 87 |
| MIMAT0031201 | stu-miR8024a-5p | 1 | .t...... | 8 | 87 |
| MIMAT0030384 | ptc-miR7825 | 1 | .t...... | 8 | 87 |
| MIMAT0030334 | hhi-miR-7790 | 1 | .g...... | 8 | 87 |
| MIMAT0022402 | ath-miR5641 | 1 | .g...... | 8 | 87 |
| MIMAT0020524 | ath-miR5020a | 1 | .g...... | 8 | 87 |
| MIMAT0018861 | tca-miR-3882-3p | 1 | .g...... | 8 | 87 |
| MIMAT0010150 | mcv-miR-M1-5p | 1 | .g...... | 8 | 87 |
| MIMAT0032075 | dvi-miR-2b-5p | 8 | .t...... | 1 | 87 |
| MIMAT0006070 | csa-miR-1497 | 1 | .t...... | 8 | 87 |
| MIMAT0006068 | cin-miR-1497-3p | 1 | .t...... | 8 | 87 |
| MIMAT0006057 | odi-miR-1497h | 1 | .t...... | 8 | 87 |
| MIMAT0006056 | odi-miR-1497g | 1 | .t...... | 8 | 87 |
| MIMAT0006055 | odi-miR-1497f | 1 | .t...... | 8 | 87 |
| MIMAT0006054 | odi-miR-1497e | 1 | .t...... | 8 | 87 |
| MIMAT0006053 | odi-miR-1497d | 1 | .t...... | 8 | 87 |
| MIMAT0006052 | odi-miR-1497c | 1 | .t...... | 8 | 87 |
| MIMAT0006051 | odi-miR-1497b | 1 | .t...... | 8 | 87 |
| MIMAT0006050 | odi-miR-1497a | 1 | .t...... | 8 | 87 |
| MIMAT0020783 | dme-miR-2b-2-5p | 8 | .t...... | 1 | 87 |
| MIMAT0036075 | chi-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0035763 | tae-miR9656-3p | 6 | ......__ | 1 | 75 |
| MIMAT0035173 | efu-miR-9362 | 6 | _......_ | 1 | 75 |
| MIMAT0034685 | eca-miR-9134 | 1 | ......__ | 6 | 75 |
| MIMAT0034627 | eca-miR-9082 | 6 | __...... | 1 | 75 |
| MIMAT0034438 | eca-miR-8910 | 2 | __...... | 7 | 75 |
| MIMAT0032836 | cel-miR-8209-3p | 8 | __...... | 3 | 75 |
| MIMAT0032546 | ssa-miR-22b-5p | 8 | __...... | 3 | 75 |
| MIMAT0032544 | ssa-miR-22a-5p | 8 | __...... | 3 | 75 |
| MIMAT0030909 | stu-miR8013 | 2 | __...... | 7 | 75 |
| MIMAT0030327 | bdi-miR7785-3p | 7 | __...... | 2 | 75 |
| MIMAT0030066 | bdi-miR397b-3p | 6 | ......__ | 1 | 75 |
| MIMAT0029888 | mmu-miR-216c-5p | 1 | __...... | 6 | 75 |
| MIMAT0029013 | oan-miR-7431-3p | 1 | __...... | 6 | 75 |
| MIMAT0028715 | mdo-miR-7351-3p | 2 | __...... | 7 | 75 |
| MIMAT0027793 | mmu-miR-6946-3p | 7 | __...... | 2 | 75 |
| MIMAT0027651 | hsa-miR-6875-3p | 7 | __...... | 2 | 75 |
| MIMAT0025470 | hsa-miR-6507-5p | 1 | __...... | 6 | 75 |
| MIMAT0025426 | pol-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0023856 | cgr-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0023573 | tca-miR-6016-5p | 2 | __...... | 7 | 75 |
| MIMAT0023543 | ame-miR-6002-5p | 1 | ......__ | 6 | 75 |
| MIMAT0021887 | aca-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0020554 | bdi-miR5056 | 3 | __...... | 8 | 75 |
| MIMAT0019937 | hsa-miR-4778-3p | 8 | __...... | 3 | 75 |
| MIMAT0019752 | hsa-miR-4671-5p | 3 | _......_ | 8 | 75 |
| MIMAT0019734 | hsa-miR-4659b-3p | 7 | __...... | 2 | 75 |
| MIMAT0019727 | hsa-miR-4659a-3p | 7 | __...... | 2 | 75 |
| MIMAT0020967 | bcy-miR529 | 1 | __...... | 6 | 75 |
| MIMAT0020963 | bgy-miR529 | 1 | __...... | 6 | 75 |
| MIMAT0019048 | hsa-miR-4511 | 1 | __...... | 6 | 75 |
| MIMAT0018298 | gma-miR4386 | 1 | ......__ | 6 | 75 |
| MIMAT0018902 | tca-miR-3899-5p | 6 | ......__ | 1 | 75 |
| MIMAT0018650 | tca-miR-3811d-5p | 6 | __...... | 1 | 75 |
| MIMAT0018539 | ame-miR-3765 | 1 | __...... | 6 | 75 |
| MIMAT0017848 | rno-miR-3568 | 8 | __...... | 3 | 75 |
| MIMAT0016257 | sja-miR-36-5p | 1 | __...... | 6 | 75 |
| MIMAT0015709 | ssc-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0017622 | aly-miR838-3p | 8 | __...... | 3 | 75 |
| MIMAT0017620 | aly-miR835-3p | 2 | __...... | 7 | 75 |
| MIMAT0015435 | bmo-miR-3252 | 2 | __...... | 7 | 75 |
| MIMAT0015415 | bmo-miR-3233 | 6 | _......_ | 1 | 75 |
| MIMAT0015065 | hsa-miR-3185 | 2 | __...... | 7 | 75 |
| MIMAT0012729 | iltv-miR-I5-3p | 2 | __...... | 7 | 75 |
| MIMAT0012518 | dsi-miR-2581 | 1 | _......_ | 6 | 75 |
| MIMAT0012350 | dps-miR-2545a-5p | 8 | __...... | 3 | 75 |
| MIMAT0012040 | bta-miR-1434-3p | 1 | __...... | 6 | 75 |
| MIMAT0011712 | ppc-miR-2249 | 3 | _......_ | 8 | 75 |
| MIMAT0009410 | mmu-miR-1945 | 6 | _......_ | 1 | 75 |
| MIMAT0007868 | mmu-miR-1903 | 8 | __...... | 3 | 75 |
| MIMAT0007287 | gga-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0006961 | oan-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0005549 | mcmv-miR-m59-2 | 3 | _......_ | 8 | 75 |
| MIMAT0005240 | smo-miR1088-5p | 3 | __...... | 8 | 75 |
| MIMAT0005076 | ppt-miR902f-3p | 2 | _......_ | 7 | 75 |
| MIMAT0005060 | ppt-miR529g | 1 | _......_ | 6 | 75 |
| MIMAT0005056 | ppt-miR529c | 1 | _......_ | 6 | 75 |
| MIMAT0005055 | ppt-miR529b | 1 | _......_ | 6 | 75 |
| MIMAT0005054 | ppt-miR529a | 1 | _......_ | 6 | 75 |
| MIMAT0005495 | dme-miR-979-3p | 6 | __...... | 1 | 75 |
| MIMAT0004260 | ath-miR838 | 8 | __...... | 3 | 75 |
| MIMAT0026651 | mdo-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0003826 | bta-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0003671 | xtr-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0031943 | dre-miR-22b-5p | 8 | __...... | 3 | 75 |
| MIMAT0031942 | dre-miR-22a-5p | 8 | __...... | 3 | 75 |
| MIMAT0003152 | rno-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0004629 | mmu-miR-22-5p | 8 | __...... | 3 | 75 |
| MIMAT0004495 | hsa-miR-22-5p | 8 | __...... | 3 | 75 |
