RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | tcggaaca | 8 | ||
MIMAT0037075 | ssc-miR-9856-3p | 8 | ........ | 1 | 100 |
MIMAT0012868 | hvt-miR-H15-5p | 1 | ........ | 8 | 100 |
MIMAT0016528 | cin-miR-4018a-5p | 1 | _....... | 7 | 87 |
MIMAT0031696 | bbe-miR-4873-5p | 8 | .g...... | 1 | 87 |
MIMAT0020502 | bfl-miR-4906 | 8 | .t...... | 1 | 87 |
MIMAT0020452 | bfl-miR-4873 | 8 | .g...... | 1 | 87 |
MIMAT0037295 | ame-miR-9890 | 2 | ......__ | 7 | 75 |
MIMAT0036482 | tch-miR-9771c | 2 | ......__ | 7 | 75 |
MIMAT0035764 | tae-miR9654b-3p | 6 | ......__ | 1 | 75 |
MIMAT0035531 | bdi-miR2118a | 7 | ......__ | 2 | 75 |
MIMAT0035254 | gsa-miR-1175-5p | 2 | ......__ | 7 | 75 |
MIMAT0034688 | eca-miR-9137 | 8 | __...... | 3 | 75 |
MIMAT0034591 | eca-miR-9047 | 6 | __...... | 1 | 75 |
MIMAT0034468 | eca-miR-8939 | 6 | ......__ | 1 | 75 |
MIMAT0033949 | atr-miR8558b | 7 | ......__ | 2 | 75 |
MIMAT0033945 | atr-miR398 | 8 | __...... | 3 | 75 |
MIMAT0033877 | atr-miR8590 | 7 | ......__ | 2 | 75 |
MIMAT0033837 | atr-miR8562b | 1 | ......__ | 6 | 75 |
MIMAT0033836 | atr-miR8562a | 1 | ......__ | 6 | 75 |
MIMAT0033830 | atr-miR8558a | 7 | ......__ | 2 | 75 |
MIMAT0033659 | sma-miR-8470-5p | 3 | _......_ | 8 | 75 |
MIMAT0033559 | sma-miR-8427-3p | 1 | __...... | 6 | 75 |
MIMAT0033544 | sma-miR-8420-5p | 3 | __...... | 8 | 75 |
MIMAT0030490 | prd-miR-7873a-5p | 7 | _......_ | 2 | 75 |
MIMAT0030309 | bdi-miR7777-3p.1 | 7 | __...... | 2 | 75 |
MIMAT0030271 | bdi-miR7762-3p | 2 | ......__ | 7 | 75 |
MIMAT0028825 | mdo-miR-7384-3p | 3 | __...... | 8 | 75 |
MIMAT0026400 | sbi-miR5568c-5p | 8 | __...... | 3 | 75 |
MIMAT0025787 | gga-miR-6682-3p | 2 | __...... | 7 | 75 |
MIMAT0025540 | bta-miR-6522 | 1 | ......__ | 6 | 75 |
MIMAT0025339 | pde-miR947 | 3 | ......__ | 8 | 75 |
MIMAT0027272 | ppe-miR482a-3p | 7 | ......__ | 2 | 75 |
MIMAT0024823 | hvu-miR6197 | 8 | __...... | 3 | 75 |
MIMAT0024801 | hvu-miR6178 | 3 | _......_ | 8 | 75 |
MIMAT0024590 | bta-miR-6120-5p | 7 | __...... | 2 | 75 |
MIMAT0024566 | cca-miR6118-3p | 6 | ......__ | 1 | 75 |
MIMAT0023453 | hco-miR-5951 | 7 | _......_ | 2 | 75 |
MIMAT0023282 | osa-miR5810 | 2 | _......_ | 7 | 75 |
MIMAT0021318 | mtr-miR5279 | 1 | _......_ | 6 | 75 |
MIMAT0021231 | mtr-miR2592bk | 2 | __...... | 7 | 75 |
MIMAT0021230 | mtr-miR2592bj | 2 | __...... | 7 | 75 |
MIMAT0021229 | mtr-miR2592bi | 2 | __...... | 7 | 75 |
MIMAT0019614 | pma-miR-4581 | 3 | ......__ | 8 | 75 |
MIMAT0019570 | pma-miR-4542-5p | 8 | __...... | 3 | 75 |
MIMAT0018316 | gma-miR4400 | 2 | ......__ | 7 | 75 |
MIMAT0018893 | tca-miR-3895-3p | 1 | _......_ | 6 | 75 |
MIMAT0018625 | tca-miR-3804a-3p | 7 | __...... | 2 | 75 |
MIMAT0018606 | ame-miR-3737 | 3 | ......__ | 8 | 75 |
MIMAT0018567 | ame-miR-3788 | 6 | _......_ | 1 | 75 |
MIMAT0018160 | pab-miR947 | 3 | ......__ | 8 | 75 |
MIMAT0018040 | vvi-miR3634-3p | 7 | ......__ | 2 | 75 |
MIMAT0016888 | hsa-miR-4326 | 6 | __...... | 1 | 75 |
MIMAT0016530 | cin-miR-4018b-5p | 2 | __...... | 7 | 75 |
MIMAT0016484 | cin-miR-4006g-5p | 2 | __...... | 7 | 75 |
MIMAT0016482 | cin-miR-4006f-5p | 2 | __...... | 7 | 75 |
MIMAT0016480 | cin-miR-4006e-5p | 2 | __...... | 7 | 75 |
MIMAT0016478 | cin-miR-4006a-5p | 2 | __...... | 7 | 75 |
MIMAT0016476 | cin-miR-4006d-5p | 2 | __...... | 7 | 75 |
MIMAT0016474 | cin-miR-4006c-5p | 2 | __...... | 7 | 75 |
MIMAT0016472 | cin-miR-4006b-5p | 2 | __...... | 7 | 75 |
MIMAT0016450 | cin-miR-4001c-5p | 1 | _......_ | 6 | 75 |
MIMAT0017727 | aly-miR3446-5p | 2 | ......__ | 7 | 75 |
MIMAT0015425 | bmo-miR-3243 | 2 | __...... | 7 | 75 |
MIMAT0015395 | bmo-miR-3215 | 8 | __...... | 3 | 75 |
MIMAT0005961 | osa-miR1427 | 3 | _......_ | 8 | 75 |
MIMAT0006951 | oan-miR-1355-5p | 6 | __...... | 1 | 75 |
MIMAT0005007 | pta-miR947 | 3 | ......__ | 8 | 75 |
MIMAT0005000 | pta-miR398 | 8 | __...... | 3 | 75 |
MIMAT0004412 | rrv-miR-rR1-5 | 2 | _......_ | 7 | 75 |
MIMAT0004835 | ebv-miR-BART18-3p | 3 | ......__ | 8 | 75 |
MIMAT0026490 | gga-miR-33-3p | 8 | __...... | 3 | 75 |