VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hbv-miR-b3rc-3p
ucggcuc

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcggctc`	7
MIMAT0037191	ata-miR171a-3p	8	`.......`	2	100
MIMAT0035519	bdi-miR171f	8	`.......`	2	100
MIMAT0031467	ppe-miR171d-3p	8	`.......`	2	100
MIMAT0031311	stu-miR479	8	`.......`	2	100
MIMAT0029316	lja-miR171c	8	`.......`	2	100
MIMAT0025946	mdm-miR171i	8	`.......`	2	100
MIMAT0027384	hsa-miR-6741-3p	1	`.......`	7	100
MIMAT0023234	gma-miR171s	8	`.......`	2	100
MIMAT0023229	gma-miR171r	8	`.......`	2	100
MIMAT0023132	mtr-miR171g	8	`.......`	2	100
MIMAT0021366	mtr-miR5295d	1	`.......`	7	100
MIMAT0021365	mtr-miR5295c	1	`.......`	7	100
MIMAT0021364	mtr-miR5295b	1	`.......`	7	100
MIMAT0021363	mtr-miR5295a	1	`.......`	7	100
MIMAT0021269	mtr-miR171h	8	`.......`	2	100
MIMAT0019080	hsa-miR-4537	8	`.......`	2	100
MIMAT0018455	csi-miR171b	8	`.......`	2	100
MIMAT0007442	gga-miR-1581	8	`.......`	2	100
MIMAT0007363	gma-miR171b-3p	8	`.......`	2	100
MIMAT0005996	ptc-miR171j	8	`.......`	2	100
MIMAT0005995	ptc-miR171m	8	`.......`	2	100
MIMAT0005994	ptc-miR171l-3p	8	`.......`	2	100
MIMAT0037296	ame-miR-9891	1	`......_`	6	85
MIMAT0037101	ata-miR171c-3p	8	`_......`	3	85
MIMAT0035482	sly-miR171e	8	`_......`	3	85
MIMAT0035341	gsa-miR-9397-3p	3	`......_`	8	85
MIMAT0034764	eca-miR-9183	2	`_......`	7	85
MIMAT0033925	atr-miR171b	8	`_......`	3	85
MIMAT0033175	ppc-miR-8318-3p	1	`......_`	6	85
MIMAT0033101	ppc-miR-8294-5p	3	`_......`	8	85
MIMAT0032972	ppc-miR-8252a-5p	1	`......_`	6	85
MIMAT0032962	ppc-miR-8249-5p	3	`_......`	8	85
MIMAT0032843	cel-miR-8211-3p	2	`_......`	7	85
MIMAT0031765	hbv-miR-B3RC-3p	1	`_......`	6	85
MIMAT0031302	stu-miR171d-3p	8	`_......`	3	85
MIMAT0031248	stu-miR171b-3p	8	`_......`	3	85
MIMAT0030582	prd-miR-7896-5p	8	`_......`	3	85
MIMAT0029851	mmu-miR-7672-3p	1	`......_`	6	85
MIMAT0029824	mmu-miR-7659-5p	8	`_......`	3	85
MIMAT0029318	lja-miR171d-5p	8	`_......`	3	85
MIMAT0029240	mes-miR171d	8	`_......`	3	85
MIMAT0029239	mes-miR171c	8	`_......`	3	85
MIMAT0029238	mes-miR171b	8	`_......`	3	85
MIMAT0026123	cme-miR171b	8	`_......`	3	85
MIMAT0026122	cme-miR171d	8	`_......`	3	85
MIMAT0026085	cme-miR171i	8	`_......`	3	85
MIMAT0025951	mdm-miR171n	8	`_......`	3	85
MIMAT0025950	mdm-miR171m	8	`_......`	3	85
MIMAT0025949	mdm-miR171l	8	`_......`	3	85
MIMAT0025948	mdm-miR171k	8	`_......`	3	85
MIMAT0025947	mdm-miR171j	8	`_......`	3	85
MIMAT0025943	mdm-miR171f	8	`_......`	3	85
MIMAT0025939	mdm-miR171b	8	`_......`	3	85
MIMAT0025938	mdm-miR171a	8	`_......`	3	85
MIMAT0025233	ptc-miR6432	1	`_......`	6	85
MIMAT0027309	ppe-miR171b	8	`_......`	3	85
MIMAT0027285	ppe-miR171h	8	`_......`	3	85
MIMAT0024687	nta-miR171b	8	`_......`	3	85
MIMAT0027224	lus-miR171i	8	`_......`	3	85
MIMAT0027219	lus-miR171h	8	`_......`	3	85
MIMAT0024132	ggo-miR-760	1	`_......`	6	85
MIMAT0023236	gma-miR171t	8	`_......`	3	85
MIMAT0023215	gma-miR171q	8	`_......`	3	85
MIMAT0023208	gma-miR171p	8	`_......`	3	85
MIMAT0023204	gma-miR171o-3p	8	`_......`	3	85
MIMAT0023202	gma-miR171n	8	`_......`	3	85
MIMAT0023200	gma-miR171m	8	`_......`	3	85
MIMAT0022513	ssl-miR171b	8	`_......`	3	85
MIMAT0022512	ssl-miR171a	8	`_......`	3	85
MIMAT0022995	gma-miR171k-3p	8	`_......`	3	85
MIMAT0022983	gma-miR169i-5p	7	`_......`	2	85
MIMAT0021057	gma-miR171i-3p	8	`_......`	3	85
MIMAT0020199	dme-miR-4972-5p	3	`......_`	8	85
MIMAT0019695	hsa-miR-4638-5p	3	`......_`	8	85
MIMAT0018456	csi-miR171a	8	`_......`	3	85
MIMAT0022972	gma-miR171c-3p	8	`_......`	3	85
MIMAT0018227	tae-miR171b	8	`_......`	3	85
MIMAT0016104	ppy-miR-760	1	`_......`	6	85
MIMAT0017632	aly-miR845a-3p	1	`_......`	6	85
MIMAT0017520	aly-miR171c-3p	8	`_......`	3	85
MIMAT0017518	aly-miR171b-3p	8	`_......`	3	85
MIMAT0015522	bmo-miR-3335	7	`_......`	2	85
MIMAT0014173	rco-miR171b	8	`_......`	3	85
MIMAT0014172	rco-miR171a	8	`_......`	3	85
MIMAT0014082	ctr-miR171	8	`_......`	3	85
MIMAT0012788	mml-miR-760	1	`_......`	6	85
MIMAT0013625	bmo-miR-745-5p	1	`_......`	6	85
MIMAT0015303	bmo-miR-306a-3p	8	`_......`	3	85
MIMAT0013343	mtr-miR2623	1	`......_`	6	85
MIMAT0012416	dps-miR-2573-5p	8	`_......`	3	85
MIMAT0010170	bol-miR171a	8	`_......`	3	85
MIMAT0010164	bra-miR171d	8	`_......`	3	85
MIMAT0010163	bra-miR171c	8	`_......`	3	85
MIMAT0010162	bra-miR171b	8	`_......`	3	85
MIMAT0010161	bra-miR171a	8	`_......`	3	85
MIMAT0022951	bta-miR-760-3p	1	`_......`	6	85
MIMAT0032050	dvi-miR-313-5p	1	`......_`	6	85
MIMAT0008319	ptr-miR-760	1	`_......`	6	85
MIMAT0007925	sly-miR171d	8	`_......`	3	85
MIMAT0007923	sly-miR171b	8	`_......`	3	85
MIMAT0006555	vvi-miR171g	8	`_......`	3	85
MIMAT0007524	gga-miR-1648-5p	1	`_......`	6	85
MIMAT0007358	gma-miR171a	7	`_......`	2	85
MIMAT0031098	oan-miR-103-1-5p	1	`......_`	6	85
MIMAT0007054	oan-miR-1373	6	`......_`	1	85
MIMAT0005696	vvi-miR171f	8	`_......`	3	85
MIMAT0005609	bna-miR171e	8	`_......`	3	85
MIMAT0005608	bna-miR171d	8	`_......`	3	85
MIMAT0005607	bna-miR171c	8	`_......`	3	85
MIMAT0005606	bna-miR171b	8	`_......`	3	85
MIMAT0005605	bna-miR171a	8	`_......`	3	85
MIMAT0005337	rno-miR-760-3p	1	`_......`	6	85
MIMAT0005226	smo-miR171d	7	`_......`	2	85
MIMAT0005224	smo-miR171b	7	`_......`	2	85
MIMAT0005223	smo-miR171a	8	`_......`	3	85
MIMAT0004376	ppt-miR171b	8	`_......`	3	85
MIMAT0004375	ppt-miR171a	7	`_......`	2	85
MIMAT0011113	mtr-miR171f	8	`_......`	3	85
MIMAT0004957	hsa-miR-760	1	`_......`	6	85
MIMAT0004268	ath-miR845a	1	`_......`	6	85
MIMAT0026658	mdo-miR-103-1-5p	1	`......_`	6	85
MIMAT0003898	mmu-miR-760-3p	1	`_......`	6	85
MIMAT0026582	mml-miR-103-5p	1	`......_`	6	85
MIMAT0001984	ptc-miR171b	8	`_......`	3	85
MIMAT0001983	ptc-miR171a-3p	8	`_......`	3	85
MIMAT0001756	sbi-miR171f	8	`_......`	3	85
MIMAT0001746	zma-miR171h-3p	8	`_......`	3	85
MIMAT0001745	zma-miR171k-3p	8	`_......`	3	85
MIMAT0001695	zma-miR171f-3p	8	`_......`	3	85
MIMAT0001466	sbi-miR171e	8	`_......`	3	85
MIMAT0001386	zma-miR171b-3p	8	`_......`	3	85
MIMAT0031070	gga-miR-103-1-5p	1	`......_`	6	85
MIMAT0001077	osa-miR171h	8	`_......`	3	85
MIMAT0000921	ath-miR171c-3p	8	`_......`	3	85
MIMAT0000920	ath-miR171b-3p	8	`_......`	3	85