RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | tctctggc | 8 | ||
MIMAT0034812 | efu-miR-9220 | 1 | ........ | 8 | 100 |
MIMAT0006017 | hiv1-miR-TAR-3p | 1 | ........ | 8 | 100 |
MIMAT0036421 | ggo-miR-518c-5p | 1 | ......._ | 7 | 87 |
MIMAT0036143 | chi-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0034521 | eca-miR-8984 | 1 | _....... | 7 | 87 |
MIMAT0027549 | hsa-miR-6824-3p | 1 | ......._ | 7 | 87 |
MIMAT0027429 | hsa-miR-6764-3p | 1 | ......._ | 7 | 87 |
MIMAT0025778 | gga-miR-6675-3p | 1 | ......._ | 7 | 87 |
MIMAT0020440 | tcc-miR399f | 8 | _....... | 2 | 87 |
MIMAT0019900 | hsa-miR-4756-3p | 7 | ......._ | 1 | 87 |
MIMAT0018701 | tca-miR-3834-3p | 1 | ......._ | 7 | 87 |
MIMAT0015833 | ppy-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0015404 | bmo-miR-3223-3p | 2 | ......._ | 8 | 87 |
MIMAT0022732 | hsa-miR-3191-5p | 2 | ......._ | 8 | 87 |
MIMAT0013012 | eca-miR-330 | 1 | ......._ | 7 | 87 |
MIMAT0009893 | cfa-miR-330 | 1 | ......._ | 7 | 87 |
MIMAT0006270 | mml-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0002847 | hsa-miR-518c-5p | 1 | ......._ | 7 | 87 |
MIMAT0004693 | hsa-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0004642 | mmu-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0004641 | rno-miR-330-5p | 1 | ......._ | 7 | 87 |
MIMAT0028377 | mml-miR-7205-3p | 1 | ......a. | 8 | 87 |
MIMAT0027805 | mmu-miR-6952-3p | 1 | ......a. | 8 | 87 |
MIMAT0019592 | pma-miR-4560 | 1 | ......t. | 8 | 87 |
MIMAT0008403 | hsv1-miR-H5-3p | 8 | ......a. | 1 | 87 |
MIMAT0007523 | gga-miR-1647 | 1 | ......c. | 8 | 87 |
MIMAT0036763 | oha-miR-181b-3p | 3 | _......_ | 8 | 75 |
MIMAT0036601 | tch-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0036412 | ggo-miR-525-5p | 8 | _......_ | 3 | 75 |
MIMAT0036138 | chi-miR-326-3p | 2 | _......_ | 7 | 75 |
MIMAT0035805 | tae-miR9678-3p | 1 | __...... | 6 | 75 |
MIMAT0035726 | rno-miR-149-5p | 1 | __...... | 6 | 75 |
MIMAT0035021 | efu-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0034805 | efu-miR-9214 | 2 | ......__ | 7 | 75 |
MIMAT0034752 | eca-miR-9172 | 2 | _......_ | 7 | 75 |
MIMAT0034689 | eca-miR-9138 | 2 | __...... | 7 | 75 |
MIMAT0034556 | eca-miR-9015 | 8 | _......_ | 3 | 75 |
MIMAT0034512 | eca-miR-8975 | 7 | _......_ | 2 | 75 |
MIMAT0034455 | eca-miR-8927 | 1 | __...... | 6 | 75 |
MIMAT0034342 | cfa-miR-8847 | 8 | _......_ | 3 | 75 |
MIMAT0033810 | pxy-miR-2525-3p | 1 | __...... | 6 | 75 |
MIMAT0031686 | bbe-miR-4864-3p | 7 | __...... | 2 | 75 |
MIMAT0030635 | prd-miR-7909-3p | 7 | _......_ | 2 | 75 |
MIMAT0030592 | prd-miR-240-5p | 7 | _......_ | 2 | 75 |
MIMAT0029907 | mmu-miR-7688-3p | 1 | __...... | 6 | 75 |
MIMAT0029811 | mmu-miR-7652-3p | 1 | __...... | 6 | 75 |
MIMAT0029123 | hcmv-miR-UL69 | 6 | _......_ | 1 | 75 |
MIMAT0028961 | oan-miR-7407-3p | 3 | ......__ | 8 | 75 |
MIMAT0028850 | mdo-miR-7386d-5p | 2 | _......_ | 7 | 75 |
MIMAT0028737 | mdo-miR-7362-3p | 6 | _......_ | 1 | 75 |
MIMAT0028654 | mdo-miR-7326-5p | 7 | ......__ | 2 | 75 |
MIMAT0028562 | mdo-miR-7290-5p | 1 | __...... | 6 | 75 |
MIMAT0028145 | ssc-miR-7135-5p | 1 | ......__ | 6 | 75 |
MIMAT0026362 | bma-miR-5863 | 6 | __...... | 1 | 75 |
MIMAT0027947 | mmu-miR-7021-3p | 1 | ......__ | 6 | 75 |
MIMAT0027535 | hsa-miR-6817-3p | 3 | ......__ | 8 | 75 |
MIMAT0027358 | hsa-miR-6728-3p | 1 | ......__ | 6 | 75 |
MIMAT0025744 | gga-miR-6647-5p | 3 | _......_ | 8 | 75 |
MIMAT0025672 | gga-miR-6582-3p | 3 | _......_ | 8 | 75 |
MIMAT0025464 | hsa-miR-6504-5p | 1 | __...... | 6 | 75 |
MIMAT0025459 | hsa-miR-6501-3p | 6 | _......_ | 1 | 75 |
MIMAT0025229 | ptc-miR6428 | 1 | __...... | 6 | 75 |
MIMAT0025141 | mmu-miR-6392-5p | 1 | __...... | 6 | 75 |
MIMAT0024809 | hvu-miR6185 | 1 | __...... | 6 | 75 |
MIMAT0024570 | bta-miR-149-5p | 1 | __...... | 6 | 75 |
MIMAT0024215 | ggo-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0024144 | ggo-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0023913 | cgr-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0023780 | cgr-miR-149-5p | 1 | __...... | 6 | 75 |
MIMAT0022374 | mmu-miR-5623-3p | 3 | __...... | 8 | 75 |
MIMAT0022148 | osa-miR5514 | 8 | _......_ | 3 | 75 |
MIMAT0022048 | aca-miR-5427 | 3 | __...... | 8 | 75 |
MIMAT0021551 | asu-miR-5349-3p | 1 | __...... | 6 | 75 |
MIMAT0021292 | mtr-miR5268b | 6 | _......_ | 1 | 75 |
MIMAT0021291 | mtr-miR5268a | 6 | _......_ | 1 | 75 |
MIMAT0020186 | dme-miR-4963-3p | 3 | ......__ | 8 | 75 |
MIMAT0020098 | bfl-miR-4864-3p | 8 | __...... | 3 | 75 |
MIMAT0019967 | hsa-miR-4794 | 1 | __...... | 6 | 75 |
MIMAT0019864 | hsa-miR-3064-5p | 1 | __...... | 6 | 75 |
MIMAT0019718 | hsa-miR-4653-5p | 1 | ......__ | 6 | 75 |
MIMAT0019557 | pma-miR-497-3p | 6 | _......_ | 1 | 75 |
MIMAT0018379 | ssc-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0018228 | gma-miR4340 | 8 | ......__ | 3 | 75 |
MIMAT0018197 | hsa-miR-3922-3p | 1 | __...... | 6 | 75 |
MIMAT0018196 | hsa-miR-3921 | 1 | ......__ | 6 | 75 |
MIMAT0018193 | hsa-miR-3919 | 7 | ......__ | 2 | 75 |
MIMAT0016878 | hsa-miR-4257 | 6 | _......_ | 1 | 75 |
MIMAT0016868 | hsa-miR-4314 | 1 | _......_ | 6 | 75 |
MIMAT0017805 | rno-miR-3085 | 1 | __...... | 6 | 75 |
MIMAT0016292 | sja-miR-3486-5p | 1 | ......__ | 6 | 75 |
MIMAT0016036 | ppy-miR-593 | 3 | ......__ | 8 | 75 |
MIMAT0015982 | ppy-miR-525-5p | 8 | _......_ | 3 | 75 |
MIMAT0015969 | ppy-miR-520c-5p | 1 | _......_ | 6 | 75 |
MIMAT0015966 | ppy-miR-520a-5p | 8 | _......_ | 3 | 75 |
MIMAT0015955 | ppy-miR-518d-5p | 1 | _......_ | 6 | 75 |
MIMAT0015830 | ppy-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0015773 | ppy-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0015422 | bmo-miR-3239 | 7 | ......__ | 2 | 75 |
MIMAT0015073 | hsa-miR-3190-5p | 1 | __...... | 6 | 75 |
MIMAT0014991 | hsa-miR-3128 | 1 | __...... | 6 | 75 |
MIMAT0015377 | hsa-miR-3126-3p | 3 | __...... | 8 | 75 |
MIMAT0014985 | hsa-miR-3123 | 6 | ......__ | 1 | 75 |
MIMAT0014879 | mmu-miR-3085-3p | 1 | __...... | 6 | 75 |
MIMAT0014834 | mmu-miR-3064-5p | 1 | __...... | 6 | 75 |
MIMAT0013831 | osa-miR2879 | 6 | __...... | 1 | 75 |
MIMAT0012989 | eca-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0012973 | eca-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0012322 | dps-miR-2533 | 2 | __...... | 7 | 75 |
MIMAT0012052 | bta-miR-2464-3p | 8 | _......_ | 3 | 75 |
MIMAT0012044 | bta-miR-2459 | 6 | __...... | 1 | 75 |
MIMAT0012013 | bta-miR-2439-5p | 1 | __...... | 6 | 75 |
MIMAT0011902 | bta-miR-2364 | 1 | ......__ | 6 | 75 |
MIMAT0011798 | bta-miR-2290 | 3 | _......_ | 8 | 75 |
MIMAT0011456 | cel-miR-2218a-3p | 8 | __...... | 3 | 75 |
MIMAT0011304 | dre-miR-2196 | 3 | ......__ | 8 | 75 |
MIMAT0009894 | cfa-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0009884 | cfa-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0009814 | nve-miR-2045-5p | 8 | _......_ | 3 | 75 |
MIMAT0009286 | bta-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0008264 | ptr-miR-593 | 3 | ......__ | 8 | 75 |
MIMAT0008099 | ptr-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0008043 | ptr-miR-149 | 1 | __...... | 6 | 75 |
MIMAT0007873 | mmu-miR-1896 | 2 | ......__ | 7 | 75 |
MIMAT0006542 | mml-miR-942-5p | 3 | ......__ | 8 | 75 |
MIMAT0006453 | mml-miR-593 | 3 | ......__ | 8 | 75 |
MIMAT0006402 | mml-miR-525 | 8 | _......_ | 3 | 75 |
MIMAT0026896 | mml-miR-520a-5p | 7 | _......_ | 2 | 75 |
MIMAT0006210 | mml-miR-149-5p | 1 | __...... | 6 | 75 |
MIMAT0007712 | gga-miR-1756b | 2 | ......__ | 7 | 75 |
MIMAT0007708 | gga-miR-1794 | 6 | __...... | 1 | 75 |
MIMAT0007591 | gga-miR-1699 | 6 | _......_ | 1 | 75 |
MIMAT0007581 | gga-miR-1690-5p | 7 | _......_ | 2 | 75 |
MIMAT0007579 | gga-miR-1689-5p | 1 | ......__ | 6 | 75 |
MIMAT0006016 | hiv1-miR-TAR-5p | 3 | ......__ | 8 | 75 |
MIMAT0006927 | oan-miR-1420d-5p | 2 | __...... | 7 | 75 |
MIMAT0026748 | mml-miR-514a-5p | 3 | _......_ | 8 | 75 |
MIMAT0004845 | mmu-miR-881-5p | 6 | ......__ | 1 | 75 |
MIMAT0004303 | ath-miR859 | 3 | ......__ | 8 | 75 |
MIMAT0004802 | hsa-miR-593-3p | 3 | ......__ | 8 | 75 |
MIMAT0022702 | hsa-miR-514a-5p | 3 | _......_ | 8 | 75 |
MIMAT0002838 | hsa-miR-525-5p | 8 | _......_ | 3 | 75 |
MIMAT0002833 | hsa-miR-520a-5p | 8 | _......_ | 3 | 75 |
MIMAT0002140 | ssc-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0000756 | hsa-miR-326 | 2 | _......_ | 7 | 75 |
MIMAT0000560 | rno-miR-326-3p | 2 | _......_ | 7 | 75 |
MIMAT0000559 | mmu-miR-326-3p | 2 | _......_ | 7 | 75 |
MIMAT0000450 | hsa-miR-149-5p | 1 | __...... | 6 | 75 |
MIMAT0000159 | mmu-miR-149-5p | 1 | __...... | 6 | 75 |