VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>wssv-miR154-3p
ucuucau

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcttcat`	7
MIMAT0033284	ppc-miR-8364t-5p	1	`.......`	7	100
MIMAT0033270	ppc-miR-8364s-5p	1	`.......`	7	100
MIMAT0033262	ppc-miR-8364r-5p	1	`.......`	7	100
MIMAT0033260	ppc-miR-8364e-5p	1	`.......`	7	100
MIMAT0033216	ppc-miR-8364i-5p	1	`.......`	7	100
MIMAT0033188	ppc-miR-8364m-5p	1	`.......`	7	100
MIMAT0033176	ppc-miR-8364a-5p	1	`.......`	7	100
MIMAT0033161	ppc-miR-8364w-5p	1	`.......`	7	100
MIMAT0033119	ppc-miR-8364g-5p	1	`.......`	7	100
MIMAT0033109	ppc-miR-8364f-5p	1	`.......`	7	100
MIMAT0033081	ppc-miR-8364b-5p	1	`.......`	7	100
MIMAT0033045	ppc-miR-8364n-5p	1	`.......`	7	100
MIMAT0033030	ppc-miR-8364c-5p	1	`.......`	7	100
MIMAT0033026	ppc-miR-8364j-5p	1	`.......`	7	100
MIMAT0028327	mml-miR-7186-3p	1	`.......`	7	100
MIMAT0027930	mmu-miR-7013-5p	8	`.......`	2	100
MIMAT0021359	mtr-miR5293	8	`.......`	2	100
MIMAT0036975	bta-miR-3533	6	`_......`	1	85
MIMAT0036817	oha-miR-205b-5p	2	`_......`	7	85
MIMAT0036815	oha-miR-205a-5p	3	`_......`	8	85
MIMAT0035156	efu-miR-205	3	`_......`	8	85
MIMAT0034810	efu-miR-9218	8	`......_`	3	85
MIMAT0034438	eca-miR-8910	6	`......_`	1	85
MIMAT0033893	atr-miR8604	7	`_......`	2	85
MIMAT0033236	ppc-miR-8345-5p	1	`......_`	6	85
MIMAT0033209	ppc-miR-8332-3p	6	`......_`	1	85
MIMAT0033063	ppc-miR-8364h-5p	2	`_......`	7	85
MIMAT0032910	ppc-miR-8364d-5p	3	`_......`	8	85
MIMAT0032495	ssa-miR-205b-5p	3	`_......`	8	85
MIMAT0032492	ssa-miR-205a-5p	3	`_......`	8	85
MIMAT0031768	hbv-miR-B8-3p	3	`......_`	8	85
MIMAT0031378	osa-miR6249b	8	`......_`	3	85
MIMAT0030987	hsa-miR-8060	8	`_......`	3	85
MIMAT0031185	stu-miR7984c-3p	2	`_......`	7	85
MIMAT0030412	hsa-miR-7843-3p	6	`_......`	1	85
MIMAT0030255	bdi-miR7723b-3p	6	`_......`	1	85
MIMAT0029460	ipu-miR-205	3	`_......`	8	85
MIMAT0028567	mdo-miR-7291-3p	1	`......_`	6	85
MIMAT0026263	ccr-miR-205	3	`_......`	8	85
MIMAT0026068	mdm-miR169f	6	`......_`	1	85
MIMAT0026067	mdm-miR169e	6	`......_`	1	85
MIMAT0028129	mmu-miR-7116-5p	6	`......_`	1	85
MIMAT0028094	mmu-miR-7094-1-5p	8	`......_`	3	85
MIMAT0027409	hsa-miR-6754-3p	1	`......_`	6	85
MIMAT0025808	gga-miR-6699-5p	6	`......_`	1	85
MIMAT0025487	hsa-miR-6515-3p	3	`......_`	8	85
MIMAT0024925	gma-miR395m	6	`_......`	1	85
MIMAT0024924	gma-miR395l	6	`_......`	1	85
MIMAT0024923	gma-miR395k	6	`_......`	1	85
MIMAT0024922	gma-miR395j	6	`_......`	1	85
MIMAT0024921	gma-miR395i	6	`_......`	1	85
MIMAT0024920	gma-miR395h	6	`_......`	1	85
MIMAT0024871	osa-miR6249a	8	`......_`	3	85
MIMAT0024830	hvu-miR6202	6	`......_`	1	85
MIMAT0023845	cgr-miR-205	3	`_......`	8	85
MIMAT0023525	ath-miR5999	1	`......_`	6	85
MIMAT0023476	hco-miR-5969	3	`_......`	8	85
MIMAT0022812	sha-miR-205	3	`_......`	8	85
MIMAT0022432	ath-miR5659	8	`_......`	3	85
MIMAT0021856	aca-miR-205b	3	`_......`	8	85
MIMAT0021855	aca-miR-205a	3	`_......`	8	85
MIMAT0021617	gma-miR5376	6	`......_`	1	85
MIMAT0021186	mtr-miR5227	6	`......_`	1	85
MIMAT0019519	pma-miR-205b	3	`_......`	8	85
MIMAT0019517	pma-miR-205a-5p	3	`_......`	8	85
MIMAT0018203	hsa-miR-676-5p	1	`......_`	6	85
MIMAT0017995	hsa-miR-3616-5p	6	`_......`	1	85
MIMAT0016647	cin-miR-4079-5p	3	`_......`	8	85
MIMAT0017809	rno-miR-3551-5p	1	`......_`	6	85
MIMAT0016384	gga-miR-3533	6	`_......`	1	85
MIMAT0016323	ahy-miR160-3p	8	`_......`	3	85
MIMAT0015798	ppy-miR-205	3	`_......`	8	85
MIMAT0017680	aly-miR163-3p.1	6	`......_`	1	85
MIMAT0017620	aly-miR835-3p	6	`......_`	1	85
MIMAT0015563	bmo-miR-3374-5p	6	`......_`	1	85
MIMAT0015435	bmo-miR-3252	6	`......_`	1	85
MIMAT0014616	tgu-miR-205	3	`_......`	8	85
MIMAT0012962	eca-miR-205	3	`_......`	8	85
MIMAT0012749	mdo-miR-205a	3	`_......`	8	85
MIMAT0012729	iltv-miR-I5-3p	6	`......_`	1	85
MIMAT0013761	bmo-miR-2842	6	`......_`	1	85
MIMAT0011421	sme-miR-2200-5p	6	`......_`	1	85
MIMAT0009845	cfa-miR-205	3	`_......`	8	85
MIMAT0011142	xla-miR-205	3	`_......`	8	85
MIMAT0006236	mml-miR-205	3	`_......`	8	85
MIMAT0007187	oan-miR-1392-5p	3	`_......`	8	85
MIMAT0006866	oan-miR-205-5p	3	`_......`	8	85
MIMAT0005072	ppt-miR902d-3p	6	`_......`	1	85
MIMAT0004476	mdv2-miR-M29-5p	1	`......_`	6	85
MIMAT0004057	osa-miR814c	3	`_......`	8	85
MIMAT0004056	osa-miR814b	3	`_......`	8	85
MIMAT0004055	osa-miR814a	3	`_......`	8	85
MIMAT0004012	sme-miR-281-5p	6	`......_`	1	85
MIMAT0012117	sme-miR-747-3p	1	`_......`	6	85
MIMAT0003872	osa-miR395o	6	`_......`	1	85
MIMAT0003868	mtr-miR395o	6	`_......`	1	85
MIMAT0003867	mtr-miR395n	6	`_......`	1	85
MIMAT0003866	mtr-miR395m	6	`_......`	1	85
MIMAT0003865	mtr-miR395l	6	`_......`	1	85
MIMAT0003863	mtr-miR395j	6	`_......`	1	85
MIMAT0003862	mtr-miR395i	6	`_......`	1	85
MIMAT0003861	mtr-miR395h	6	`_......`	1	85
MIMAT0003859	mtr-miR395f	6	`_......`	1	85
MIMAT0003858	mtr-miR395e	6	`_......`	1	85
MIMAT0003857	mtr-miR395d	6	`_......`	1	85
MIMAT0003856	mtr-miR395c	6	`_......`	1	85
MIMAT0003720	ebv-miR-BART20-3p	7	`_......`	2	85
MIMAT0003697	xtr-miR-205a	3	`_......`	8	85
MIMAT0003622	xtr-miR-205b	3	`_......`	8	85
MIMAT0003545	bta-miR-205	3	`_......`	8	85
MIMAT0002966	tni-miR-205	3	`_......`	8	85
MIMAT0002965	fru-miR-205	3	`_......`	8	85
MIMAT0002546	mne-miR-205	3	`_......`	8	85
MIMAT0002545	lla-miR-205	3	`_......`	8	85
MIMAT0002544	ptr-miR-205	3	`_......`	8	85
MIMAT0002543	ppa-miR-205	3	`_......`	8	85
MIMAT0002542	age-miR-205	3	`_......`	8	85
MIMAT0002541	ggo-miR-205	3	`_......`	8	85
MIMAT0002146	ssc-miR-205	3	`_......`	8	85
MIMAT0001757	sbi-miR395f	6	`_......`	1	85
MIMAT0001649	mtr-miR395b	6	`_......`	1	85
MIMAT0001648	mtr-miR395a	6	`_......`	1	85
MIMAT0001280	dre-miR-205-5p	3	`_......`	8	85
MIMAT0001184	gga-miR-205a	3	`_......`	8	85
MIMAT0001164	gga-miR-205b	3	`_......`	8	85
MIMAT0000878	rno-miR-205	3	`_......`	8	85
MIMAT0000266	hsa-miR-205-5p	3	`_......`	8	85
MIMAT0000238	mmu-miR-205-5p	3	`_......`	8	85