Result for your query miRNA sequence
>rlcv-miR-rl1-21-5p
ugauugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tgattgt7
MIMAT0036841oha-miR-219-5p1.......7100
MIMAT0036551tch-miR-219-5p1.......7100
MIMAT0036067chi-miR-2191.......7100
MIMAT0035264gsa-miR-219-5p1.......7100
MIMAT0035056efu-miR-2191.......7100
MIMAT0033504sma-miR-219-5p1.......7100
MIMAT0033152ppc-miR-8311-5p1.......7100
MIMAT0032530ssa-miR-219c-5p1.......7100
MIMAT0032528ssa-miR-219b-5p1.......7100
MIMAT0032526ssa-miR-219a-5p1.......7100
MIMAT0031650bbe-miR-219-5p1.......7100
MIMAT0032215lva-miR-219-5p1.......7100
MIMAT0032168pmi-miR-219-5p1.......7100
MIMAT0027433hsa-miR-6766-3p1.......7100
MIMAT0025446pol-miR-219-5p1.......7100
MIMAT0022768sko-miR-2191.......7100
MIMAT0021884aca-miR-219-5p1.......7100
MIMAT0020271emu-miR-2191.......7100
MIMAT0020246egr-miR-2191.......7100
MIMAT0020122xbo-miR-2191.......7100
MIMAT0019945hsa-miR-4782-3p1.......7100
MIMAT0018426nlo-miR-2191.......7100
MIMAT0018391ngi-miR-2191.......7100
MIMAT0016267sja-miR-219-5p1.......7100
MIMAT0015932ppy-miR-508-3p1.......7100
MIMAT0015804ppy-miR-219-5p1.......7100
MIMAT0015690nvi-miR-2191.......7100
MIMAT0014717api-miR-2191.......7100
MIMAT0014568tgu-miR-219a1.......7100
MIMAT0014307aae-miR-2191.......7100
MIMAT0019188rlcv-miR-rL1-21-5p2.......8100
MIMAT0013232eca-miR-508-3p1.......7100
MIMAT0013099eca-miR-219-5p1.......7100
MIMAT0012690isc-miR-2191.......7100
MIMAT0012645dpu-miR-2191.......7100
MIMAT0011311dre-miR-21891.......7100
MIMAT0010012bfl-miR-2191.......7100
MIMAT0009685spu-miR-219-5p1.......7100
MIMAT0009556cte-miR-2191.......7100
MIMAT0009269bta-miR-219-5p1.......7100
MIMAT0009107dya-miR-2191.......7100
MIMAT0009012dwi-miR-2191.......7100
MIMAT0008978dvi-miR-219-5p1.......7100
MIMAT0008868dsi-miR-2191.......7100
MIMAT0008824dse-miR-2191.......7100
MIMAT0008719dpe-miR-2191.......7100
MIMAT0008638dmo-miR-2191.......7100
MIMAT0008561dgr-miR-2191.......7100
MIMAT0008552der-miR-2191.......7100
MIMAT0008474dan-miR-2191.......7100
MIMAT0008377tca-miR-219-5p1.......7100
MIMAT0009193ptr-miR-219-5p1.......7100
MIMAT0006611cfa-miR-219-5p1.......7100
MIMAT0006245mml-miR-219-5p1.......7100
MIMAT0006137csa-miR-2191.......7100
MIMAT0006113cin-miR-219-5p1.......7100
MIMAT0006084odi-miR-2191.......7100
MIMAT0006899oan-miR-219-5p1.......7100
MIMAT0005781pbi-miR-5081.......7100
MIMAT0005772ptr-miR-5081.......7100
MIMAT0005764mml-miR-508-3p1.......7100
MIMAT0005754ssy-miR-5081.......7100
MIMAT0004134mdo-miR-219-5p1.......7100
MIMAT0004006sme-miR-219-5p1.......7100
MIMAT0003632xtr-miR-2191.......7100
MIMAT0002901tni-miR-2191.......7100
MIMAT0002900fru-miR-2191.......7100
MIMAT0002880hsa-miR-508-3p1.......7100
MIMAT0002577ppy-miR-2191.......7100
MIMAT0002576ggo-miR-2191.......7100
MIMAT0002575mml-miR-2191.......7100
MIMAT0001506aga-miR-2191.......7100
MIMAT0001478ame-miR-2191.......7100
MIMAT0001286dre-miR-219-5p1.......7100
MIMAT0001234dps-miR-2191.......7100
MIMAT0001170gga-miR-219a1.......7100
MIMAT0000889rno-miR-219a-5p1.......7100
MIMAT0000664mmu-miR-219a-5p1.......7100
MIMAT0000335dme-miR-219-5p1.......7100
MIMAT0000276hsa-miR-219a-5p1.......7100
MIMAT0037305vvi-miR171j1......_685
MIMAT0037251ata-miR171b-3p1......_685
MIMAT0037229ata-miR171d-3p1......_685
MIMAT0036910oha-miR-34c-3p6......_185
MIMAT0036908oha-miR-34a-3p6......_185
MIMAT0035625dvi-miR-9542a-3p3......_885
MIMAT0035518bdi-miR171e1......_685
MIMAT0035390nve-miR-94303_......885
MIMAT0034961efu-miR-92983......_885
MIMAT0034891efu-miR-34b6......_185
MIMAT0034432cfa-miR-507a3......_885
MIMAT0034144gra-miR8771b2_......785
MIMAT0034143gra-miR8771a2_......785
MIMAT0033926atr-miR171c1......_685
MIMAT0033924atr-miR171a1......_685
MIMAT0033599sma-miR-7-3p8_......385
MIMAT0033537sma-miR-8416-3p1......_685
MIMAT0033268ppc-miR-8354-5p3......_885
MIMAT0033074ppc-miR-8304b-3p1_......685
MIMAT0032717ssa-miR-96-3p6......_185
MIMAT0031857lus-miR171j1......_685
MIMAT0031809cpa-miR171d1......_685
MIMAT0031808cpa-miR171c1......_685
MIMAT0031807cpa-miR171b1......_685
MIMAT0031806cpa-miR171a1......_685
MIMAT0031345stu-miR171e1......_685
MIMAT0031259stu-miR171c-3p1......_685
MIMAT0031257stu-miR171a-3p1......_685
MIMAT0030372ptc-miR78143_......885
MIMAT0030145bdi-miR7711-3p.12_......785
MIMAT0029315lja-miR171b1......_685
MIMAT0029314lja-miR171a1......_685
MIMAT0029247mes-miR171k1......_685
MIMAT0029246mes-miR171j1......_685
MIMAT0029245mes-miR171i1......_685
MIMAT0029244mes-miR171h1......_685
MIMAT0029243mes-miR171g1......_685
MIMAT0029007oan-miR-7428-3p3......_885
MIMAT0026173cme-miR171h1......_685
MIMAT0026166cme-miR171f1......_685
MIMAT0026154cme-miR171c1......_685
MIMAT0026120cme-miR171g1......_685
MIMAT0026119cme-miR171a1......_685
MIMAT0026118cme-miR171e1......_685
MIMAT0025945mdm-miR171h1......_685
MIMAT0025944mdm-miR171g1......_685
MIMAT0025942mdm-miR171e1......_685
MIMAT0025941mdm-miR171d1......_685
MIMAT0025940mdm-miR171c1......_685
MIMAT0028039mmu-miR-7067-3p1......_685
MIMAT0025508htu-miR171c1......_685
MIMAT0025507htu-miR171b1......_685
MIMAT0025506htu-miR171a1......_685
MIMAT0025505hpa-miR171a1......_685
MIMAT0025330pde-miR1711......_685
MIMAT0025192ptc-miR64641......_685
MIMAT0027323ppe-miR171c1......_685
MIMAT0027304ppe-miR171g1......_685
MIMAT0027286ppe-miR171a1......_685
MIMAT0027274ppe-miR171f1......_685
MIMAT0024850rno-miR-509-3p1......_685
MIMAT0024688nta-miR171c1......_685
MIMAT0027193lus-miR171g1......_685
MIMAT0027149lus-miR171e1......_685
MIMAT0027140lus-miR171c1......_685
MIMAT0027134lus-miR171b1......_685
MIMAT0024520cca-miR1711......_685
MIMAT0023362hco-miR-5908-5p3......_885
MIMAT0023320hco-miR-5886a8_......385
MIMAT0023240gma-miR171u1......_685
MIMAT0022523ssl-miR10783......_885
MIMAT0022990gma-miR171j-3p1......_685
MIMAT0020665bdi-miR171d-3p1......_685
MIMAT0020659bdi-miR171b1......_685
MIMAT0020991gma-miR171g1......_685
MIMAT0020990gma-miR171f1......_685
MIMAT0020989gma-miR171e1......_685
MIMAT0020988gma-miR171d1......_685
MIMAT0020412tcc-miR171h1......_685
MIMAT0020411tcc-miR171g1......_685
MIMAT0020410tcc-miR171f1......_685
MIMAT0020409tcc-miR171e1......_685
MIMAT0020408tcc-miR171d1......_685
MIMAT0020405tcc-miR171a1......_685
MIMAT0019649pma-miR-46151_......685
MIMAT0018963hsa-miR-4445-5p2_......785
MIMAT0018364far-miR1711......_685
MIMAT0018261gma-miR4380a3_......885
MIMAT0018245gma-miR1520g6......_185
MIMAT0018244gma-miR1520f-3p6......_185
MIMAT0018220hvu-miR171-3p1......_685
MIMAT0018709tca-miR-3837-3p3_......885
MIMAT0016597cin-miR-4054-5p3......_885
MIMAT0015934ppy-miR-509-3p1......_685
MIMAT0015741ppy-miR-34b6......_185
MIMAT0017763esi-miR3469-5p7_......285
MIMAT0017516aly-miR171a-3p1......_685
MIMAT0017514aly-miR170-3p1......_685
MIMAT0015598bmo-miR-33947_......285
MIMAT0015461bmo-miR-32763......_885
MIMAT0014880mmu-miR-3086-5p3_......885
MIMAT0014177rco-miR171f1......_685
MIMAT0014176rco-miR171e1......_685
MIMAT0014175rco-miR171d1......_685
MIMAT0014174rco-miR171c1......_685
MIMAT0014087crt-miR1711......_685
MIMAT0014075ccl-miR1711......_685
MIMAT0013997zma-miR171n-3p1......_685
MIMAT0015321zma-miR166n-5p2_......785
MIMAT0012569aqc-miR171d1......_685
MIMAT0012567aqc-miR171b1......_685
MIMAT0012566aqc-miR171a1......_685
MIMAT0013423mtr-miR26513......_885
MIMAT0012186bdi-miR171c-3p1......_685
MIMAT0012174bdi-miR171a1......_685
MIMAT0011908bta-miR-1814b2_......785
MIMAT0011897bta-miR-23591_......685
MIMAT0011344sbi-miR171k1......_685
MIMAT0011343sbi-miR171j1......_685
MIMAT0011342sbi-miR171i1......_685
MIMAT0011340sbi-miR171g1......_685
MIMAT0010165bra-miR171e1......_685
MIMAT0010019ppt-miR20856_......185
MIMAT0009877cfa-miR-5141......_685
MIMAT0009797nve-miR-2037-3p3......_885
MIMAT0008113ptr-miR-34b6......_185
MIMAT0007922sly-miR171a1......_685
MIMAT0006174mml-miR-34b6......_185
MIMAT0015264cin-miR-219-3p3_......885
MIMAT0015251cin-miR-7-3p8_......385
MIMAT0006804oan-miR-96-3p6......_185
MIMAT0005782pbi-miR-5091......_685
MIMAT0005774ptr-miR-509b1......_685
MIMAT0005773ptr-miR-509a1......_685
MIMAT0026747mml-miR-510-3p1......_685
MIMAT0005765mml-miR-5091......_685
MIMAT0005756ssy-miR-509b1......_685
MIMAT0005755ssy-miR-509a1......_685
MIMAT0005744age-miR-509b1......_685
MIMAT0005743age-miR-509a1......_685
MIMAT0005742age-miR-5082_......785
MIMAT0005698vvi-miR171i1......_685
MIMAT0005695vvi-miR171e1......_685
MIMAT0005694vvi-miR171d1......_685
MIMAT0005693vvi-miR171c1......_685
MIMAT0005692vvi-miR171b1......_685
MIMAT0005691vvi-miR171a1......_685
MIMAT0005610bna-miR171f1......_685
MIMAT0005401cre-miR1153-3p.11_......685
MIMAT0005348tae-miR171a1......_685
MIMAT0004996pta-miR1711......_685
MIMAT0004446bna-miR171g1......_685
MIMAT0011105mtr-miR171d1......_685
MIMAT0011083mtr-miR171c1......_685
MIMAT0011066mtr-miR171b1......_685
MIMAT0004891mmu-miR-509-3p1......_685
MIMAT0004329ath-miR779.21......_685
MIMAT0002881hsa-miR-509-3p1......_685
MIMAT0001991ptc-miR171i1......_685
MIMAT0001990ptc-miR171h-3p1......_685
MIMAT0001989ptc-miR171g-3p1......_685
MIMAT0001988ptc-miR171f1......_685
MIMAT0001987ptc-miR171e1......_685
MIMAT0001740zma-miR171i-3p1......_685
MIMAT0001739zma-miR171e-3p1......_685
MIMAT0001738zma-miR171j-3p1......_685
MIMAT0015184zma-miR166k-5p2_......785
MIMAT0001694zma-miR171d-3p1......_685
MIMAT0001655mtr-miR171a1......_685
MIMAT0001584hcmv-miR-US33-5p1_......685
MIMAT0001462sbi-miR171a1......_685
MIMAT0001461sbi-miR171d1......_685
MIMAT0001460sbi-miR171b1......_685
MIMAT0001385zma-miR171a-3p1......_685
MIMAT0026535gga-miR-34a-3p6......_185
MIMAT0001067osa-miR171f-3p1......_685
MIMAT0001066osa-miR171e-3p1......_685
MIMAT0001065osa-miR171d-3p1......_685
MIMAT0001064osa-miR171c-3p1......_685
MIMAT0001063osa-miR171b1......_685
MIMAT0022871osa-miR166l-5p2_......785
MIMAT0017110rno-miR-96-3p6......_185
MIMAT0004676hsa-miR-34b-3p6......_185
MIMAT0000645osa-miR171a1......_685
MIMAT0017021mmu-miR-96-3p6......_185
MIMAT0004557hsa-miR-34a-3p6......_185
MIMAT0000202ath-miR171a-3p1......_685
MIMAT0000201ath-miR170-3p1......_685