Result for your query miRNA sequence
>tumv-miR-s1
ugcaccau

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tgcaccat8
MIMAT0036293chi-miR-7671........8100
MIMAT0024212ggo-miR-7671........8100
MIMAT0024032ptr-miR-7671........8100
MIMAT0016107ppy-miR-767-5p1........8100
MIMAT0013245eca-miR-767-5p1........8100
MIMAT0012773mmu-miR-7671........8100
MIMAT0009375bta-miR-7671........8100
MIMAT0006510mml-miR-767-5p1........8100
MIMAT0003882hsa-miR-767-5p1........8100
MIMAT0033583sma-miR-8439-3p8......._287
MIMAT0032957ppc-miR-8246-3p8_.......287
MIMAT0022570ola-miR-29a2_.......887
MIMAT0010069osa-miR2102-3p8_.......287
MIMAT0009472bfl-miR-29b-3p2_.......887
MIMAT0005419cre-miR11647......._187
MIMAT0026591mml-miR-224-3p7_.......187
MIMAT0016391gga-miR-35408.c......187
MIMAT0009961bta-miR-18351......c.887
MIMAT0006596cfa-miR-18351......c.887
MIMAT0037070ssc-miR-9851-3p3_......_875
MIMAT0036879oha-miR-29b-3p3_......_875
MIMAT0036877oha-miR-29a-3p3_......_875
MIMAT0036723oha-miR-143-5p7......__275
MIMAT0036546tch-miR-29c-3p3_......_875
MIMAT0036511tch-miR-29a-3p3_......_875
MIMAT0036494tch-miR-29b-3p3_......_875
MIMAT0036265chi-miR-502a2......__775
MIMAT0036264chi-miR-500-3p2......__775
MIMAT0036117chi-miR-29c-3p3_......_875
MIMAT0036115chi-miR-29b-3p3_......_875
MIMAT0036113chi-miR-29a-3p3_......_875
MIMAT0035963chi-miR-143-5p6......__175
MIMAT0035613dvi-miR-998-3p3_......_875
MIMAT0035609dvi-miR-995-3p3_......_875
MIMAT0035351gsa-miR-9401-3p7__......275
MIMAT0035229dme-miR-9383-5p7......__275
MIMAT0035155efu-miR-5023......__875
MIMAT0035152efu-miR-5003......__875
MIMAT0035066efu-miR-93278......__375
MIMAT0034986efu-miR-93123__......875
MIMAT0034952efu-miR-92922_......_775
MIMAT0034945efu-miR-92881__......675
MIMAT0034930efu-miR-92826_......_175
MIMAT0034824efu-miR-9223i1......__675
MIMAT0034780efu-miR-9198b8_......_375
MIMAT0034716eca-miR-91433......__875
MIMAT0034679eca-miR-91287_......_275
MIMAT0034660eca-miR-91118......__375
MIMAT0034087gra-miR530b7......__275
MIMAT0034086gra-miR530a7......__275
MIMAT0033868atr-miR85831_......_675
MIMAT0033813pxy-miR-85456......__175
MIMAT0033170ppc-miR-8316-3p6__......175
MIMAT0033145ppc-miR-8356b-3p1__......675
MIMAT0032887ppc-miR-83-3p3_......_875
MIMAT0032591ssa-miR-29c-3p3_......_875
MIMAT0032586ssa-miR-29b-3p3_......_875
MIMAT0032584ssa-miR-29a-3p3_......_875
MIMAT0032365ssa-miR-143-5p6......__175
MIMAT0031751bma-miR-493_......_875
MIMAT0031665bbe-miR-29b-3p3_......_875
MIMAT0031663bbe-miR-29a-3p3_......_875
MIMAT0031620bbe-miR-2060b-3p1_......_675
MIMAT0031619bbe-miR-2060a-3p1_......_675
MIMAT0031532ppe-miR8124-3p3_......_875
MIMAT0030741prd-miR-49-3p3_......_875
MIMAT0030697prd-miR-7883c-3p7......__275
MIMAT0030563prd-miR-7911c-3p7__......275
MIMAT0030529prd-miR-7883b-3p7......__275
MIMAT0030442bta-miR-78626_......_175
MIMAT0030243bdi-miR7751-3p8_......_375
MIMAT0030054oar-miR-29b3_......_875
MIMAT0032196lva-miR-29b-3p3_......_875
MIMAT0032195lva-miR-29a-3p3_......_875
MIMAT0032146pmi-miR-29b-3p3_......_875
MIMAT0032145pmi-miR-29a-3p3_......_875
MIMAT0029843mmu-miR-7668-3p7......__275
MIMAT0029746cbn-miR-833_......_875
MIMAT0029745cbn-miR-493_......_875
MIMAT0031149aja-miR-29c3_......_875
MIMAT0031135aja-miR-29b3_......_875
MIMAT0029145ghr-miR74986__......175
MIMAT0029120gga-miR-7483-5p8__......375
MIMAT0028754mdo-miR-1544d-5p1......__675
MIMAT0028746mdo-miR-1544c-5p1......__675
MIMAT0028217hsa-miR-7153-3p1__......675
MIMAT0026287ccr-miR-29b3_......_875
MIMAT0026286ccr-miR-29a3_......_875
MIMAT0027819mmu-miR-6959-3p2......__775
MIMAT0027804mmu-miR-6952-5p6__......175
MIMAT0027753mmu-miR-6926-3p2__......775
MIMAT0025864blv-miR-B4-3p3_......_875
MIMAT0025758gga-miR-6657-3p8__......375
MIMAT0025609gga-miR-6551-5p7......__275
MIMAT0025001hme-miR-9983_......_875
MIMAT0024970hme-miR-2853_......_875
MIMAT0024559cca-miR6108f7__......275
MIMAT0024436mse-miR-2853_......_875
MIMAT0024423mse-miR-9983_......_875
MIMAT0024308ggo-miR-502b2......__775
MIMAT0024305ggo-miR-675b6_......_175
MIMAT0024187ggo-miR-502a3......__875
MIMAT0024084ggo-miR-29c3_......_875
MIMAT0023976cgr-miR-501-3p3......__875
MIMAT0023974cgr-miR-5003......__875
MIMAT0023888cgr-miR-29c-3p3_......_875
MIMAT0023886cgr-miR-29b-3p3_......_875
MIMAT0023884cgr-miR-29a-3p3_......_875
MIMAT0023665ame-miR-60436__......175
MIMAT0023425hco-miR-59338__......375
MIMAT0023355hco-miR-833_......_875
MIMAT0022656ola-miR-29c3_......_875
MIMAT0022569ola-miR-29b3_......_875
MIMAT0022328cin-miR-5596b-3p6__......175
MIMAT0021914aca-miR-29b3_......_875
MIMAT0021912aca-miR-29a-3p3_......_875
MIMAT0021769aca-miR-143-5p6......__175
MIMAT0021476asu-miR-83-3p3_......_875
MIMAT0021460asu-miR-49-3p3_......_875
MIMAT0021104osa-miR51542_......_775
MIMAT0020135cel-miR-49293......__875
MIMAT0020067spu-miR-29b3_......_875
MIMAT0019472pma-miR-143-5p6......__175
MIMAT0019421pma-miR-29d-3p3_......_875
MIMAT0019419pma-miR-29c3_......_875
MIMAT0019418pma-miR-29b3_......_875
MIMAT0019417pma-miR-29a-3p3_......_875
MIMAT0018401ngi-miR-29b3_......_875
MIMAT0018853tca-miR-998-3p3_......_875
MIMAT0018803tca-miR-29-3p3_......_875
MIMAT0018629tca-miR-995-3p3_......_875
MIMAT0018524ame-miR-37548__......375
MIMAT0018008vvi-miR3623-3p6_......_175
MIMAT0016526cin-miR-4019-5p7......__275
MIMAT0016976cin-miR-4014-2-5p1_......_675
MIMAT0016402cin-miR-29-3p3_......_875
MIMAT0016394cin-miR-3575-5p3__......875
MIMAT0017893rno-miR-35913__......875
MIMAT0016379gga-miR-3530-3p8__......375
MIMAT0016098ppy-miR-675a6_......_175
MIMAT0015925ppy-miR-502-3p3......__875
MIMAT0015923ppy-miR-501-3p3......__875
MIMAT0015735ppy-miR-29c3_......_875
MIMAT0015656nvi-miR-29b3_......_875
MIMAT0014994hsa-miR-3130-3p3......__875
MIMAT0014967oar-miR-29a3_......_875
MIMAT0014934mmu-miR-3102-5p.2-5p8_......_375
MIMAT0014849mmu-miR-3070-2-3p6_......_175
MIMAT0014847mmu-miR-3070-3p6_......_175
MIMAT0014747api-miR-9983_......_875
MIMAT0014726api-miR-293_......_875
MIMAT0014601tgu-miR-29b-3p3_......_875
MIMAT0014532tgu-miR-29a-3p3_......_875
MIMAT0014445cqu-miR-9983_......_875
MIMAT0014411cqu-miR-285-3p3_......_875
MIMAT0014273aae-miR-2853_......_875
MIMAT0014227aae-miR-9983_......_875
MIMAT0013956ssc-miR-5002......__775
MIMAT0017374ssc-miR-143-5p6......__175
MIMAT0013226eca-miR-502-3p3......__875
MIMAT0013174eca-miR-770-5p2_......_775
MIMAT0012964eca-miR-29c3_......_875
MIMAT0012941eca-miR-29b3_......_875
MIMAT0012940eca-miR-29a3_......_875
MIMAT0012841rno-miR-675-5p6_......_175
MIMAT0012716hvt-miR-H5-5p8_......_375
MIMAT0013603bmo-miR-9983_......_875
MIMAT0012695isc-miR-2853_......_875
MIMAT0012656dpu-miR-2853_......_875
MIMAT0012454dsi-miR-995-3p3_......_875
MIMAT0012272dps-miR-995-3p3_......_875
MIMAT0011515crm-miR-833_......_875
MIMAT0011508crm-miR-493_......_875
MIMAT0011289dre-miR-2185-5p7......__275
MIMAT0011163hsa-miR-548q8_......_375
MIMAT0009656spu-miR-29a3_......_875
MIMAT0009613sko-miR-29b-3p3_......_875
MIMAT0009612sko-miR-29a3_......_875
MIMAT0009565lgi-miR-293_......_875
MIMAT0009514cte-miR-29b3_......_875
MIMAT0009513cte-miR-29a3_......_875
MIMAT0009471bfl-miR-29a-3p3_......_875
MIMAT0009154bmo-miR-2853_......_875
MIMAT0017340mmu-miR-1930-3p6......__175
MIMAT0009338bta-miR-502a3......__875
MIMAT0009275bta-miR-29d-3p3_......_875
MIMAT0009088dya-miR-2853_......_875
MIMAT0009063dya-miR-337......__275
MIMAT0009042dwi-miR-337......__275
MIMAT0008984dwi-miR-2853_......_875
MIMAT0008969dvi-miR-285-3p3_......_875
MIMAT0008888dsi-miR-2853_......_875
MIMAT0008866dsi-miR-337......__275
MIMAT0008809dse-miR-2853_......_875
MIMAT0008802dse-miR-337......__275
MIMAT0008743dpe-miR-337......__275
MIMAT0008695dmo-miR-337......__275
MIMAT0008651dmo-miR-2853_......_875
MIMAT0008603dgr-miR-337......__275
MIMAT0008581dgr-miR-2853_......_875
MIMAT0008545der-miR-337......__275
MIMAT0008514der-miR-2853_......_875
MIMAT0008461dan-miR-337......__275
MIMAT0008419dan-miR-2853_......_875
MIMAT0008174ptr-miR-5013......__875
MIMAT0008082ptr-miR-29c3_......_875
MIMAT0006761cfa-miR-5023......__875
MIMAT0006759cfa-miR-5002......__775
MIMAT0006705cfa-miR-29c3_......_875
MIMAT0006626cfa-miR-29a3_......_875
MIMAT0006625cfa-miR-29b3_......_875
MIMAT0006507mml-miR-675-5p6_......_175
MIMAT0006366mml-miR-502-3p3......__875
MIMAT0026888mml-miR-500a-3p2......__775
MIMAT0006169mml-miR-29c-3p3_......_875
MIMAT0006168mml-miR-29b-3p3_......_875
MIMAT0007446gga-miR-13547__......275
MIMAT0006144mdo-miR-1544a-5p1......__675
MIMAT0007143oan-miR-143-5p7......__275
MIMAT0006809oan-miR-29b-3p3_......_875
MIMAT0006807oan-miR-29a-3p3_......_875
MIMAT0005861mml-miR-12402__......775
MIMAT0005338rno-miR-770-5p2_......_775
MIMAT0005321rno-miR-500-3p3......__875
MIMAT0005147ppt-miR1038-3p7__......275
MIMAT0004464mdv2-miR-M21-3p3_......_875
MIMAT0005518dme-miR-998-3p3_......_875
MIMAT0005514dme-miR-995-3p3_......_875
MIMAT0004427ame-miR-29b3_......_875
MIMAT0004284hsa-miR-675-5p6_......_175
MIMAT0004164mdo-miR-29a-3p3_......_875
MIMAT0004163mdo-miR-29b-3p3_......_875
MIMAT0003978sme-miR-746-3p3_......_875
MIMAT0003829bta-miR-29c3_......_875
MIMAT0003828bta-miR-29b3_......_875
MIMAT0003677xtr-miR-29c-3p3_......_875
MIMAT0003656xtr-miR-29a3_......_875
MIMAT0003573xtr-miR-29b3_......_875
MIMAT0003572xtr-miR-29d3_......_875
MIMAT0003905ppt-miR12168__......375
MIMAT0003509mmu-miR-501-3p3......__875
MIMAT0003507mmu-miR-500-3p3......__875
MIMAT0004822mmu-miR-770-5p2_......_775
MIMAT0003725mmu-miR-675-5p6_......_175
MIMAT0003433rlcv-miR-rL1-5-3p2_......_775
MIMAT0003411ebv-miR-BART3-3p2_......_775
MIMAT0003261hsa-miR-593-5p3_......_875
MIMAT0003166mmu-miR-5466__......175
MIMAT0017200rno-miR-224-3p8__......375
MIMAT0017198rno-miR-501-3p3......__875
MIMAT0003056tni-miR-29b3_......_875
MIMAT0003055fru-miR-29b3_......_875
MIMAT0003054tni-miR-29a3_......_875
MIMAT0003053fru-miR-29a3_......_875
MIMAT0002886osa-miR530-3p7......__275
MIMAT0004775hsa-miR-502-3p3......__875
MIMAT0004774hsa-miR-501-3p3......__875
MIMAT0002871hsa-miR-500a-3p2......__775
MIMAT0002441mne-miR-29b3_......_875
MIMAT0002440sla-miR-29b3_......_875
MIMAT0002439ppa-miR-29b3_......_875
MIMAT0002438age-miR-29b3_......_875
MIMAT0002437lla-miR-29b3_......_875
MIMAT0002436ggo-miR-29b3_......_875
MIMAT0002435ptr-miR-29b3_......_875
MIMAT0002434ppy-miR-29b3_......_875
MIMAT0002166ssc-miR-29c3_......_875
MIMAT0002137ssc-miR-29b3_......_875
MIMAT0001802dre-miR-29a3_......_875
MIMAT0001801dre-miR-29b3_......_875
MIMAT0015158zma-miR172c-5p3_......_875
MIMAT0015157zma-miR172b-5p3_......_875
MIMAT0015156zma-miR172d-5p3_......_875
MIMAT0001295cbr-miR-833_......_875
MIMAT0001249dps-miR-2853_......_875
MIMAT0001222dps-miR-337......__275
MIMAT0001183gga-miR-29c-3p3_......_875
MIMAT0001097gga-miR-29b-3p3_......_875
MIMAT0001096gga-miR-29a-3p3_......_875
MIMAT0017129rno-miR-143-5p6......__175
MIMAT0000803rno-miR-29c-3p3_......_875
MIMAT0000802rno-miR-29a-3p3_......_875
MIMAT0000801rno-miR-29b-3p3_......_875
MIMAT0000681hsa-miR-29c-3p3_......_875
MIMAT0017062mmu-miR-224-3p8__......375
MIMAT0000536mmu-miR-29c-3p3_......_875
MIMAT0000535mmu-miR-29a-3p3_......_875
MIMAT0000474cbr-miR-493_......_875
MIMAT0004599hsa-miR-143-5p6......__175
MIMAT0000356dme-miR-285-3p3_......_875
MIMAT0017006mmu-miR-143-5p6......__175
MIMAT0000127mmu-miR-29b-3p3_......_875
MIMAT0000100hsa-miR-29b-3p3_......_875
MIMAT0000086hsa-miR-29a-3p3_......_875
MIMAT0000056cel-miR-83-3p3_......_875
MIMAT0000020cel-miR-49-3p3_......_875