VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>tumv-miR-s16
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RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tgcattt`	7
MIMAT0035527	bdi-miR530b	1	`.......`	7	100
MIMAT0035526	bdi-miR530a	1	`.......`	7	100
MIMAT0035311	gsa-miR-277b-3p	8	`.......`	2	100
MIMAT0035297	gsa-miR-277a-3p	8	`.......`	2	100
MIMAT0033785	pxy-miR-277	8	`.......`	2	100
MIMAT0033519	sma-miR-8407-3p	1	`.......`	7	100
MIMAT0033516	sma-miR-8406-5p	8	`.......`	2	100
MIMAT0033449	str-miR-8390-3p	8	`.......`	2	100
MIMAT0031741	bma-miR-232	8	`.......`	2	100
MIMAT0030811	prd-miR-277-3p	8	`.......`	2	100
MIMAT0029755	cbn-miR-232	8	`.......`	2	100
MIMAT0029299	mes-miR530b	1	`.......`	7	100
MIMAT0029298	mes-miR530a	1	`.......`	7	100
MIMAT0028693	mdo-miR-7341-3p	7	`.......`	1	100
MIMAT0026182	cme-miR530a	1	`.......`	7	100
MIMAT0026104	cme-miR530b	1	`.......`	7	100
MIMAT0025521	htu-miR530	1	`.......`	7	100
MIMAT0024959	hme-miR-277	8	`.......`	2	100
MIMAT0027334	ppe-miR6266c	8	`.......`	2	100
MIMAT0027324	ppe-miR6266b	8	`.......`	2	100
MIMAT0027290	ppe-miR6266a	8	`.......`	2	100
MIMAT0027169	lus-miR530b	1	`.......`	7	100
MIMAT0027162	lus-miR530a	1	`.......`	7	100
MIMAT0024443	mse-miR-277	8	`.......`	2	100
MIMAT0023377	hco-miR-277	8	`.......`	2	100
MIMAT0023209	gma-miR530e	1	`.......`	7	100
MIMAT0023199	gma-miR530d	1	`.......`	7	100
MIMAT0023197	gma-miR530c	1	`.......`	7	100
MIMAT0023156	mtr-miR530	1	`.......`	7	100
MIMAT0022463	gma-miR530b	1	`.......`	7	100
MIMAT0021594	asu-miR-5366-5p	8	`.......`	2	100
MIMAT0021003	gma-miR530a	1	`.......`	7	100
MIMAT0020275	emu-miR-4989	8	`.......`	2	100
MIMAT0020272	emu-miR-277	8	`.......`	2	100
MIMAT0020250	egr-miR-4989	8	`.......`	2	100
MIMAT0020247	egr-miR-277	8	`.......`	2	100
MIMAT0020192	dme-miR-4967-5p	1	`.......`	7	100
MIMAT0020447	tcc-miR530b	1	`.......`	7	100
MIMAT0020446	tcc-miR530a	1	`.......`	7	100
MIMAT0018483	csi-miR530b	1	`.......`	7	100
MIMAT0018482	csi-miR530a	1	`.......`	7	100
MIMAT0018431	nlo-miR-277	8	`.......`	2	100
MIMAT0018400	ngi-miR-277	8	`.......`	2	100
MIMAT0018837	tca-miR-3872-3p	1	`.......`	7	100
MIMAT0016269	sja-miR-277	8	`.......`	2	100
MIMAT0015683	nvi-miR-277	8	`.......`	2	100
MIMAT0014722	api-miR-277	8	`.......`	2	100
MIMAT0014371	cqu-miR-277	8	`.......`	2	100
MIMAT0014211	aae-miR-277-3p	8	`.......`	2	100
MIMAT0013575	cte-miR-277b	8	`.......`	2	100
MIMAT0013531	cte-miR-277a	8	`.......`	2	100
MIMAT0012593	aqc-miR530	1	`.......`	7	100
MIMAT0011699	ppc-miR-232	8	`.......`	2	100
MIMAT0011516	crm-miR-232	8	`.......`	2	100
MIMAT0009822	nve-miR-2049-5p	8	`.......`	2	100
MIMAT0009099	dya-miR-277	8	`.......`	2	100
MIMAT0009040	dwi-miR-277	8	`.......`	2	100
MIMAT0008946	dvi-miR-277-3p	8	`.......`	2	100
MIMAT0008850	dsi-miR-277	8	`.......`	2	100
MIMAT0008794	dse-miR-277	8	`.......`	2	100
MIMAT0008702	dpe-miR-277	8	`.......`	2	100
MIMAT0008685	dmo-miR-277	8	`.......`	2	100
MIMAT0008556	dgr-miR-277	8	`.......`	2	100
MIMAT0008517	der-miR-277	8	`.......`	2	100
MIMAT0008407	dan-miR-277	8	`.......`	2	100
MIMAT0008382	tca-miR-277-3p	8	`.......`	2	100
MIMAT0005998	ptc-miR530b	1	`.......`	7	100
MIMAT0005997	ptc-miR530a	1	`.......`	7	100
MIMAT0004024	sme-miR-277d-3p	8	`.......`	2	100
MIMAT0004010	sme-miR-277c-3p	8	`.......`	2	100
MIMAT0004009	sme-miR-277b-3p	8	`.......`	2	100
MIMAT0004007	sme-miR-277a-3p	8	`.......`	2	100
MIMAT0012113	sme-miR-124b-5p	1	`.......`	7	100
MIMAT0004203	bmo-miR-277-3p	8	`.......`	2	100
MIMAT0006787	osa-miR530-5p	1	`.......`	7	100
MIMAT0001510	aga-miR-277	8	`.......`	2	100
MIMAT0001481	ame-miR-277	8	`.......`	2	100
MIMAT0001241	dps-miR-277	8	`.......`	2	100
MIMAT0000497	cbr-miR-232	8	`.......`	2	100
MIMAT0000338	dme-miR-277-3p	8	`.......`	2	100
MIMAT0000287	cel-miR-232-3p	8	`.......`	2	100
MIMAT0036823	oha-miR-20a-3p	3	`......_`	8	85
MIMAT0036717	oha-miR-1397-5p	1	`......_`	6	85
MIMAT0036555	tch-miR-9771i	6	`_......`	1	85
MIMAT0036055	chi-miR-20a-3p	3	`......_`	8	85
MIMAT0035904	chi-miR-105b-5p	8	`_......`	3	85
MIMAT0035903	chi-miR-105a	8	`_......`	3	85
MIMAT0035878	bra-miR161-5p	8	`......_`	3	85
MIMAT0035445	sly-miR5302b-5p	8	`_......`	3	85
MIMAT0035155	efu-miR-502	6	`......_`	1	85
MIMAT0035152	efu-miR-500	6	`......_`	1	85
MIMAT0034347	cfa-miR-8852	1	`......_`	6	85
MIMAT0034145	gra-miR8771e	2	`_......`	7	85
MIMAT0033458	str-miR-8393-5p	2	`_......`	7	85
MIMAT0033131	ppc-miR-8303-2-3p	8	`......_`	3	85
MIMAT0033128	ppc-miR-8303-3p	8	`......_`	3	85
MIMAT0033040	ppc-miR-84e-3p	1	`......_`	6	85
MIMAT0032739	ssa-miR-734-3p	7	`_......`	2	85
MIMAT0032651	ssa-miR-460-5p	3	`......_`	8	85
MIMAT0032387	ssa-miR-153a-5p	2	`_......`	7	85
MIMAT0031513	ppe-miR530	3	`......_`	8	85
MIMAT0031330	stu-miR530	3	`......_`	8	85
MIMAT0030504	prd-miR-7876-5p	6	`......_`	1	85
MIMAT0030504	prd-miR-7876-5p	3	`......_`	8	85
MIMAT0030428	hsa-miR-7853-5p	8	`_......`	3	85
MIMAT0030014	mtr-miR2592br-3p	6	`_......`	1	85
MIMAT0030012	mtr-miR2592bq-3p	6	`_......`	1	85
MIMAT0030009	mtr-miR2592bp-5p	6	`_......`	1	85
MIMAT0030008	mtr-miR2592bo-3p	6	`_......`	1	85
MIMAT0029742	cbn-miR-357	6	`_......`	1	85
MIMAT0029368	lja-miR7541	1	`......_`	6	85
MIMAT0028973	oan-miR-1421an-3p	1	`......_`	6	85
MIMAT0028857	mdo-miR-7386f-3p	6	`_......`	1	85
MIMAT0028319	mml-miR-7183-3p	1	`_......`	6	85
MIMAT0026318	ccr-miR-734	7	`_......`	2	85
MIMAT0026306	ccr-miR-460-5p	3	`......_`	8	85
MIMAT0025397	tgu-miR-1397-5p	1	`......_`	6	85
MIMAT0027299	ppe-miR6273	6	`......_`	1	85
MIMAT0024187	ggo-miR-502a	6	`......_`	1	85
MIMAT0023976	cgr-miR-501-3p	6	`......_`	1	85
MIMAT0023974	cgr-miR-500	6	`......_`	1	85
MIMAT0022642	ola-miR-460-5p	3	`......_`	8	85
MIMAT0022089	aca-miR-5461	8	`......_`	3	85
MIMAT0021970	aca-miR-460a-5p	3	`......_`	8	85
MIMAT0021862	aca-miR-20a-3p	3	`......_`	8	85
MIMAT0021764	aca-miR-1397	1	`......_`	6	85
MIMAT0021290	mtr-miR5267o	3	`_......`	8	85
MIMAT0021289	mtr-miR5267n	3	`_......`	8	85
MIMAT0021288	mtr-miR5267m	3	`_......`	8	85
MIMAT0021287	mtr-miR5267l	3	`_......`	8	85
MIMAT0021286	mtr-miR5267k	3	`_......`	8	85
MIMAT0021285	mtr-miR5267j	3	`_......`	8	85
MIMAT0021284	mtr-miR5267i	3	`_......`	8	85
MIMAT0021283	mtr-miR5267h	3	`_......`	8	85
MIMAT0021282	mtr-miR5267g	3	`_......`	8	85
MIMAT0021281	mtr-miR5267f	3	`_......`	8	85
MIMAT0021280	mtr-miR5267e	3	`_......`	8	85
MIMAT0021279	mtr-miR5267d	3	`_......`	8	85
MIMAT0021278	mtr-miR5267c	3	`_......`	8	85
MIMAT0021277	mtr-miR5267b	3	`_......`	8	85
MIMAT0021276	mtr-miR5267a	3	`_......`	8	85
MIMAT0021171	mtr-miR2592ao	6	`_......`	1	85
MIMAT0021170	mtr-miR2592an	6	`_......`	1	85
MIMAT0020162	dme-miR-4950-5p	6	`_......`	1	85
MIMAT0020135	cel-miR-4929	6	`......_`	1	85
MIMAT0019990	cel-miR-4807	6	`_......`	1	85
MIMAT0019589	pma-miR-4557	6	`_......`	1	85
MIMAT0019396	pma-miR-20a-3p	3	`......_`	8	85
MIMAT0018021	vvi-miR3629a-5p	2	`_......`	7	85
MIMAT0016828	cin-miR-4207-3p	2	`_......`	7	85
MIMAT0016806	cin-miR-4188-5p	8	`_......`	3	85
MIMAT0016028	ppy-miR-586	3	`......_`	8	85
MIMAT0015925	ppy-miR-502-3p	6	`......_`	1	85
MIMAT0015923	ppy-miR-501-3p	6	`......_`	1	85
MIMAT0017441	aly-miR161-5p.2	8	`......_`	3	85
MIMAT0015504	bmo-miR-3316	1	`......_`	6	85
MIMAT0014793	api-miR-3052	1	`......_`	6	85
MIMAT0014614	tgu-miR-460a-5p	3	`......_`	8	85
MIMAT0026998	tgu-miR-20a-3p	3	`......_`	8	85
MIMAT0016958	rlcv-miR-rL1-32-3p	7	`_......`	2	85
MIMAT0013226	eca-miR-502-3p	6	`......_`	1	85
MIMAT0013193	eca-miR-105	8	`_......`	3	85
MIMAT0012758	mdo-miR-460-5p	3	`......_`	8	85
MIMAT0013710	bmo-miR-2804-3p	3	`......_`	8	85
MIMAT0013355	mtr-miR2592n	6	`_......`	1	85
MIMAT0013354	mtr-miR2592m	6	`_......`	1	85
MIMAT0013353	mtr-miR2592l	6	`_......`	1	85
MIMAT0013352	mtr-miR2592k	6	`_......`	1	85
MIMAT0013351	mtr-miR2592h	6	`_......`	1	85
MIMAT0013350	mtr-miR2592g	6	`_......`	1	85
MIMAT0013349	mtr-miR2592a.2-3p	6	`_......`	1	85
MIMAT0013279	mtr-miR2592s-3p	6	`_......`	1	85
MIMAT0013278	mtr-miR2592r	6	`_......`	1	85
MIMAT0013277	mtr-miR2592q-3p	6	`_......`	1	85
MIMAT0013276	mtr-miR2592p	6	`_......`	1	85
MIMAT0013275	mtr-miR2592o-3p	6	`_......`	1	85
MIMAT0013274	mtr-miR2592j	6	`_......`	1	85
MIMAT0013273	mtr-miR2592i	6	`_......`	1	85
MIMAT0013272	mtr-miR2592f	6	`_......`	1	85
MIMAT0013271	mtr-miR2592e-3p	6	`_......`	1	85
MIMAT0013270	mtr-miR2592d-3p	6	`_......`	1	85
MIMAT0013269	mtr-miR2592c	6	`_......`	1	85
MIMAT0013268	mtr-miR2592b-3p	6	`_......`	1	85
MIMAT0011866	bta-miR-2333	8	`......_`	3	85
MIMAT0011604	crm-miR-357	7	`_......`	2	85
MIMAT0011279	sme-miR-2177-3p	6	`_......`	1	85
MIMAT0010018	ppt-miR2084	3	`......_`	8	85
MIMAT0010198	cfa-miR-105b	8	`_......`	3	85
MIMAT0009879	cfa-miR-105a	8	`_......`	3	85
MIMAT0009568	lgi-miR-33-3p	8	`......_`	3	85
MIMAT0009338	bta-miR-502a	6	`......_`	1	85
MIMAT0009217	bta-miR-105a	8	`_......`	3	85
MIMAT0009216	bta-miR-105b	8	`_......`	3	85
MIMAT0008258	ptr-miR-586	3	`......_`	8	85
MIMAT0008174	ptr-miR-501	6	`......_`	1	85
MIMAT0006761	cfa-miR-502	6	`......_`	1	85
MIMAT0006366	mml-miR-502-3p	6	`......_`	1	85
MIMAT0007594	gga-miR-1702	3	`......_`	8	85
MIMAT0007283	gga-miR-1397-5p	1	`......_`	6	85
MIMAT0007199	oan-miR-1397-5p	1	`......_`	6	85
MIMAT0009169	oan-miR-20a-2-3p	3	`......_`	8	85
MIMAT0007146	oan-miR-20a-1-3p	3	`......_`	8	85
MIMAT0007083	oan-miR-1421r-3p	1	`......_`	6	85
MIMAT0007073	oan-miR-1421m-3p	1	`......_`	6	85
MIMAT0006915	oan-miR-460-5p	3	`......_`	8	85
MIMAT0005634	bna-miR161	8	`......_`	3	85
MIMAT0005832	mmu-miR-669g	1	`......_`	6	85
MIMAT0005321	rno-miR-500-3p	6	`......_`	1	85
MIMAT0005201	ppt-miR1072	1	`......_`	6	85
MIMAT0026707	mdo-miR-20a-3p	3	`......_`	8	85
MIMAT0012090	sme-miR-1a-5p	2	`_......`	7	85
MIMAT0003778	gga-miR-460a-5p	3	`......_`	8	85
MIMAT0003765	dre-miR-734	8	`_......`	3	85
MIMAT0003509	mmu-miR-501-3p	6	`......_`	1	85
MIMAT0003507	mmu-miR-500-3p	6	`......_`	1	85
MIMAT0003426	ebv-miR-BART14-3p	7	`_......`	2	85
MIMAT0003252	hsa-miR-586	3	`......_`	8	85
MIMAT0017198	rno-miR-501-3p	6	`......_`	1	85
MIMAT0004775	hsa-miR-502-3p	6	`......_`	1	85
MIMAT0004774	hsa-miR-501-3p	6	`......_`	1	85
MIMAT0026597	mml-miR-20a-3p	3	`......_`	8	85
MIMAT0002457	mne-miR-105	8	`_......`	3	85
MIMAT0002456	lla-miR-105	8	`_......`	3	85
MIMAT0002455	sla-miR-105	8	`_......`	3	85
MIMAT0002454	mml-miR-105-5p	8	`_......`	3	85
MIMAT0002453	ptr-miR-105	8	`_......`	3	85
MIMAT0002452	ppa-miR-105	8	`_......`	3	85
MIMAT0002451	ggo-miR-105	8	`_......`	3	85
MIMAT0002450	ppy-miR-105	8	`_......`	3	85
MIMAT0002117	ssc-miR-105-2	8	`_......`	3	85
MIMAT0002116	ssc-miR-105-1	8	`_......`	3	85
MIMAT0001887	dre-miR-460-5p	3	`......_`	8	85
MIMAT0001298	cbr-miR-357	7	`_......`	2	85
MIMAT0022883	osa-miR166i-5p	6	`......_`	1	85
MIMAT0031896	cel-lsy-6-5p	6	`_......`	1	85
MIMAT0000699	cel-miR-357-3p	6	`_......`	1	85
MIMAT0000603	rno-miR-20a-3p	3	`......_`	8	85
MIMAT0004627	mmu-miR-20a-3p	3	`......_`	8	85
MIMAT0006779	ath-miR161.2	8	`......_`	3	85
MIMAT0000102	hsa-miR-105-5p	8	`_......`	3	85
MIMAT0004493	hsa-miR-20a-3p	3	`......_`	8	85