| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tgcgtgtc | 8 | ||
| MIMAT0025861 | blv-miR-B2-3p | 1 | ........ | 8 | 100 |
| MIMAT0013395 | mtr-miR2631 | 8 | _....... | 2 | 87 |
| MIMAT0012206 | dme-miR-2496-5p | 2 | ......._ | 8 | 87 |
| MIMAT0034528 | eca-miR-8991 | 1 | .a...... | 8 | 87 |
| MIMAT0037300 | ame-miR-9895 | 2 | __...... | 7 | 75 |
| MIMAT0036012 | chi-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0030734 | prd-miR-7938-5p | 1 | __...... | 6 | 75 |
| MIMAT0030356 | hhi-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0029442 | ipu-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0026245 | ccr-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0027542 | hsa-miR-6821-5p | 2 | ......__ | 7 | 75 |
| MIMAT0027449 | hsa-miR-6774-3p | 2 | __...... | 7 | 75 |
| MIMAT0027256 | pgi-miR6135k | 1 | __...... | 6 | 75 |
| MIMAT0023815 | cgr-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0022171 | osa-miR5535 | 3 | ......__ | 8 | 75 |
| MIMAT0021883 | aca-miR-2188-3p | 3 | ......__ | 8 | 75 |
| MIMAT0021816 | aca-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0021543 | asu-miR-100e-3p | 6 | ......__ | 1 | 75 |
| MIMAT0020587 | ssc-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0019817 | hsa-miR-4711-3p | 1 | __...... | 6 | 75 |
| MIMAT0019656 | pma-miR-4622 | 8 | __...... | 3 | 75 |
| MIMAT0019640 | pma-miR-4606 | 1 | ......__ | 6 | 75 |
| MIMAT0019235 | hsa-miR-4520-5p | 3 | ......__ | 8 | 75 |
| MIMAT0018986 | hsa-miR-4462 | 7 | __...... | 2 | 75 |
| MIMAT0016750 | cin-miR-4147-3p | 3 | __...... | 8 | 75 |
| MIMAT0016044 | ppy-miR-602 | 6 | __...... | 1 | 75 |
| MIMAT0015612 | bmo-miR-3406-3p | 3 | _......_ | 8 | 75 |
| MIMAT0014567 | tgu-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0014210 | aae-miR-277-5p | 1 | __...... | 6 | 75 |
| MIMAT0012999 | eca-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0012808 | ptr-miR-602 | 6 | __...... | 1 | 75 |
| MIMAT0012517 | dsi-miR-2580 | 1 | __...... | 6 | 75 |
| MIMAT0012351 | dps-miR-2545a-3p | 8 | ......__ | 3 | 75 |
| MIMAT0012316 | dps-miR-2545b | 8 | ......__ | 3 | 75 |
| MIMAT0009843 | cfa-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0009248 | bta-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0032072 | dvi-miR-277-5p | 1 | __...... | 6 | 75 |
| MIMAT0006221 | mml-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0007394 | gma-miR1532 | 7 | _......_ | 2 | 75 |
| MIMAT0007295 | gga-miR-1434 | 2 | ......__ | 7 | 75 |
| MIMAT0007267 | oan-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0006972 | oan-miR-1421e-3p | 1 | ......__ | 6 | 75 |
| MIMAT0006872 | oan-miR-1341 | 2 | ......__ | 7 | 75 |
| MIMAT0005229 | smo-miR536 | 2 | __...... | 7 | 75 |
| MIMAT0004120 | mdo-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0003832 | bta-miR-425-5p | 8 | __...... | 3 | 75 |
| MIMAT0003614 | xtr-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0003483 | mmu-miR-696 | 1 | _......_ | 6 | 75 |
| MIMAT0003270 | hsa-miR-602 | 6 | __...... | 1 | 75 |
| MIMAT0002931 | tni-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0002930 | fru-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0002518 | ppa-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0002517 | mne-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0002516 | ppy-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0002515 | ggo-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0001274 | dre-miR-187 | 2 | __...... | 7 | 75 |
| MIMAT0001124 | gga-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0000864 | rno-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0020804 | dme-miR-277-5p | 1 | __...... | 6 | 75 |
| MIMAT0000262 | hsa-miR-187-3p | 2 | __...... | 7 | 75 |
| MIMAT0000216 | mmu-miR-187-3p | 2 | __...... | 7 | 75 |
