VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mdv1-miR-m31
ugcuacag

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tgctacag`	8
MIMAT0018175	mghv-miR-M1-14-3p	1	`........`	8	100
MIMAT0007893	mdv1-miR-M31	1	`........`	8	100
MIMAT0024285	ggo-miR-508	8	`_.......`	2	87
MIMAT0022083	aca-miR-5456	8	`_.......`	2	87
MIMAT0016649	cin-miR-4080-5p	1	`......._`	7	87
MIMAT0015020	hsa-miR-548v	2	`_.......`	8	87
MIMAT0015005	hsa-miR-3137	8	`_.......`	2	87
MIMAT0030137	bdi-miR7710-5p	1	`.a......`	8	87
MIMAT0029352	lja-miR7529	8	`......g.`	1	87
MIMAT0021435	asu-miR-43e-5p	8	`......c.`	1	87
MIMAT0036851	oha-miR-222b-3p	2	`_......_`	7	75
MIMAT0036849	oha-miR-222a-3p	2	`_......_`	7	75
MIMAT0036847	oha-miR-221-3p	2	`_......_`	7	75
MIMAT0036715	oha-miR-139-5p	2	`__......`	7	75
MIMAT0036600	tch-miR-222-3p	2	`_......_`	7	75
MIMAT0036540	tch-miR-139-5p	2	`__......`	7	75
MIMAT0036523	tch-miR-221-3p	2	`_......_`	7	75
MIMAT0036070	chi-miR-222-3p	2	`_......_`	7	75
MIMAT0036069	chi-miR-221-3p	2	`_......_`	7	75
MIMAT0034638	eca-miR-9093	6	`__......`	1	75
MIMAT0034375	cfa-miR-8875	8	`__......`	3	75
MIMAT0033812	pxy-miR-8544-3p	8	`_......_`	3	75
MIMAT0033749	pxy-miR-2756	6	`_......_`	1	75
MIMAT0033042	ppc-miR-8272-3p	8	`......__`	3	75
MIMAT0032543	ssa-miR-222b-3p	2	`_......_`	7	75
MIMAT0032541	ssa-miR-222a-3p	2	`_......_`	7	75
MIMAT0032539	ssa-miR-221-5p	2	`_......_`	7	75
MIMAT0032394	ssa-miR-15a-5p	7	`......__`	2	75
MIMAT0032368	ssa-miR-144-3p	1	`__......`	6	75
MIMAT0032356	ssa-miR-139-5p	2	`__......`	7	75
MIMAT0031709	bbe-miR-4891-3p	8	`......__`	3	75
MIMAT0031677	bbe-miR-4057-3p	3	`......__`	8	75
MIMAT0031468	ppe-miR172a-5p	6	`......__`	1	75
MIMAT0031290	stu-miR172a-5p	6	`......__`	1	75
MIMAT0031260	stu-miR399i-5p	3	`_......_`	8	75
MIMAT0030616	prd-miR-993-5p	8	`__......`	3	75
MIMAT0030601	prd-miR-7901-3p	8	`__......`	3	75
MIMAT0030441	bta-miR-7861	1	`......__`	6	75
MIMAT0030047	oar-miR-221	2	`_......_`	7	75
MIMAT0029476	ipu-miR-221	2	`_......_`	7	75
MIMAT0029421	ipu-miR-144	1	`__......`	6	75
MIMAT0029416	ipu-miR-139	2	`__......`	7	75
MIMAT0029161	ghr-miR7512	1	`......__`	6	75
MIMAT0028213	hsa-miR-7151-3p	1	`__......`	6	75
MIMAT0026274	ccr-miR-222	2	`_......_`	7	75
MIMAT0026273	ccr-miR-221	2	`_......_`	7	75
MIMAT0026225	ccr-miR-144	1	`__......`	6	75
MIMAT0026219	ccr-miR-139	2	`__......`	7	75
MIMAT0028034	mmu-miR-7065-5p	8	`_......_`	3	75
MIMAT0028015	mmu-miR-7055-3p	2	`......__`	7	75
MIMAT0025618	gga-miR-222b-3p	2	`_......_`	7	75
MIMAT0025449	pol-miR-221-3p	2	`_......_`	7	75
MIMAT0024874	osa-miR6251	8	`_......_`	3	75
MIMAT0024106	ggo-miR-139	2	`__......`	7	75
MIMAT0024092	ggo-miR-222	2	`_......_`	7	75
MIMAT0024026	ptr-miR-222	2	`_......_`	7	75
MIMAT0023861	cgr-miR-222-3p	2	`_......_`	7	75
MIMAT0023859	cgr-miR-221-3p	2	`_......_`	7	75
MIMAT0023765	cgr-miR-139-5p	2	`__......`	7	75
MIMAT0022803	sha-miR-139	2	`__......`	7	75
MIMAT0022797	sha-miR-221	2	`_......_`	7	75
MIMAT0022796	sha-miR-222	2	`_......_`	7	75
MIMAT0022616	ola-miR-139	2	`__......`	7	75
MIMAT0022531	ola-miR-222	2	`_......_`	7	75
MIMAT0022530	ola-miR-221	2	`_......_`	7	75
MIMAT0022470	hsa-miR-5682	6	`......__`	1	75
MIMAT0022013	aca-miR-5402-3p	8	`__......`	3	75
MIMAT0021892	aca-miR-222a-3p	2	`_......_`	7	75
MIMAT0021890	aca-miR-221-3p	2	`_......_`	7	75
MIMAT0021815	aca-miR-187-5p	1	`_......_`	6	75
MIMAT0021762	aca-miR-139-5p	2	`__......`	7	75
MIMAT0021395	rmi-miR-5322	8	`__......`	3	75
MIMAT0021384	isc-miR-5313	7	`_......_`	2	75
MIMAT0021265	mtr-miR172c-5p	6	`......__`	1	75
MIMAT0022984	hsa-miR-5089-3p	2	`......__`	7	75
MIMAT0020465	bfl-miR-4057	3	`......__`	8	75
MIMAT0019534	pma-miR-222-3p	2	`_......_`	7	75
MIMAT0019532	pma-miR-221	2	`_......_`	7	75
MIMAT0016784	cin-miR-4175-3p	8	`_......_`	3	75
MIMAT0016604	cin-miR-4057-3p	3	`......__`	8	75
MIMAT0016147	ppy-miR-1183	8	`__......`	3	75
MIMAT0015808	ppy-miR-222	2	`_......_`	7	75
MIMAT0015761	ppy-miR-139-5p	2	`__......`	7	75
MIMAT0017618	aly-miR834-3p	8	`......__`	3	75
MIMAT0027004	tgu-miR-187-5p	1	`_......_`	6	75
MIMAT0014514	tgu-miR-222-3p	2	`_......_`	7	75
MIMAT0014512	tgu-miR-221-3p	2	`_......_`	7	75
MIMAT0014500	tgu-miR-139-5p	2	`__......`	7	75
MIMAT0019191	rlcv-miR-rL1-26-5p	1	`_......_`	6	75
MIMAT0013942	ssc-miR-222	2	`_......_`	7	75
MIMAT0013204	eca-miR-222	2	`_......_`	7	75
MIMAT0013203	eca-miR-221	2	`_......_`	7	75
MIMAT0012983	eca-miR-139-5p	2	`__......`	7	75
MIMAT0012867	hvt-miR-H14-3p	2	`_......_`	7	75
MIMAT0012744	mdo-miR-139-5p	2	`__......`	7	75
MIMAT0011303	dre-miR-222b	2	`_......_`	7	75
MIMAT0009851	cfa-miR-222	2	`_......_`	7	75
MIMAT0009837	cfa-miR-10b	8	`__......`	3	75
MIMAT0009710	cte-miR-1999	8	`_......_`	3	75
MIMAT0009391	mmu-miR-1928	2	`_......_`	7	75
MIMAT0008076	ptr-miR-221	2	`_......_`	7	75
MIMAT0007951	ptr-miR-1183	8	`__......`	3	75
MIMAT0007762	ssc-miR-221-3p	2	`_......_`	7	75
MIMAT0006757	cfa-miR-221	2	`_......_`	7	75
MIMAT0006250	mml-miR-222-3p	2	`_......_`	7	75
MIMAT0026833	mml-miR-187-5p	2	`_......_`	7	75
MIMAT0006195	mml-miR-139-5p	2	`__......`	7	75
MIMAT0026799	mml-miR-20b-3p	8	`__......`	3	75
MIMAT0007686	gga-miR-1775-3p	8	`__......`	3	75
MIMAT0007584	gga-miR-1692	6	`_......_`	1	75
MIMAT0007335	gga-miR-1457	3	`__......`	8	75
MIMAT0007266	oan-miR-187-5p	1	`_......_`	6	75
MIMAT0007135	oan-miR-221-3p	2	`_......_`	7	75
MIMAT0007133	oan-miR-222a-3p	2	`_......_`	7	75
MIMAT0007057	oan-miR-222b-3p	2	`_......_`	7	75
MIMAT0006904	oan-miR-139-5p	2	`__......`	7	75
MIMAT0005828	hsa-miR-1183	8	`__......`	3	75
MIMAT0004254	ath-miR834	8	`......__`	3	75
MIMAT0004160	mdo-miR-221-3p	2	`_......_`	7	75
MIMAT0004159	mdo-miR-222a	2	`_......_`	7	75
MIMAT0026674	mdo-miR-187-5p	3	`_......_`	8	75
MIMAT0003788	bta-miR-139	2	`__......`	7	75
MIMAT0003776	gga-miR-144-3p	1	`__......`	6	75
MIMAT0003700	xtr-miR-221	2	`_......_`	7	75
MIMAT0003633	xtr-miR-222	2	`_......_`	7	75
MIMAT0003600	xtr-miR-139	2	`__......`	7	75
MIMAT0003530	bta-miR-222	2	`_......_`	7	75
MIMAT0003529	bta-miR-221	2	`_......_`	7	75
MIMAT0003446	rlcv-miR-rL1-15-3p	8	`__......`	3	75
MIMAT0003349	dre-miR-139-5p	2	`__......`	7	75
MIMAT0002907	tni-miR-221	2	`_......_`	7	75
MIMAT0002906	fru-miR-221	2	`_......_`	7	75
MIMAT0002905	tni-miR-222	2	`_......_`	7	75
MIMAT0002904	fru-miR-222	2	`_......_`	7	75
MIMAT0002587	age-miR-222	2	`_......_`	7	75
MIMAT0002586	ppa-miR-221	2	`_......_`	7	75
MIMAT0002585	ppy-miR-221	2	`_......_`	7	75
MIMAT0002584	ggo-miR-221	2	`_......_`	7	75
MIMAT0002583	mml-miR-221-3p	2	`_......_`	7	75
MIMAT0002473	ppa-miR-139	2	`__......`	7	75
MIMAT0002472	lla-miR-139	2	`__......`	7	75
MIMAT0002183	kshv-miR-K12-2-5p	8	`__......`	3	75
MIMAT0002159	ssc-miR-139-5p	2	`__......`	7	75
MIMAT0020921	gma-miR172b-5p	6	`......__`	1	75
MIMAT0004752	hsa-miR-20b-3p	7	`__......`	2	75
MIMAT0001289	dre-miR-222a-3p	2	`_......_`	7	75
MIMAT0001288	dre-miR-221-3p	2	`_......_`	7	75
MIMAT0026507	gga-miR-187-5p	2	`_......_`	7	75
MIMAT0026504	gga-miR-196-2-3p	1	`__......`	6	75
MIMAT0001108	gga-miR-221-3p	2	`_......_`	7	75
MIMAT0001107	gga-miR-222a	2	`_......_`	7	75
MIMAT0000891	rno-miR-222-3p	2	`_......_`	7	75
MIMAT0000890	rno-miR-221-3p	2	`_......_`	7	75
MIMAT0017144	rno-miR-187-5p	3	`_......_`	8	75
MIMAT0000845	rno-miR-139-5p	2	`__......`	7	75
MIMAT0000783	rno-miR-10b-5p	8	`__......`	3	75
MIMAT0000670	mmu-miR-222-3p	2	`_......_`	7	75
MIMAT0000669	mmu-miR-221-3p	2	`_......_`	7	75
MIMAT0000656	mmu-miR-139-5p	2	`__......`	7	75
MIMAT0000279	hsa-miR-222-3p	2	`_......_`	7	75
MIMAT0000278	hsa-miR-221-3p	2	`_......_`	7	75
MIMAT0004561	hsa-miR-187-5p	2	`_......_`	7	75
MIMAT0000250	hsa-miR-139-5p	2	`__......`	7	75
MIMAT0016997	mmu-miR-187-5p	3	`_......_`	8	75
MIMAT0015106	cel-miR-65-3p	2	`......__`	7	75