VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hbv-miR-b20-3p
ugcuggu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tgctggt`	7
MIMAT0018828	tca-miR-3868-5p	7	`.......`	1	100
MIMAT0014456	tgu-miR-2958	1	`.......`	7	100
MIMAT0031158	hbv-miR-B20-3p	2	`.......`	8	100
MIMAT0010049	osa-miR2092-3p	7	`.......`	1	100
MIMAT0008291	ptr-miR-634	8	`.......`	2	100
MIMAT0007533	gga-miR-1654	2	`.......`	8	100
MIMAT0004967	cre-miR909.1	1	`.......`	7	100
MIMAT0003304	hsa-miR-634	8	`.......`	2	100
MIMAT0020303	cel-miR-35-5p	1	`.......`	7	100
MIMAT0036926	oha-miR-449a-3p	6	`_......`	1	85
MIMAT0036710	oha-miR-138-5p	2	`_......`	7	85
MIMAT0036703	oha-miR-133a-3-5p	1	`_......`	6	85
MIMAT0036701	oha-miR-133b-5p	1	`_......`	6	85
MIMAT0036700	oha-miR-133a-2-5p	2	`_......`	7	85
MIMAT0036698	oha-miR-133a-1-5p	2	`_......`	7	85
MIMAT0035947	chi-miR-133a-5p	2	`_......`	7	85
MIMAT0035863	bra-miR6032-3p	3	`......_`	8	85
MIMAT0035063	efu-miR-138a	2	`_......`	7	85
MIMAT0035044	efu-miR-133-5p	2	`_......`	7	85
MIMAT0035034	efu-miR-138b	2	`_......`	7	85
MIMAT0034854	efu-miR-9238	8	`......_`	3	85
MIMAT0034704	eca-miR-1911	7	`_......`	2	85
MIMAT0034516	eca-miR-8979	1	`......_`	6	85
MIMAT0034460	eca-miR-8932	3	`......_`	8	85
MIMAT0034457	eca-miR-8929	1	`......_`	6	85
MIMAT0034277	pra-miR8788b-3p	3	`_......`	8	85
MIMAT0034275	pra-miR8788a-3p	3	`_......`	8	85
MIMAT0034269	pin-miR8788-3p	3	`_......`	8	85
MIMAT0033378	str-miR-7880q-5p	2	`_......`	7	85
MIMAT0032914	ppc-miR-133-5p	1	`_......`	6	85
MIMAT0032747	ssa-miR-8160-3p	6	`......_`	1	85
MIMAT0032352	ssa-miR-138-5p	2	`_......`	7	85
MIMAT0032341	ssa-miR-133a-3-5p	2	`_......`	7	85
MIMAT0032339	ssa-miR-133b-5p	1	`_......`	6	85
MIMAT0032337	ssa-miR-133a-5p	2	`_......`	7	85
MIMAT0031585	bbe-miR-133-3p	2	`_......`	7	85
MIMAT0029538	ipu-miR-16c	6	`......_`	1	85
MIMAT0029414	ipu-miR-138	2	`_......`	7	85
MIMAT0031113	mdo-miR-133a-2-5p	2	`_......`	7	85
MIMAT0028759	mdo-miR-7368-3p	7	`_......`	2	85
MIMAT0028710	mdo-miR-7349-5p	1	`......_`	6	85
MIMAT0031047	mdo-miR-29b-2-5p	1	`_......`	6	85
MIMAT0028280	mml-miR-133d-5p	2	`_......`	7	85
MIMAT0028151	ssc-miR-7138-5p	8	`......_`	3	85
MIMAT0028150	ssc-miR-7137-3p	2	`_......`	7	85
MIMAT0026218	ccr-miR-138	2	`_......`	7	85
MIMAT0026214	ccr-miR-133a-5p	2	`_......`	7	85
MIMAT0028081	mmu-miR-7087-3p	1	`......_`	6	85
MIMAT0027953	mmu-miR-7024-3p	6	`......_`	1	85
MIMAT0027599	hsa-miR-6849-3p	6	`_......`	1	85
MIMAT0025750	gga-miR-6650-5p	8	`......_`	3	85
MIMAT0025749	gga-miR-6649-3p	1	`......_`	6	85
MIMAT0025706	gga-miR-6611-5p	1	`......_`	6	85
MIMAT0025686	gga-miR-6593-5p	1	`......_`	6	85
MIMAT0025679	gga-miR-6587-3p	1	`......_`	6	85
MIMAT0025432	pol-miR-133-5p	1	`_......`	6	85
MIMAT0025363	ssc-miR-138	2	`_......`	7	85
MIMAT0024624	mml-miR-6131	2	`_......`	7	85
MIMAT0024615	hsa-miR-6131	2	`_......`	7	85
MIMAT0024605	ptr-miR-6131	2	`_......`	7	85
MIMAT0024233	ggo-miR-1287	1	`......_`	6	85
MIMAT0024098	ggo-miR-138	2	`_......`	7	85
MIMAT0023885	cgr-miR-29b-5p	1	`_......`	6	85
MIMAT0023764	cgr-miR-138	2	`_......`	7	85
MIMAT0023480	hco-miR-5973	3	`......_`	8	85
MIMAT0023187	gma-miR5782	3	`_......`	8	85
MIMAT0022831	sha-miR-363	3	`_......`	8	85
MIMAT0022771	sha-miR-138	2	`_......`	7	85
MIMAT0022559	ola-miR-133-5p	2	`_......`	7	85
MIMAT0022554	ola-miR-138	2	`_......`	7	85
MIMAT0022273	hsa-miR-5580-5p	1	`......_`	6	85
MIMAT0021757	aca-miR-138-5p	2	`_......`	7	85
MIMAT0021204	mtr-miR2592bg	3	`_......`	8	85
MIMAT0021203	mtr-miR2592bf	3	`_......`	8	85
MIMAT0021202	mtr-miR2592be	3	`_......`	8	85
MIMAT0021201	mtr-miR2592bd	3	`_......`	8	85
MIMAT0021200	mtr-miR2592bc	3	`_......`	8	85
MIMAT0021199	mtr-miR2592bb	3	`_......`	8	85
MIMAT0021198	mtr-miR2592ba	3	`_......`	8	85
MIMAT0021197	mtr-miR2592az	3	`_......`	8	85
MIMAT0021196	mtr-miR2592ay	3	`_......`	8	85
MIMAT0021195	mtr-miR2592ax	3	`_......`	8	85
MIMAT0021194	mtr-miR2592aw	3	`_......`	8	85
MIMAT0021193	mtr-miR2592av	3	`_......`	8	85
MIMAT0021192	mtr-miR2592au	3	`_......`	8	85
MIMAT0021191	mtr-miR2592at	3	`_......`	8	85
MIMAT0021190	mtr-miR2592as	3	`_......`	8	85
MIMAT0021189	mtr-miR2592ar	3	`_......`	8	85
MIMAT0021188	mtr-miR2592aq	3	`_......`	8	85
MIMAT0021187	mtr-miR2592ap	3	`_......`	8	85
MIMAT0020651	rgl-miR5140	1	`_......`	6	85
MIMAT0021004	gma-miR862a	1	`......_`	6	85
MIMAT0019866	hsa-miR-4738-5p	6	`_......`	1	85
MIMAT0019853	hsa-miR-4731-5p	1	`......_`	6	85
MIMAT0019595	pma-miR-4563	1	`......_`	6	85
MIMAT0019590	pma-miR-4558	1	`......_`	6	85
MIMAT0019470	pma-miR-138b	2	`_......`	7	85
MIMAT0019469	pma-miR-138a	2	`_......`	7	85
MIMAT0019461	pma-miR-133b-5p	2	`_......`	7	85
MIMAT0018717	tca-miR-316-3p	6	`......_`	1	85
MIMAT0018121	hsa-miR-3692-5p	3	`......_`	8	85
MIMAT0018084	hsa-miR-3663-5p	1	`_......`	6	85
MIMAT0018013	vvi-miR3625-5p	8	`......_`	3	85
MIMAT0016851	hsa-miR-4299	1	`_......`	6	85
MIMAT0017872	rno-miR-133c	3	`_......`	8	85
MIMAT0017861	rno-miR-3575	3	`......_`	8	85
MIMAT0016210	ppy-miR-1287	1	`......_`	6	85
MIMAT0016162	ppy-miR-1226	8	`_......`	3	85
MIMAT0015760	ppy-miR-138	2	`_......`	7	85
MIMAT0027005	tgu-miR-133-5p	2	`_......`	7	85
MIMAT0014515	tgu-miR-138-5p	2	`_......`	7	85
MIMAT0012957	eca-miR-1905b	7	`_......`	2	85
MIMAT0012925	eca-miR-138	2	`_......`	7	85
MIMAT0012716	hvt-miR-H5-5p	1	`_......`	6	85
MIMAT0012599	bmo-miR-2723	6	`......_`	1	85
MIMAT0013540	cte-miR-2688-5p	3	`_......`	8	85
MIMAT0011956	bta-miR-2400	6	`......_`	1	85
MIMAT0015299	ssc-miR-133a-5p	2	`_......`	7	85
MIMAT0010151	mcv-miR-M1-3p	3	`......_`	8	85
MIMAT0011163	hsa-miR-548q	1	`_......`	6	85
MIMAT0009971	bta-miR-1287	1	`......_`	6	85
MIMAT0009579	lgi-miR-133-5p	2	`_......`	7	85
MIMAT0019116	tca-miR-133-5p	2	`_......`	7	85
MIMAT0008034	ptr-miR-138	2	`_......`	7	85
MIMAT0006654	cfa-miR-138a	2	`_......`	7	85
MIMAT0006646	cfa-miR-138b	2	`_......`	7	85
MIMAT0006644	cfa-miR-1838	8	`_......`	3	85
MIMAT0006194	mml-miR-138-5p	2	`_......`	7	85
MIMAT0026817	mml-miR-133c-5p	2	`_......`	7	85
MIMAT0031079	mml-miR-29b-2-5p	2	`_......`	7	85
MIMAT0026803	mml-miR-29b-1-5p	2	`_......`	7	85
MIMAT0007593	gga-miR-1701	2	`_......`	7	85
MIMAT0007535	gga-miR-1656	8	`_......`	3	85
MIMAT0015253	cin-miR-92a-5p	3	`_......`	8	85
MIMAT0007240	oan-miR-1419b-5p	3	`......_`	8	85
MIMAT0007216	oan-miR-138-5p	2	`_......`	7	85
MIMAT0006996	oan-miR-133b-5p	1	`_......`	6	85
MIMAT0006864	oan-miR-133a-5p	2	`_......`	7	85
MIMAT0005878	hsa-miR-1287-5p	1	`......_`	6	85
MIMAT0005579	mml-miR-1226	8	`_......`	3	85
MIMAT0005578	ptr-miR-1226	8	`_......`	3	85
MIMAT0005577	hsa-miR-1226-3p	8	`_......`	3	85
MIMAT0005264	smo-miR1107	3	`......_`	8	85
MIMAT0004250	ath-miR832-5p	1	`......_`	6	85
MIMAT0026703	mdo-miR-29b-1-5p	1	`_......`	6	85
MIMAT0004111	mdo-miR-138	2	`_......`	7	85
MIMAT0026665	mdo-miR-133a-1-5p	2	`_......`	7	85
MIMAT0003813	bta-miR-138	2	`_......`	7	85
MIMAT0003599	xtr-miR-138	2	`_......`	7	85
MIMAT0032012	dre-miR-735-5p	2	`_......`	7	85
MIMAT0017205	rno-miR-133b-5p	1	`_......`	6	85
MIMAT0003080	tni-miR-138	2	`_......`	7	85
MIMAT0003079	fru-miR-138	2	`_......`	7	85
MIMAT0002188	kshv-miR-K12-6-5p	6	`......_`	1	85
MIMAT0001835	dre-miR-138-5p	2	`_......`	7	85
MIMAT0031971	dre-miR-133c-5p	1	`_......`	6	85
MIMAT0003405	dre-miR-133b-5p	1	`_......`	6	85
MIMAT0003404	dre-miR-133a-5p	2	`_......`	7	85
MIMAT0031970	dre-miR-133a-2-5p	2	`_......`	7	85
MIMAT0031072	gga-miR-29b-2-5p	2	`_......`	7	85
MIMAT0026537	gga-miR-133c-5p	1	`_......`	6	85
MIMAT0026509	gga-miR-133a-5p	2	`_......`	7	85
MIMAT0001122	gga-miR-138-5p	2	`_......`	7	85
MIMAT0026488	gga-miR-29b-1-5p	2	`_......`	7	85
MIMAT0000844	rno-miR-138-5p	2	`_......`	7	85
MIMAT0017124	rno-miR-133a-5p	2	`_......`	7	85
MIMAT0017083	mmu-miR-133b-5p	1	`_......`	6	85
MIMAT0000430	hsa-miR-138-5p	2	`_......`	7	85
MIMAT0026478	hsa-miR-133a-5p	2	`_......`	7	85
MIMAT0020806	dme-miR-133-5p	2	`_......`	7	85
MIMAT0000150	mmu-miR-138-5p	2	`_......`	7	85
MIMAT0003473	mmu-miR-133a-5p	1	`_......`	6	85
MIMAT0004523	mmu-miR-29b-1-5p	1	`_......`	6	85
MIMAT0004514	hsa-miR-29b-1-5p	1	`_......`	6	85