RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | tgctggtt | 8 | ||
MIMAT0008291 | ptr-miR-634 | 8 | ........ | 1 | 100 |
MIMAT0003304 | hsa-miR-634 | 8 | ........ | 1 | 100 |
MIMAT0020303 | cel-miR-35-5p | 1 | ........ | 8 | 100 |
MIMAT0033378 | str-miR-7880q-5p | 2 | _....... | 8 | 87 |
MIMAT0032914 | ppc-miR-133-5p | 1 | _....... | 7 | 87 |
MIMAT0031047 | mdo-miR-29b-2-5p | 1 | _....... | 7 | 87 |
MIMAT0024624 | mml-miR-6131 | 2 | _....... | 8 | 87 |
MIMAT0023885 | cgr-miR-29b-5p | 1 | _....... | 7 | 87 |
MIMAT0018828 | tca-miR-3868-5p | 7 | ......._ | 1 | 87 |
MIMAT0014456 | tgu-miR-2958 | 1 | ......._ | 7 | 87 |
MIMAT0031158 | hbv-miR-B20-3p | 2 | ......._ | 8 | 87 |
MIMAT0010049 | osa-miR2092-3p | 7 | ......._ | 1 | 87 |
MIMAT0009579 | lgi-miR-133-5p | 2 | _....... | 8 | 87 |
MIMAT0019116 | tca-miR-133-5p | 2 | _....... | 8 | 87 |
MIMAT0031079 | mml-miR-29b-2-5p | 2 | _....... | 8 | 87 |
MIMAT0026803 | mml-miR-29b-1-5p | 2 | _....... | 8 | 87 |
MIMAT0007593 | gga-miR-1701 | 2 | _....... | 8 | 87 |
MIMAT0007533 | gga-miR-1654 | 2 | ......._ | 8 | 87 |
MIMAT0004967 | cre-miR909.1 | 1 | ......._ | 7 | 87 |
MIMAT0026703 | mdo-miR-29b-1-5p | 1 | _....... | 7 | 87 |
MIMAT0031072 | gga-miR-29b-2-5p | 2 | _....... | 8 | 87 |
MIMAT0026488 | gga-miR-29b-1-5p | 2 | _....... | 8 | 87 |
MIMAT0020806 | dme-miR-133-5p | 2 | _....... | 8 | 87 |
MIMAT0004523 | mmu-miR-29b-1-5p | 1 | _....... | 7 | 87 |
MIMAT0004514 | hsa-miR-29b-1-5p | 1 | _....... | 7 | 87 |
MIMAT0034654 | eca-miR-7035 | 1 | .c...... | 8 | 87 |
MIMAT0034516 | eca-miR-8979 | 1 | ......c. | 8 | 87 |
MIMAT0034392 | cfa-miR-8888 | 1 | .a...... | 8 | 87 |
MIMAT0028710 | mdo-miR-7349-5p | 1 | ......a. | 8 | 87 |
MIMAT0028081 | mmu-miR-7087-3p | 1 | ......c. | 8 | 87 |
MIMAT0025750 | gga-miR-6650-5p | 8 | ......c. | 1 | 87 |
MIMAT0025706 | gga-miR-6611-5p | 1 | ......a. | 8 | 87 |
MIMAT0024233 | ggo-miR-1287 | 1 | ......a. | 8 | 87 |
MIMAT0022273 | hsa-miR-5580-5p | 1 | ......c. | 8 | 87 |
MIMAT0021004 | gma-miR862a | 1 | ......a. | 8 | 87 |
MIMAT0016210 | ppy-miR-1287 | 1 | ......a. | 8 | 87 |
MIMAT0009971 | bta-miR-1287 | 1 | ......a. | 8 | 87 |
MIMAT0005878 | hsa-miR-1287-5p | 1 | ......a. | 8 | 87 |
MIMAT0004760 | mmu-miR-470-3p | 8 | .a...... | 1 | 87 |
MIMAT0036926 | oha-miR-449a-3p | 6 | _......_ | 1 | 75 |
MIMAT0036904 | oha-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0036880 | oha-miR-29b-2-5p | 1 | __...... | 6 | 75 |
MIMAT0036878 | oha-miR-29b-1-5p | 1 | __...... | 6 | 75 |
MIMAT0036710 | oha-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0036703 | oha-miR-133a-3-5p | 1 | _......_ | 6 | 75 |
MIMAT0036701 | oha-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0036700 | oha-miR-133a-2-5p | 2 | _......_ | 7 | 75 |
MIMAT0036698 | oha-miR-133a-1-5p | 2 | _......_ | 7 | 75 |
MIMAT0036150 | chi-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0036114 | chi-miR-29b-5p | 1 | __...... | 6 | 75 |
MIMAT0035947 | chi-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0035863 | bra-miR6032-3p | 3 | ......__ | 8 | 75 |
MIMAT0035505 | bdi-miR9496 | 1 | __...... | 6 | 75 |
MIMAT0035063 | efu-miR-138a | 2 | _......_ | 7 | 75 |
MIMAT0035044 | efu-miR-133-5p | 2 | _......_ | 7 | 75 |
MIMAT0035034 | efu-miR-138b | 2 | _......_ | 7 | 75 |
MIMAT0034854 | efu-miR-9238 | 8 | ......__ | 3 | 75 |
MIMAT0034772 | efu-miR-9192 | 2 | __...... | 7 | 75 |
MIMAT0034762 | eca-miR-9181 | 2 | ......__ | 7 | 75 |
MIMAT0034704 | eca-miR-1911 | 7 | _......_ | 2 | 75 |
MIMAT0034478 | eca-miR-8949 | 7 | __...... | 2 | 75 |
MIMAT0034460 | eca-miR-8932 | 3 | ......__ | 8 | 75 |
MIMAT0034457 | eca-miR-8929 | 1 | ......__ | 6 | 75 |
MIMAT0034294 | cfa-miR-8804 | 7 | ......__ | 2 | 75 |
MIMAT0034277 | pra-miR8788b-3p | 3 | _......_ | 8 | 75 |
MIMAT0034275 | pra-miR8788a-3p | 3 | _......_ | 8 | 75 |
MIMAT0034269 | pin-miR8788-3p | 3 | _......_ | 8 | 75 |
MIMAT0033093 | ppc-miR-8290-5p | 2 | __...... | 7 | 75 |
MIMAT0032747 | ssa-miR-8160-3p | 6 | ......__ | 1 | 75 |
MIMAT0032615 | ssa-miR-338a-3p | 7 | ......__ | 2 | 75 |
MIMAT0032583 | ssa-miR-29a-5p | 1 | __...... | 6 | 75 |
MIMAT0032352 | ssa-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0032341 | ssa-miR-133a-3-5p | 2 | _......_ | 7 | 75 |
MIMAT0032339 | ssa-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0032337 | ssa-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0031664 | bbe-miR-29b-5p | 2 | __...... | 7 | 75 |
MIMAT0031585 | bbe-miR-133-3p | 2 | _......_ | 7 | 75 |
MIMAT0029954 | osa-miR1437b-3p | 2 | ......__ | 7 | 75 |
MIMAT0029653 | cbn-miR-7597 | 7 | __...... | 2 | 75 |
MIMAT0029612 | crm-miR-7597 | 7 | __...... | 2 | 75 |
MIMAT0029582 | cbr-miR-7581 | 7 | __...... | 2 | 75 |
MIMAT0029538 | ipu-miR-16c | 6 | ......__ | 1 | 75 |
MIMAT0029502 | ipu-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0029492 | ipu-miR-29c | 1 | __...... | 6 | 75 |
MIMAT0029414 | ipu-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0031113 | mdo-miR-133a-2-5p | 2 | _......_ | 7 | 75 |
MIMAT0028819 | mdo-miR-7381-3p | 2 | ......__ | 7 | 75 |
MIMAT0028759 | mdo-miR-7368-3p | 7 | _......_ | 2 | 75 |
MIMAT0028280 | mml-miR-133d-5p | 2 | _......_ | 7 | 75 |
MIMAT0028151 | ssc-miR-7138-5p | 8 | ......__ | 3 | 75 |
MIMAT0028150 | ssc-miR-7137-3p | 2 | _......_ | 7 | 75 |
MIMAT0026291 | ccr-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0026218 | ccr-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0026214 | ccr-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0027953 | mmu-miR-7024-3p | 6 | ......__ | 1 | 75 |
MIMAT0027599 | hsa-miR-6849-3p | 6 | _......_ | 1 | 75 |
MIMAT0025749 | gga-miR-6649-3p | 1 | ......__ | 6 | 75 |
MIMAT0025738 | gga-miR-6641-3p | 2 | ......__ | 7 | 75 |
MIMAT0025686 | gga-miR-6593-5p | 1 | ......__ | 6 | 75 |
MIMAT0025680 | gga-miR-6588-3p | 2 | ......__ | 7 | 75 |
MIMAT0025679 | gga-miR-6587-3p | 1 | ......__ | 6 | 75 |
MIMAT0025432 | pol-miR-133-5p | 1 | _......_ | 6 | 75 |
MIMAT0025363 | ssc-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0025249 | ptc-miR6446 | 2 | ......__ | 7 | 75 |
MIMAT0025081 | mmu-miR-6338 | 1 | __...... | 6 | 75 |
MIMAT0024802 | hvu-miR6179 | 6 | __...... | 1 | 75 |
MIMAT0024615 | hsa-miR-6131 | 2 | _......_ | 7 | 75 |
MIMAT0024605 | ptr-miR-6131 | 2 | _......_ | 7 | 75 |
MIMAT0024125 | ggo-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0024098 | ggo-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0023918 | cgr-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0023764 | cgr-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0023653 | bna-miR6033 | 8 | __...... | 3 | 75 |
MIMAT0023480 | hco-miR-5973 | 3 | ......__ | 8 | 75 |
MIMAT0023187 | gma-miR5782 | 3 | _......_ | 8 | 75 |
MIMAT0022831 | sha-miR-363 | 3 | _......_ | 8 | 75 |
MIMAT0022818 | sha-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0022771 | sha-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0022580 | ola-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0022559 | ola-miR-133-5p | 2 | _......_ | 7 | 75 |
MIMAT0022554 | ola-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0021938 | aca-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0021757 | aca-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0021513 | asu-miR-279b-5p | 2 | __...... | 7 | 75 |
MIMAT0021497 | asu-miR-133-5p | 2 | __...... | 7 | 75 |
MIMAT0021204 | mtr-miR2592bg | 3 | _......_ | 8 | 75 |
MIMAT0021203 | mtr-miR2592bf | 3 | _......_ | 8 | 75 |
MIMAT0021202 | mtr-miR2592be | 3 | _......_ | 8 | 75 |
MIMAT0021201 | mtr-miR2592bd | 3 | _......_ | 8 | 75 |
MIMAT0021200 | mtr-miR2592bc | 3 | _......_ | 8 | 75 |
MIMAT0021199 | mtr-miR2592bb | 3 | _......_ | 8 | 75 |
MIMAT0021198 | mtr-miR2592ba | 3 | _......_ | 8 | 75 |
MIMAT0021197 | mtr-miR2592az | 3 | _......_ | 8 | 75 |
MIMAT0021196 | mtr-miR2592ay | 3 | _......_ | 8 | 75 |
MIMAT0021195 | mtr-miR2592ax | 3 | _......_ | 8 | 75 |
MIMAT0021194 | mtr-miR2592aw | 3 | _......_ | 8 | 75 |
MIMAT0021193 | mtr-miR2592av | 3 | _......_ | 8 | 75 |
MIMAT0021192 | mtr-miR2592au | 3 | _......_ | 8 | 75 |
MIMAT0021191 | mtr-miR2592at | 3 | _......_ | 8 | 75 |
MIMAT0021190 | mtr-miR2592as | 3 | _......_ | 8 | 75 |
MIMAT0021189 | mtr-miR2592ar | 3 | _......_ | 8 | 75 |
MIMAT0021188 | mtr-miR2592aq | 3 | _......_ | 8 | 75 |
MIMAT0021187 | mtr-miR2592ap | 3 | _......_ | 8 | 75 |
MIMAT0027079 | bdi-miR166g-5p | 2 | __...... | 7 | 75 |
MIMAT0020651 | rgl-miR5140 | 1 | _......_ | 6 | 75 |
MIMAT0019866 | hsa-miR-4738-5p | 6 | _......_ | 1 | 75 |
MIMAT0019853 | hsa-miR-4731-5p | 1 | ......__ | 6 | 75 |
MIMAT0019595 | pma-miR-4563 | 1 | ......__ | 6 | 75 |
MIMAT0019590 | pma-miR-4558 | 1 | ......__ | 6 | 75 |
MIMAT0019470 | pma-miR-138b | 2 | _......_ | 7 | 75 |
MIMAT0019469 | pma-miR-138a | 2 | _......_ | 7 | 75 |
MIMAT0019461 | pma-miR-133b-5p | 2 | _......_ | 7 | 75 |
MIMAT0019447 | pma-miR-125-3p | 2 | __...... | 7 | 75 |
MIMAT0019420 | pma-miR-29d-5p | 1 | __...... | 6 | 75 |
MIMAT0019069 | hsa-miR-4530 | 7 | ......__ | 2 | 75 |
MIMAT0018717 | tca-miR-316-3p | 6 | ......__ | 1 | 75 |
MIMAT0018121 | hsa-miR-3692-5p | 3 | ......__ | 8 | 75 |
MIMAT0018084 | hsa-miR-3663-5p | 1 | _......_ | 6 | 75 |
MIMAT0018013 | vvi-miR3625-5p | 8 | ......__ | 3 | 75 |
MIMAT0016851 | hsa-miR-4299 | 1 | _......_ | 6 | 75 |
MIMAT0016703 | cin-miR-4113-5p | 2 | __...... | 7 | 75 |
MIMAT0016570 | cin-miR-4040-3p | 7 | __...... | 2 | 75 |
MIMAT0016398 | cin-miR-15-3p | 1 | __...... | 6 | 75 |
MIMAT0017872 | rno-miR-133c | 3 | _......_ | 8 | 75 |
MIMAT0017861 | rno-miR-3575 | 3 | ......__ | 8 | 75 |
MIMAT0016162 | ppy-miR-1226 | 8 | _......_ | 3 | 75 |
MIMAT0015841 | ppy-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0015760 | ppy-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0015713 | ssc-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0015521 | bmo-miR-3334 | 8 | __...... | 3 | 75 |
MIMAT0014865 | mmu-miR-3078-3p | 2 | ......__ | 7 | 75 |
MIMAT0014794 | api-miR-3015c | 6 | __...... | 1 | 75 |
MIMAT0031064 | tgu-miR-29b-1-5p | 1 | __...... | 6 | 75 |
MIMAT0027005 | tgu-miR-133-5p | 2 | _......_ | 7 | 75 |
MIMAT0014542 | tgu-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0014515 | tgu-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0013036 | eca-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0012957 | eca-miR-1905b | 7 | _......_ | 2 | 75 |
MIMAT0012925 | eca-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0012716 | hvt-miR-H5-5p | 1 | _......_ | 6 | 75 |
MIMAT0012599 | bmo-miR-2723 | 6 | ......__ | 1 | 75 |
MIMAT0013540 | cte-miR-2688-5p | 3 | _......_ | 8 | 75 |
MIMAT0012491 | dsi-miR-992-5p | 3 | __...... | 8 | 75 |
MIMAT0012458 | dsi-miR-1000-3p | 2 | ......__ | 7 | 75 |
MIMAT0012266 | dps-miR-1000-3p | 2 | ......__ | 7 | 75 |
MIMAT0011956 | bta-miR-2400 | 6 | ......__ | 1 | 75 |
MIMAT0011700 | ppc-miR-2265 | 6 | __...... | 1 | 75 |
MIMAT0011613 | crm-miR-35c-5p | 3 | __...... | 8 | 75 |
MIMAT0015299 | ssc-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0010151 | mcv-miR-M1-3p | 3 | ......__ | 8 | 75 |
MIMAT0011163 | hsa-miR-548q | 1 | _......_ | 6 | 75 |
MIMAT0019178 | tca-bantam-5p | 1 | __...... | 6 | 75 |
MIMAT0019140 | bfl-miR-29b-5p | 2 | __...... | 7 | 75 |
MIMAT0009292 | bta-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0008106 | ptr-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0008034 | ptr-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0015278 | bmo-bantam-5p | 1 | __...... | 6 | 75 |
MIMAT0006739 | cfa-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0006654 | cfa-miR-138a | 2 | _......_ | 7 | 75 |
MIMAT0006646 | cfa-miR-138b | 2 | _......_ | 7 | 75 |
MIMAT0006644 | cfa-miR-1838 | 8 | _......_ | 3 | 75 |
MIMAT0006278 | mml-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0006194 | mml-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0026817 | mml-miR-133c-5p | 2 | _......_ | 7 | 75 |
MIMAT0007577 | gga-miR-1687-3p | 2 | ......__ | 7 | 75 |
MIMAT0007535 | gga-miR-1656 | 8 | _......_ | 3 | 75 |
MIMAT0007369 | gma-miR1511 | 6 | __...... | 1 | 75 |
MIMAT0015253 | cin-miR-92a-5p | 3 | _......_ | 8 | 75 |
MIMAT0007262 | oan-miR-1419e-5p | 2 | ......__ | 7 | 75 |
MIMAT0007240 | oan-miR-1419b-5p | 3 | ......__ | 8 | 75 |
MIMAT0007216 | oan-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0006996 | oan-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0006864 | oan-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0006808 | oan-miR-29b-5p | 1 | __...... | 6 | 75 |
MIMAT0005579 | mml-miR-1226 | 8 | _......_ | 3 | 75 |
MIMAT0005578 | ptr-miR-1226 | 8 | _......_ | 3 | 75 |
MIMAT0005577 | hsa-miR-1226-3p | 8 | _......_ | 3 | 75 |
MIMAT0005264 | smo-miR1107 | 3 | ......__ | 8 | 75 |
MIMAT0005110 | ppt-miR1024b | 2 | __...... | 7 | 75 |
MIMAT0005109 | ppt-miR1024a | 2 | __...... | 7 | 75 |
MIMAT0020900 | dme-miR-1000-3p | 2 | ......__ | 7 | 75 |
MIMAT0004250 | ath-miR832-5p | 1 | ......__ | 6 | 75 |
MIMAT0004136 | mdo-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0004111 | mdo-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0026665 | mdo-miR-133a-1-5p | 2 | _......_ | 7 | 75 |
MIMAT0003813 | bta-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0003712 | kshv-miR-K12-12-5p | 6 | __...... | 1 | 75 |
MIMAT0003665 | xtr-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0003599 | xtr-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0032012 | dre-miR-735-5p | 2 | _......_ | 7 | 75 |
MIMAT0017205 | rno-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0003080 | tni-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0003079 | fru-miR-138 | 2 | _......_ | 7 | 75 |
MIMAT0003008 | tni-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0003007 | fru-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0002188 | kshv-miR-K12-6-5p | 6 | ......__ | 1 | 75 |
MIMAT0001873 | dre-miR-338 | 7 | ......__ | 2 | 75 |
MIMAT0001835 | dre-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0031971 | dre-miR-133c-5p | 1 | _......_ | 6 | 75 |
MIMAT0003405 | dre-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0003404 | dre-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0031970 | dre-miR-133a-2-5p | 2 | _......_ | 7 | 75 |
MIMAT0026537 | gga-miR-133c-5p | 1 | _......_ | 6 | 75 |
MIMAT0026509 | gga-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0001122 | gga-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0000844 | rno-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0017124 | rno-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0004717 | rno-miR-29b-5p | 1 | __...... | 6 | 75 |
MIMAT0017083 | mmu-miR-133b-5p | 1 | _......_ | 6 | 75 |
MIMAT0000763 | hsa-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0017063 | mmu-miR-29b-2-5p | 1 | __...... | 6 | 75 |
MIMAT0000582 | mmu-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0000581 | rno-miR-338-3p | 7 | ......__ | 2 | 75 |
MIMAT0000430 | hsa-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0026478 | hsa-miR-133a-5p | 2 | _......_ | 7 | 75 |
MIMAT0000150 | mmu-miR-138-5p | 2 | _......_ | 7 | 75 |
MIMAT0003473 | mmu-miR-133a-5p | 1 | _......_ | 6 | 75 |
MIMAT0004515 | hsa-miR-29b-2-5p | 1 | __...... | 6 | 75 |