Result for your query miRNA sequence
>hbv-miR-b20-3p
ugcugguu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tgctggtt8
MIMAT0008291ptr-miR-6348........1100
MIMAT0003304hsa-miR-6348........1100
MIMAT0020303cel-miR-35-5p1........8100
MIMAT0033378str-miR-7880q-5p2_.......887
MIMAT0032914ppc-miR-133-5p1_.......787
MIMAT0031047mdo-miR-29b-2-5p1_.......787
MIMAT0024624mml-miR-61312_.......887
MIMAT0023885cgr-miR-29b-5p1_.......787
MIMAT0018828tca-miR-3868-5p7......._187
MIMAT0014456tgu-miR-29581......._787
MIMAT0031158hbv-miR-B20-3p2......._887
MIMAT0010049osa-miR2092-3p7......._187
MIMAT0009579lgi-miR-133-5p2_.......887
MIMAT0019116tca-miR-133-5p2_.......887
MIMAT0031079mml-miR-29b-2-5p2_.......887
MIMAT0026803mml-miR-29b-1-5p2_.......887
MIMAT0007593gga-miR-17012_.......887
MIMAT0007533gga-miR-16542......._887
MIMAT0004967cre-miR909.11......._787
MIMAT0026703mdo-miR-29b-1-5p1_.......787
MIMAT0031072gga-miR-29b-2-5p2_.......887
MIMAT0026488gga-miR-29b-1-5p2_.......887
MIMAT0020806dme-miR-133-5p2_.......887
MIMAT0004523mmu-miR-29b-1-5p1_.......787
MIMAT0004514hsa-miR-29b-1-5p1_.......787
MIMAT0034654eca-miR-70351.c......887
MIMAT0034516eca-miR-89791......c.887
MIMAT0034392cfa-miR-88881.a......887
MIMAT0028710mdo-miR-7349-5p1......a.887
MIMAT0028081mmu-miR-7087-3p1......c.887
MIMAT0025750gga-miR-6650-5p8......c.187
MIMAT0025706gga-miR-6611-5p1......a.887
MIMAT0024233ggo-miR-12871......a.887
MIMAT0022273hsa-miR-5580-5p1......c.887
MIMAT0021004gma-miR862a1......a.887
MIMAT0016210ppy-miR-12871......a.887
MIMAT0009971bta-miR-12871......a.887
MIMAT0005878hsa-miR-1287-5p1......a.887
MIMAT0004760mmu-miR-470-3p8.a......187
MIMAT0036926oha-miR-449a-3p6_......_175
MIMAT0036904oha-miR-338-3p7......__275
MIMAT0036880oha-miR-29b-2-5p1__......675
MIMAT0036878oha-miR-29b-1-5p1__......675
MIMAT0036710oha-miR-138-5p2_......_775
MIMAT0036703oha-miR-133a-3-5p1_......_675
MIMAT0036701oha-miR-133b-5p1_......_675
MIMAT0036700oha-miR-133a-2-5p2_......_775
MIMAT0036698oha-miR-133a-1-5p2_......_775
MIMAT0036150chi-miR-338-3p7......__275
MIMAT0036114chi-miR-29b-5p1__......675
MIMAT0035947chi-miR-133a-5p2_......_775
MIMAT0035863bra-miR6032-3p3......__875
MIMAT0035505bdi-miR94961__......675
MIMAT0035063efu-miR-138a2_......_775
MIMAT0035044efu-miR-133-5p2_......_775
MIMAT0035034efu-miR-138b2_......_775
MIMAT0034854efu-miR-92388......__375
MIMAT0034772efu-miR-91922__......775
MIMAT0034762eca-miR-91812......__775
MIMAT0034704eca-miR-19117_......_275
MIMAT0034478eca-miR-89497__......275
MIMAT0034460eca-miR-89323......__875
MIMAT0034457eca-miR-89291......__675
MIMAT0034294cfa-miR-88047......__275
MIMAT0034277pra-miR8788b-3p3_......_875
MIMAT0034275pra-miR8788a-3p3_......_875
MIMAT0034269pin-miR8788-3p3_......_875
MIMAT0033093ppc-miR-8290-5p2__......775
MIMAT0032747ssa-miR-8160-3p6......__175
MIMAT0032615ssa-miR-338a-3p7......__275
MIMAT0032583ssa-miR-29a-5p1__......675
MIMAT0032352ssa-miR-138-5p2_......_775
MIMAT0032341ssa-miR-133a-3-5p2_......_775
MIMAT0032339ssa-miR-133b-5p1_......_675
MIMAT0032337ssa-miR-133a-5p2_......_775
MIMAT0031664bbe-miR-29b-5p2__......775
MIMAT0031585bbe-miR-133-3p2_......_775
MIMAT0029954osa-miR1437b-3p2......__775
MIMAT0029653cbn-miR-75977__......275
MIMAT0029612crm-miR-75977__......275
MIMAT0029582cbr-miR-75817__......275
MIMAT0029538ipu-miR-16c6......__175
MIMAT0029502ipu-miR-3387......__275
MIMAT0029492ipu-miR-29c1__......675
MIMAT0029414ipu-miR-1382_......_775
MIMAT0031113mdo-miR-133a-2-5p2_......_775
MIMAT0028819mdo-miR-7381-3p2......__775
MIMAT0028759mdo-miR-7368-3p7_......_275
MIMAT0028280mml-miR-133d-5p2_......_775
MIMAT0028151ssc-miR-7138-5p8......__375
MIMAT0028150ssc-miR-7137-3p2_......_775
MIMAT0026291ccr-miR-3387......__275
MIMAT0026218ccr-miR-1382_......_775
MIMAT0026214ccr-miR-133a-5p2_......_775
MIMAT0027953mmu-miR-7024-3p6......__175
MIMAT0027599hsa-miR-6849-3p6_......_175
MIMAT0025749gga-miR-6649-3p1......__675
MIMAT0025738gga-miR-6641-3p2......__775
MIMAT0025686gga-miR-6593-5p1......__675
MIMAT0025680gga-miR-6588-3p2......__775
MIMAT0025679gga-miR-6587-3p1......__675
MIMAT0025432pol-miR-133-5p1_......_675
MIMAT0025363ssc-miR-1382_......_775
MIMAT0025249ptc-miR64462......__775
MIMAT0025081mmu-miR-63381__......675
MIMAT0024802hvu-miR61796__......175
MIMAT0024615hsa-miR-61312_......_775
MIMAT0024605ptr-miR-61312_......_775
MIMAT0024125ggo-miR-3387......__275
MIMAT0024098ggo-miR-1382_......_775
MIMAT0023918cgr-miR-3387......__275
MIMAT0023764cgr-miR-1382_......_775
MIMAT0023653bna-miR60338__......375
MIMAT0023480hco-miR-59733......__875
MIMAT0023187gma-miR57823_......_875
MIMAT0022831sha-miR-3633_......_875
MIMAT0022818sha-miR-3387......__275
MIMAT0022771sha-miR-1382_......_775
MIMAT0022580ola-miR-338-3p7......__275
MIMAT0022559ola-miR-133-5p2_......_775
MIMAT0022554ola-miR-1382_......_775
MIMAT0021938aca-miR-338-3p7......__275
MIMAT0021757aca-miR-138-5p2_......_775
MIMAT0021513asu-miR-279b-5p2__......775
MIMAT0021497asu-miR-133-5p2__......775
MIMAT0021204mtr-miR2592bg3_......_875
MIMAT0021203mtr-miR2592bf3_......_875
MIMAT0021202mtr-miR2592be3_......_875
MIMAT0021201mtr-miR2592bd3_......_875
MIMAT0021200mtr-miR2592bc3_......_875
MIMAT0021199mtr-miR2592bb3_......_875
MIMAT0021198mtr-miR2592ba3_......_875
MIMAT0021197mtr-miR2592az3_......_875
MIMAT0021196mtr-miR2592ay3_......_875
MIMAT0021195mtr-miR2592ax3_......_875
MIMAT0021194mtr-miR2592aw3_......_875
MIMAT0021193mtr-miR2592av3_......_875
MIMAT0021192mtr-miR2592au3_......_875
MIMAT0021191mtr-miR2592at3_......_875
MIMAT0021190mtr-miR2592as3_......_875
MIMAT0021189mtr-miR2592ar3_......_875
MIMAT0021188mtr-miR2592aq3_......_875
MIMAT0021187mtr-miR2592ap3_......_875
MIMAT0027079bdi-miR166g-5p2__......775
MIMAT0020651rgl-miR51401_......_675
MIMAT0019866hsa-miR-4738-5p6_......_175
MIMAT0019853hsa-miR-4731-5p1......__675
MIMAT0019595pma-miR-45631......__675
MIMAT0019590pma-miR-45581......__675
MIMAT0019470pma-miR-138b2_......_775
MIMAT0019469pma-miR-138a2_......_775
MIMAT0019461pma-miR-133b-5p2_......_775
MIMAT0019447pma-miR-125-3p2__......775
MIMAT0019420pma-miR-29d-5p1__......675
MIMAT0019069hsa-miR-45307......__275
MIMAT0018717tca-miR-316-3p6......__175
MIMAT0018121hsa-miR-3692-5p3......__875
MIMAT0018084hsa-miR-3663-5p1_......_675
MIMAT0018013vvi-miR3625-5p8......__375
MIMAT0016851hsa-miR-42991_......_675
MIMAT0016703cin-miR-4113-5p2__......775
MIMAT0016570cin-miR-4040-3p7__......275
MIMAT0016398cin-miR-15-3p1__......675
MIMAT0017872rno-miR-133c3_......_875
MIMAT0017861rno-miR-35753......__875
MIMAT0016162ppy-miR-12268_......_375
MIMAT0015841ppy-miR-338-3p7......__275
MIMAT0015760ppy-miR-1382_......_775
MIMAT0015713ssc-miR-3387......__275
MIMAT0015521bmo-miR-33348__......375
MIMAT0014865mmu-miR-3078-3p2......__775
MIMAT0014794api-miR-3015c6__......175
MIMAT0031064tgu-miR-29b-1-5p1__......675
MIMAT0027005tgu-miR-133-5p2_......_775
MIMAT0014542tgu-miR-338-3p7......__275
MIMAT0014515tgu-miR-138-5p2_......_775
MIMAT0013036eca-miR-338-3p7......__275
MIMAT0012957eca-miR-1905b7_......_275
MIMAT0012925eca-miR-1382_......_775
MIMAT0012716hvt-miR-H5-5p1_......_675
MIMAT0012599bmo-miR-27236......__175
MIMAT0013540cte-miR-2688-5p3_......_875
MIMAT0012491dsi-miR-992-5p3__......875
MIMAT0012458dsi-miR-1000-3p2......__775
MIMAT0012266dps-miR-1000-3p2......__775
MIMAT0011956bta-miR-24006......__175
MIMAT0011700ppc-miR-22656__......175
MIMAT0011613crm-miR-35c-5p3__......875
MIMAT0015299ssc-miR-133a-5p2_......_775
MIMAT0010151mcv-miR-M1-3p3......__875
MIMAT0011163hsa-miR-548q1_......_675
MIMAT0019178tca-bantam-5p1__......675
MIMAT0019140bfl-miR-29b-5p2__......775
MIMAT0009292bta-miR-3387......__275
MIMAT0008106ptr-miR-3387......__275
MIMAT0008034ptr-miR-1382_......_775
MIMAT0015278bmo-bantam-5p1__......675
MIMAT0006739cfa-miR-3387......__275
MIMAT0006654cfa-miR-138a2_......_775
MIMAT0006646cfa-miR-138b2_......_775
MIMAT0006644cfa-miR-18388_......_375
MIMAT0006278mml-miR-338-3p7......__275
MIMAT0006194mml-miR-138-5p2_......_775
MIMAT0026817mml-miR-133c-5p2_......_775
MIMAT0007577gga-miR-1687-3p2......__775
MIMAT0007535gga-miR-16568_......_375
MIMAT0007369gma-miR15116__......175
MIMAT0015253cin-miR-92a-5p3_......_875
MIMAT0007262oan-miR-1419e-5p2......__775
MIMAT0007240oan-miR-1419b-5p3......__875
MIMAT0007216oan-miR-138-5p2_......_775
MIMAT0006996oan-miR-133b-5p1_......_675
MIMAT0006864oan-miR-133a-5p2_......_775
MIMAT0006808oan-miR-29b-5p1__......675
MIMAT0005579mml-miR-12268_......_375
MIMAT0005578ptr-miR-12268_......_375
MIMAT0005577hsa-miR-1226-3p8_......_375
MIMAT0005264smo-miR11073......__875
MIMAT0005110ppt-miR1024b2__......775
MIMAT0005109ppt-miR1024a2__......775
MIMAT0020900dme-miR-1000-3p2......__775
MIMAT0004250ath-miR832-5p1......__675
MIMAT0004136mdo-miR-3387......__275
MIMAT0004111mdo-miR-1382_......_775
MIMAT0026665mdo-miR-133a-1-5p2_......_775
MIMAT0003813bta-miR-1382_......_775
MIMAT0003712kshv-miR-K12-12-5p6__......175
MIMAT0003665xtr-miR-3387......__275
MIMAT0003599xtr-miR-1382_......_775
MIMAT0032012dre-miR-735-5p2_......_775
MIMAT0017205rno-miR-133b-5p1_......_675
MIMAT0003080tni-miR-1382_......_775
MIMAT0003079fru-miR-1382_......_775
MIMAT0003008tni-miR-3387......__275
MIMAT0003007fru-miR-3387......__275
MIMAT0002188kshv-miR-K12-6-5p6......__175
MIMAT0001873dre-miR-3387......__275
MIMAT0001835dre-miR-138-5p2_......_775
MIMAT0031971dre-miR-133c-5p1_......_675
MIMAT0003405dre-miR-133b-5p1_......_675
MIMAT0003404dre-miR-133a-5p2_......_775
MIMAT0031970dre-miR-133a-2-5p2_......_775
MIMAT0026537gga-miR-133c-5p1_......_675
MIMAT0026509gga-miR-133a-5p2_......_775
MIMAT0001122gga-miR-138-5p2_......_775
MIMAT0000844rno-miR-138-5p2_......_775
MIMAT0017124rno-miR-133a-5p2_......_775
MIMAT0004717rno-miR-29b-5p1__......675
MIMAT0017083mmu-miR-133b-5p1_......_675
MIMAT0000763hsa-miR-338-3p7......__275
MIMAT0017063mmu-miR-29b-2-5p1__......675
MIMAT0000582mmu-miR-338-3p7......__275
MIMAT0000581rno-miR-338-3p7......__275
MIMAT0000430hsa-miR-138-5p2_......_775
MIMAT0026478hsa-miR-133a-5p2_......_775
MIMAT0000150mmu-miR-138-5p2_......_775
MIMAT0003473mmu-miR-133a-5p1_......_675
MIMAT0004515hsa-miR-29b-2-5p1__......675