| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tgggccg | 7 | ||
| MIMAT0034186 | gra-miR8757a | 1 | ....... | 7 | 100 |
| MIMAT0033232 | ppc-miR-8343-3p | 2 | ....... | 8 | 100 |
| MIMAT0029816 | mmu-miR-7655-5p | 7 | ....... | 1 | 100 |
| MIMAT0023700 | hsa-miR-6075 | 8 | ....... | 2 | 100 |
| MIMAT0009205 | ebv-miR-BART5-3p | 2 | ....... | 8 | 100 |
| MIMAT0036678 | oha-miR-128-5p | 3 | _...... | 8 | 85 |
| MIMAT0036296 | chi-miR-874-5p | 6 | _...... | 1 | 85 |
| MIMAT0035935 | chi-miR-1291 | 8 | ......_ | 3 | 85 |
| MIMAT0035933 | chi-miR-128-5p | 3 | _...... | 8 | 85 |
| MIMAT0035018 | efu-miR-9321 | 1 | ......_ | 6 | 85 |
| MIMAT0034600 | eca-miR-9056 | 3 | _...... | 8 | 85 |
| MIMAT0033114 | ppc-miR-8298-3p | 1 | ......_ | 6 | 85 |
| MIMAT0032979 | ppc-miR-8255-3p | 8 | ......_ | 3 | 85 |
| MIMAT0032896 | ppc-miR-8226-5p | 2 | _...... | 7 | 85 |
| MIMAT0032743 | ssa-miR-8159-3p | 2 | _...... | 7 | 85 |
| MIMAT0032317 | ssa-miR-128-4-5p | 3 | _...... | 8 | 85 |
| MIMAT0032316 | ssa-miR-128-3-5p | 3 | _...... | 8 | 85 |
| MIMAT0032315 | ssa-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0032313 | ssa-miR-128-1-5p | 3 | _...... | 8 | 85 |
| MIMAT0031706 | bbe-miR-4889b-3p | 8 | _...... | 3 | 85 |
| MIMAT0030772 | prd-miR-7939g-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030736 | prd-miR-7939j-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030652 | prd-miR-7939e-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030647 | prd-miR-7911a-3p | 3 | ......_ | 8 | 85 |
| MIMAT0030642 | prd-miR-7939d-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030640 | prd-miR-7939f-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030636 | prd-miR-7939i-5p | 3 | ......_ | 8 | 85 |
| MIMAT0030177 | bdi-miR7724b-3p | 8 | ......_ | 3 | 85 |
| MIMAT0030175 | bdi-miR7724a-3p | 8 | ......_ | 3 | 85 |
| MIMAT0028848 | mdo-miR-7386k-5p | 3 | ......_ | 8 | 85 |
| MIMAT0028608 | mdo-miR-128b-5p | 3 | _...... | 8 | 85 |
| MIMAT0028479 | mdo-miR-7256-3p | 1 | ......_ | 6 | 85 |
| MIMAT0028466 | mdo-miR-7250-5p | 8 | _...... | 3 | 85 |
| MIMAT0027654 | hsa-miR-6877-5p | 2 | _...... | 7 | 85 |
| MIMAT0027462 | hsa-miR-6781-5p | 2 | _...... | 7 | 85 |
| MIMAT0025473 | hsa-miR-6508-3p | 1 | ......_ | 6 | 85 |
| MIMAT0023749 | cgr-miR-128-5p | 3 | _...... | 8 | 85 |
| MIMAT0022370 | mmu-miR-5621-3p | 1 | ......_ | 6 | 85 |
| MIMAT0022305 | cel-miR-5592-5p | 6 | _...... | 1 | 85 |
| MIMAT0021732 | aca-miR-128-5p | 3 | _...... | 8 | 85 |
| MIMAT0020476 | bfl-miR-4889a | 7 | _...... | 2 | 85 |
| MIMAT0019699 | hsa-miR-4640-5p | 1 | ......_ | 6 | 85 |
| MIMAT0019579 | pma-miR-4547-3p | 6 | ......_ | 1 | 85 |
| MIMAT0018896 | tca-miR-193-5p | 1 | ......_ | 6 | 85 |
| MIMAT0018124 | pab-miR950-3p | 3 | ......_ | 8 | 85 |
| MIMAT0016235 | ppy-miR-1538 | 6 | _...... | 1 | 85 |
| MIMAT0031084 | tgu-miR-128-1-5p | 3 | _...... | 8 | 85 |
| MIMAT0026977 | tgu-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0014491 | tgu-miR-2981 | 3 | _...... | 8 | 85 |
| MIMAT0012170 | hbv-miR-B2RC | 7 | _...... | 2 | 85 |
| MIMAT0012010 | bta-miR-2284r | 8 | ......_ | 3 | 85 |
| MIMAT0026910 | mml-miR-874-5p | 6 | _...... | 1 | 85 |
| MIMAT0026814 | mml-miR-128b-5p | 3 | _...... | 8 | 85 |
| MIMAT0007470 | gga-miR-1604 | 1 | ......_ | 6 | 85 |
| MIMAT0007470 | gga-miR-1604 | 8 | ......_ | 3 | 85 |
| MIMAT0007400 | hsa-miR-1538 | 6 | _...... | 1 | 85 |
| MIMAT0005398 | cre-miR1153-5p.1 | 1 | ......_ | 6 | 85 |
| MIMAT0017290 | rno-miR-874-5p | 6 | _...... | 1 | 85 |
| MIMAT0026718 | hsa-miR-874-5p | 6 | _...... | 1 | 85 |
| MIMAT0017268 | mmu-miR-874-5p | 6 | _...... | 1 | 85 |
| MIMAT0026662 | mdo-miR-128a-5p | 3 | _...... | 8 | 85 |
| MIMAT0003891 | mmu-miR-770-3p | 3 | ......_ | 8 | 85 |
| MIMAT0019087 | rlcv-miR-rL1-8-3p | 3 | ......_ | 8 | 85 |
| MIMAT0019086 | rlcv-miR-rL1-7-3p | 3 | ......_ | 8 | 85 |
| MIMAT0026565 | mml-miR-128a-5p | 3 | _...... | 8 | 85 |
| MIMAT0031967 | dre-miR-128-5p | 3 | _...... | 8 | 85 |
| MIMAT0031096 | gga-miR-128-1-5p | 3 | _...... | 8 | 85 |
| MIMAT0026506 | gga-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0017119 | rno-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0017118 | rno-miR-128-1-5p | 3 | _...... | 8 | 85 |
| MIMAT0031095 | hsa-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0017069 | mmu-miR-128-2-5p | 3 | _...... | 8 | 85 |
| MIMAT0026477 | hsa-miR-128-1-5p | 3 | _...... | 8 | 85 |
| MIMAT0016982 | mmu-miR-128-1-5p | 3 | _...... | 8 | 85 |
