Result for your query miRNA sequence
>rrv-miR-rr1-3-5p
uguuuag

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tgtttag7
MIMAT0036392gma-miR97581.......7100
MIMAT0028987oan-miR-7419-3p1.......7100
MIMAT0028189dev-miR-D16-3p7.......1100
MIMAT0032121gma-miR5035-3p1.......7100
MIMAT0015794ppy-miR-199b-5p2.......8100
MIMAT0017626aly-miR840-3p2.......8100
MIMAT0009211osa-miR1850.32.......8100
MIMAT0032021ath-miR840-3p2.......8100
MIMAT0037050ssc-miR-9832-3p1_......685
MIMAT0036968gra-miR827b3......_885
MIMAT0036895oha-miR-30d-5p8......_385
MIMAT0036892oha-miR-30c-5p8......_385
MIMAT0036890oha-miR-30b-5p8......_385
MIMAT0036888oha-miR-30a-5p8......_385
MIMAT0036886oha-miR-30e-5p8......_385
MIMAT0036585tch-miR-30c-5p8......_385
MIMAT0036562tch-miR-30a-5p8......_385
MIMAT0036503tch-miR-30b-5p8......_385
MIMAT0036130chi-miR-30f-5p8......_385
MIMAT0036128chi-miR-30e-5p8......_385
MIMAT0036125chi-miR-30c-5p8......_385
MIMAT0036123chi-miR-30b-5p8......_385
MIMAT0036121chi-miR-30a-5p8......_385
MIMAT0035693bra-miR9567-5p6......_185
MIMAT0035633dvi-miR-9541-3p1_......685
MIMAT0035192efu-miR-30b8......_385
MIMAT0034264gra-miR8639e6......_185
MIMAT0034263gra-miR8639d6......_185
MIMAT0033995gra-miR8639i6......_185
MIMAT0033994gra-miR8639h6......_185
MIMAT0033993gra-miR8639g6......_185
MIMAT0033992gra-miR8639f6......_185
MIMAT0033991gra-miR8639c6......_185
MIMAT0033990gra-miR8639b6......_185
MIMAT0033989gra-miR8639a6......_185
MIMAT0032611ssa-miR-30e-5p8......_385
MIMAT0032608ssa-miR-30d-5p8......_385
MIMAT0032606ssa-miR-30c-5p8......_385
MIMAT0032604ssa-miR-30b-5p8......_385
MIMAT0032600ssa-miR-30a-5p8......_385
MIMAT0030583prd-miR-7896-3p8_......385
MIMAT0030059oar-miR-30d8......_385
MIMAT0030058oar-miR-30c8......_385
MIMAT0030057oar-miR-30b8......_385
MIMAT0030055oar-miR-30a-5p8......_385
MIMAT0029498ipu-miR-30c8......_385
MIMAT0029497ipu-miR-30b8......_385
MIMAT0028847mdo-miR-7386j-3p8......_385
MIMAT0028622mdo-miR-30d-5p8......_385
MIMAT0028550mdo-miR-30b-5p8......_385
MIMAT0028502mdo-miR-30c-5p8......_385
MIMAT0028271mml-miR-7168-3p3......_885
MIMAT0026290ccr-miR-30d8......_385
MIMAT0026289ccr-miR-30b8......_385
MIMAT0025411tgu-miR-30e8......_385
MIMAT0024124ggo-miR-30e8......_385
MIMAT0024111ggo-miR-30c8......_385
MIMAT0023948cgr-miR-384-5p8......_385
MIMAT0023900cgr-miR-30e-5p8......_385
MIMAT0023898cgr-miR-30c8......_385
MIMAT0023896cgr-miR-30b-5p8......_385
MIMAT0023894cgr-miR-30a-5p8......_385
MIMAT0023491hco-miR-59811......_685
MIMAT0023487hco-miR-59773......_885
MIMAT0022808sha-miR-30c8......_385
MIMAT0022807sha-miR-30e8......_385
MIMAT0022666ola-miR-30a-5p8......_385
MIMAT0022599ola-miR-30d-5p8......_385
MIMAT0022598ola-miR-30c8......_385
MIMAT0021928aca-miR-30e-5p8......_385
MIMAT0021926aca-miR-30d-5p8......_385
MIMAT0021924aca-miR-30c-5p8......_385
MIMAT0021922aca-miR-30b-5p8......_385
MIMAT0021920aca-miR-30a-5p8......_385
MIMAT0021362mtr-miR5294c7_......285
MIMAT0021361mtr-miR5294b7_......285
MIMAT0021360mtr-miR5294a7_......285
MIMAT0019609pma-miR-45763......_885
MIMAT0019431pma-miR-30g8......_385
MIMAT0019430pma-miR-30f8......_385
MIMAT0019428pma-miR-30e-5p8......_385
MIMAT0019427pma-miR-30d8......_385
MIMAT0019425pma-miR-30c-5p8......_385
MIMAT0019424pma-miR-30b8......_385
MIMAT0019422pma-miR-30a-5p8......_385
MIMAT0018720tca-miR-3838-5p1_......685
MIMAT0018133pab-miR37016......_185
MIMAT0018056dme-miR-3641-3p7_......285
MIMAT0016823cin-miR-4203-3p6......_185
MIMAT0015739ppy-miR-30e8......_385
MIMAT0015738ppy-miR-30d8......_385
MIMAT0015737ppy-miR-30c8......_385
MIMAT0015736ppy-miR-30b8......_385
MIMAT0015492bmo-miR-3304a6......_185
MIMAT0015457bmo-miR-32726......_185
MIMAT0014657tgu-miR-30d-5p8......_385
MIMAT0014637tgu-miR-30a-5p8......_385
MIMAT0014521tgu-miR-30c-5p8......_385
MIMAT0014506tgu-miR-30b-5p8......_385
MIMAT0013872ssc-miR-30e-5p8......_385
MIMAT0013871ssc-miR-30d8......_385
MIMAT0013006eca-miR-30d8......_385
MIMAT0013005eca-miR-30b8......_385
MIMAT0012916eca-miR-30e8......_385
MIMAT0012915eca-miR-30c8......_385
MIMAT0012873hvt-miR-H17-3p6......_185
MIMAT0013454mtr-miR2655o2_......785
MIMAT0013453mtr-miR2655n2_......785
MIMAT0013452mtr-miR2655m2_......785
MIMAT0013451mtr-miR2655l2_......785
MIMAT0013450mtr-miR2655k2_......785
MIMAT0013449mtr-miR2655j2_......785
MIMAT0013448mtr-miR2655i2_......785
MIMAT0013447mtr-miR2655h2_......785
MIMAT0013446mtr-miR2655g2_......785
MIMAT0013445mtr-miR2655f2_......785
MIMAT0013444mtr-miR2655e2_......785
MIMAT0013443mtr-miR2655d2_......785
MIMAT0013442mtr-miR2655c2_......785
MIMAT0013440mtr-miR2655a2_......785
MIMAT0012501dsi-miR-9756......_185
MIMAT0010193ssc-miR-30a-5p8......_385
MIMAT0009282bta-miR-30f8......_385
MIMAT0008092ptr-miR-30e8......_385
MIMAT0007756ssc-miR-30b-5p8......_385
MIMAT0006617cfa-miR-30b8......_385
MIMAT0006616cfa-miR-30d8......_385
MIMAT0006605cfa-miR-30c8......_385
MIMAT0006604cfa-miR-30a8......_385
MIMAT0006172mml-miR-30e-5p8......_385
MIMAT0006171mml-miR-30d-5p8......_385
MIMAT0006170mml-miR-30c-5p8......_385
MIMAT0015257cin-miR-124-2-5p3......_885
MIMAT0007203oan-miR-30e-5p8......_385
MIMAT0007117oan-miR-1380-3p1_......685
MIMAT0007043oan-miR-30b-5p8......_385
MIMAT0007041oan-miR-30d-5p8......_385
MIMAT0007037oan-miR-30f8......_385
MIMAT0006913oan-miR-30a-5p8......_385
MIMAT0006911oan-miR-30c-5p8......_385
MIMAT0005309rno-miR-384-5p8......_385
MIMAT0005491dme-miR-975-5p6......_185
MIMAT0004093mdo-miR-30a-5p8......_385
MIMAT0003850bta-miR-30c8......_385
MIMAT0003841bta-miR-30a-5p8......_385
MIMAT0003799bta-miR-30e-5p8......_385
MIMAT0003678xtr-miR-30e8......_385
MIMAT0003657xtr-miR-30d8......_385
MIMAT0003577xtr-miR-30c8......_385
MIMAT0003576xtr-miR-30b8......_385
MIMAT0003574xtr-miR-30a-5p8......_385
MIMAT0003547bta-miR-30b-5p8......_385
MIMAT0003533bta-miR-30d8......_385
MIMAT0003023tni-miR-30c8......_385
MIMAT0003022fru-miR-30c8......_385
MIMAT0002950tni-miR-30d8......_385
MIMAT0002949fru-miR-30d8......_385
MIMAT0002948tni-miR-30b8......_385
MIMAT0002947fru-miR-30b8......_385
MIMAT0002620ppa-miR-30d8......_385
MIMAT0002619mne-miR-30d8......_385
MIMAT0002618ggo-miR-30d8......_385
MIMAT0002617ptr-miR-30d8......_385
MIMAT0002616mne-miR-30c8......_385
MIMAT0002615lla-miR-30c8......_385
MIMAT0002614ptr-miR-30c8......_385
MIMAT0002377ppa-miR-30a-5p8......_385
MIMAT0002375ppy-miR-30a-5p8......_385
MIMAT0002373ggo-miR-30a-5p8......_385
MIMAT0002371ptr-miR-30a-5p8......_385
MIMAT0002369mml-miR-30a-5p8......_385
MIMAT0002219ppa-miR-30b8......_385
MIMAT0002218age-miR-30b8......_385
MIMAT0002217mne-miR-30b8......_385
MIMAT0002216lla-miR-30b8......_385
MIMAT0002215ggo-miR-30b8......_385
MIMAT0002214ptr-miR-30b8......_385
MIMAT0002213mml-miR-30b-5p8......_385
MIMAT0002191kshv-miR-K12-4-5p8_......385
MIMAT0002167ssc-miR-30c-5p8......_385
MIMAT0001807dre-miR-30e-5p8......_385
MIMAT0001806dre-miR-30d8......_385
MIMAT0001805dre-miR-30c-5p8......_385
MIMAT0001804dre-miR-30b8......_385
MIMAT0001803dre-miR-30a-5p8......_385
MIMAT0001177gga-miR-30e-5p8......_385
MIMAT0001137gga-miR-30c-5p8......_385
MIMAT0001135gga-miR-30a-5p8......_385
MIMAT0001130gga-miR-30b-5p8......_385
MIMAT0001129gga-miR-30d8......_385
MIMAT0004745mmu-miR-384-5p8......_385
MIMAT0000808rno-miR-30a-5p8......_385
MIMAT0000807rno-miR-30d-5p8......_385
MIMAT0000806rno-miR-30b-5p8......_385
MIMAT0000805rno-miR-30e-5p8......_385
MIMAT0000804rno-miR-30c-5p8......_385
MIMAT0000692hsa-miR-30e-5p8......_385
MIMAT0000515mmu-miR-30d-5p8......_385
MIMAT0000514mmu-miR-30c-5p8......_385
MIMAT0000420hsa-miR-30b-5p8......_385
MIMAT0000248mmu-miR-30e-5p8......_385
MIMAT0000245hsa-miR-30d-5p8......_385
MIMAT0000244hsa-miR-30c-5p8......_385
MIMAT0000130mmu-miR-30b-5p8......_385
MIMAT0000128mmu-miR-30a-5p8......_385
MIMAT0000087hsa-miR-30a-5p8......_385