RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | ttacaaag | 8 | ||
MIMAT0010132 | ebv-miR-BART22 | 1 | ........ | 8 | 100 |
MIMAT0036452 | ppy-miR-520i | 2 | _....... | 8 | 87 |
MIMAT0036423 | ggo-miR-524-5p | 2 | _....... | 8 | 87 |
MIMAT0035659 | bra-miR9553-5p | 1 | _....... | 7 | 87 |
MIMAT0033896 | atr-miR8607 | 7 | ......._ | 1 | 87 |
MIMAT0033706 | pxy-miR-8496 | 8 | ......._ | 2 | 87 |
MIMAT0029780 | cbn-miR-85 | 1 | _....... | 7 | 87 |
MIMAT0028778 | mdo-miR-7371c-5p | 7 | _....... | 1 | 87 |
MIMAT0024352 | mml-miR-1283 | 2 | _....... | 8 | 87 |
MIMAT0020458 | bfl-miR-4875d-3p | 1 | _....... | 7 | 87 |
MIMAT0015980 | ppy-miR-524-5p | 2 | _....... | 8 | 87 |
MIMAT0015971 | ppy-miR-520d-5p | 2 | _....... | 8 | 87 |
MIMAT0015477 | bmo-miR-3290 | 7 | ......._ | 1 | 87 |
MIMAT0014774 | api-miR-3037 | 1 | ......._ | 7 | 87 |
MIMAT0012777 | mml-miR-524-5p | 2 | _....... | 8 | 87 |
MIMAT0011531 | crm-miR-85 | 1 | _....... | 7 | 87 |
MIMAT0006377 | mml-miR-518a-5p | 2 | _....... | 8 | 87 |
MIMAT0002855 | hsa-miR-520d-5p | 2 | _....... | 8 | 87 |
MIMAT0002849 | hsa-miR-524-5p | 2 | _....... | 8 | 87 |
MIMAT0000490 | cbr-miR-85 | 1 | _....... | 7 | 87 |
MIMAT0000058 | cel-miR-85-3p | 1 | _....... | 7 | 87 |
MIMAT0029870 | mmu-miR-7678-5p | 1 | ......g. | 8 | 87 |
MIMAT0025254 | ptc-miR6450a | 8 | .g...... | 1 | 87 |
MIMAT0022146 | osa-miR5513 | 1 | .a...... | 8 | 87 |
MIMAT0020193 | dme-miR-4967-3p | 1 | .a...... | 8 | 87 |
MIMAT0002069 | ptc-miR475c | 1 | ......t. | 8 | 87 |
MIMAT0036434 | ggo-miR-520g | 1 | __...... | 6 | 75 |
MIMAT0035701 | bra-miR158-5p | 6 | __...... | 1 | 75 |
MIMAT0035376 | nve-miR-9420 | 2 | _......_ | 7 | 75 |
MIMAT0034234 | gra-miR7484m | 6 | _......_ | 1 | 75 |
MIMAT0034233 | gra-miR8783 | 6 | _......_ | 1 | 75 |
MIMAT0033419 | str-miR-8381-3p | 7 | _......_ | 2 | 75 |
MIMAT0033237 | ppc-miR-8345-3p | 7 | _......_ | 2 | 75 |
MIMAT0033235 | ppc-miR-8344-3p | 6 | _......_ | 1 | 75 |
MIMAT0032902 | ppc-miR-8229a-5p | 6 | __...... | 1 | 75 |
MIMAT0032752 | ssa-miR-7552a-5p | 1 | ......__ | 6 | 75 |
MIMAT0032741 | ssa-miR-8158-3p | 6 | _......_ | 1 | 75 |
MIMAT0031742 | bma-miR-239 | 6 | _......_ | 1 | 75 |
MIMAT0031697 | bbe-miR-4874-5p | 8 | _......_ | 3 | 75 |
MIMAT0030841 | prd-miR-7969-3p | 1 | __...... | 6 | 75 |
MIMAT0030831 | prd-miR-7965-3p | 7 | _......_ | 2 | 75 |
MIMAT0030799 | prd-miR-7956-3p | 6 | _......_ | 1 | 75 |
MIMAT0030279 | bdi-miR7765-3p | 1 | ......__ | 6 | 75 |
MIMAT0030276 | bdi-miR7708b-5p | 3 | ......__ | 8 | 75 |
MIMAT0029730 | cbn-miR-239d | 6 | _......_ | 1 | 75 |
MIMAT0029729 | cbn-miR-239c | 6 | _......_ | 1 | 75 |
MIMAT0029728 | cbn-miR-239a | 6 | _......_ | 1 | 75 |
MIMAT0029727 | cbn-miR-239b | 6 | _......_ | 1 | 75 |
MIMAT0029726 | cbn-miR-238 | 6 | _......_ | 1 | 75 |
MIMAT0029641 | crm-miR-2254 | 6 | _......_ | 1 | 75 |
MIMAT0029125 | ghr-miR7484b | 6 | _......_ | 1 | 75 |
MIMAT0029124 | ghr-miR7484a | 6 | _......_ | 1 | 75 |
MIMAT0028947 | oan-miR-7402-3p | 8 | ......__ | 3 | 75 |
MIMAT0028876 | mdo-miR-7390-5p | 7 | _......_ | 2 | 75 |
MIMAT0028788 | mdo-miR-7371h-5p | 7 | _......_ | 2 | 75 |
MIMAT0028784 | mdo-miR-7371f-5p | 6 | _......_ | 1 | 75 |
MIMAT0028782 | mdo-miR-7371e-5p | 6 | _......_ | 1 | 75 |
MIMAT0028780 | mdo-miR-7371d-5p | 8 | _......_ | 3 | 75 |
MIMAT0028774 | mdo-miR-7371b-5p | 6 | _......_ | 1 | 75 |
MIMAT0028772 | mdo-miR-7371a-5p | 6 | _......_ | 1 | 75 |
MIMAT0028366 | mml-miR-7201-5p | 1 | __...... | 6 | 75 |
MIMAT0026343 | bma-miR-5845 | 8 | _......_ | 3 | 75 |
MIMAT0027890 | mmu-miR-6994-5p | 1 | __...... | 6 | 75 |
MIMAT0027692 | mmu-miR-6896-5p | 6 | _......_ | 1 | 75 |
MIMAT0027589 | hsa-miR-6844 | 8 | __...... | 3 | 75 |
MIMAT0025264 | ptc-miR6454 | 7 | ......__ | 2 | 75 |
MIMAT0024056 | ptr-miR-3149 | 6 | _......_ | 1 | 75 |
MIMAT0023524 | ath-miR5014b | 7 | _......_ | 2 | 75 |
MIMAT0023523 | ath-miR4245 | 1 | __...... | 6 | 75 |
MIMAT0023380 | hco-miR-5897c | 7 | _......_ | 2 | 75 |
MIMAT0023364 | hco-miR-5897b | 7 | _......_ | 2 | 75 |
MIMAT0023341 | hco-miR-5897a | 7 | _......_ | 2 | 75 |
MIMAT0023332 | hco-miR-5893 | 1 | _......_ | 6 | 75 |
MIMAT0023128 | mtr-miR5748 | 1 | __...... | 6 | 75 |
MIMAT0023114 | tur-miR-305-5p | 6 | _......_ | 1 | 75 |
MIMAT0023090 | tur-miR-3931-5p | 7 | _......_ | 2 | 75 |
MIMAT0022377 | mmu-miR-5624-5p | 8 | ......__ | 3 | 75 |
MIMAT0022111 | pti-miR5478 | 2 | __...... | 7 | 75 |
MIMAT0021521 | asu-miR-239-5p | 6 | _......_ | 1 | 75 |
MIMAT0021260 | mtr-miR5260 | 6 | _......_ | 1 | 75 |
MIMAT0021184 | mtr-miR5226 | 6 | _......_ | 1 | 75 |
MIMAT0020565 | bdi-miR1878-3p | 7 | _......_ | 2 | 75 |
MIMAT0020142 | cel-miR-4936 | 8 | __...... | 3 | 75 |
MIMAT0020503 | dme-miR-4910-5p | 7 | _......_ | 2 | 75 |
MIMAT0020453 | bfl-miR-4874-5p | 8 | _......_ | 3 | 75 |
MIMAT0019358 | hsa-miR-3973 | 1 | __...... | 6 | 75 |
MIMAT0018347 | ath-miR3932b-3p | 8 | __...... | 3 | 75 |
MIMAT0018346 | ath-miR3932a | 8 | __...... | 3 | 75 |
MIMAT0018924 | dpu-miR-305 | 6 | _......_ | 1 | 75 |
MIMAT0017934 | aly-miR4245 | 1 | __...... | 6 | 75 |
MIMAT0016772 | cin-miR-4164-3p | 7 | __...... | 2 | 75 |
MIMAT0016539 | cin-miR-4024-5p | 6 | _......_ | 1 | 75 |
MIMAT0016475 | cin-miR-4006c-3p | 8 | __...... | 3 | 75 |
MIMAT0016289 | sja-miR-3484-3p | 2 | _......_ | 7 | 75 |
MIMAT0016204 | ppy-miR-1283a | 3 | _......_ | 8 | 75 |
MIMAT0015976 | ppy-miR-520h | 1 | __...... | 6 | 75 |
MIMAT0015975 | ppy-miR-520g | 1 | __...... | 6 | 75 |
MIMAT0017644 | aly-miR857-3p | 7 | _......_ | 2 | 75 |
MIMAT0017421 | aly-miR158a-5p | 6 | __...... | 1 | 75 |
MIMAT0015022 | hsa-miR-3149 | 6 | _......_ | 1 | 75 |
MIMAT0013744 | bmo-miR-2831 | 1 | _......_ | 6 | 75 |
MIMAT0013723 | bmo-miR-2814 | 1 | _......_ | 6 | 75 |
MIMAT0012071 | bta-miR-2479 | 8 | _......_ | 3 | 75 |
MIMAT0011676 | ppc-miR-2254 | 6 | _......_ | 1 | 75 |
MIMAT0011646 | ppc-miR-239 | 6 | _......_ | 1 | 75 |
MIMAT0011616 | crm-miR-239a-5p | 6 | _......_ | 1 | 75 |
MIMAT0011536 | crm-miR-239b | 6 | _......_ | 1 | 75 |
MIMAT0011520 | crm-miR-238 | 6 | _......_ | 1 | 75 |
MIMAT0011492 | cbr-miR-2223 | 6 | _......_ | 1 | 75 |
MIMAT0011465 | cbr-miR-238 | 6 | _......_ | 1 | 75 |
MIMAT0010063 | osa-miR2099-3p | 1 | __...... | 6 | 75 |
MIMAT0008204 | ptr-miR-520h | 1 | __...... | 6 | 75 |
MIMAT0008203 | ptr-miR-520g | 1 | __...... | 6 | 75 |
MIMAT0008002 | ptr-miR-1283a | 3 | _......_ | 8 | 75 |
MIMAT0006395 | mml-miR-520g | 1 | __...... | 6 | 75 |
MIMAT0005750 | age-miR-513e | 1 | ......__ | 6 | 75 |
MIMAT0005401 | cre-miR1153-3p.1 | 8 | ......__ | 3 | 75 |
MIMAT0005400 | cre-miR1153-3p.2 | 6 | ......__ | 1 | 75 |
MIMAT0005269 | smo-miR1112-5p | 7 | __...... | 2 | 75 |
MIMAT0004471 | mdv2-miR-M26-5p | 8 | __...... | 3 | 75 |
MIMAT0004301 | ath-miR857 | 7 | _......_ | 2 | 75 |
MIMAT0005799 | hsa-miR-1283 | 3 | _......_ | 8 | 75 |
MIMAT0002867 | hsa-miR-520h | 1 | __...... | 6 | 75 |
MIMAT0002858 | hsa-miR-520g-3p | 1 | __...... | 6 | 75 |
MIMAT0001304 | cbr-miR-239a | 6 | _......_ | 1 | 75 |
MIMAT0000767 | cbr-lsy-6 | 7 | _......_ | 2 | 75 |
MIMAT0000749 | cel-lsy-6-3p | 7 | _......_ | 2 | 75 |
MIMAT0000295 | cel-miR-239b-5p | 6 | _......_ | 1 | 75 |
MIMAT0000294 | cel-miR-239a-5p | 6 | _......_ | 1 | 75 |
MIMAT0000293 | cel-miR-238-3p | 6 | _......_ | 1 | 75 |
MIMAT0031873 | ath-miR158a-5p | 6 | __...... | 1 | 75 |