VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>tumv-miR-s44
uuagcac

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`ttagcac`	7
MIMAT0022010	aca-miR-5400	1	`.......`	7	100
MIMAT0018815	tca-miR-3865-3p	1	`.......`	7	100
MIMAT0014490	tgu-miR-2980	1	`.......`	7	100
MIMAT0017223	rno-miR-374-3p	2	`.......`	8	100
MIMAT0037256	ata-miR9674b-5p	7	`_......`	2	85
MIMAT0037195	ata-miR9674c-3p	7	`_......`	2	85
MIMAT0036879	oha-miR-29b-3p	1	`_......`	6	85
MIMAT0036877	oha-miR-29a-3p	1	`_......`	6	85
MIMAT0036546	tch-miR-29c-3p	1	`_......`	6	85
MIMAT0036511	tch-miR-29a-3p	1	`_......`	6	85
MIMAT0036494	tch-miR-29b-3p	1	`_......`	6	85
MIMAT0036117	chi-miR-29c-3p	1	`_......`	6	85
MIMAT0036115	chi-miR-29b-3p	1	`_......`	6	85
MIMAT0036113	chi-miR-29a-3p	1	`_......`	6	85
MIMAT0035613	dvi-miR-998-3p	1	`_......`	6	85
MIMAT0035609	dvi-miR-995-3p	1	`_......`	6	85
MIMAT0035176	efu-miR-29a	2	`_......`	7	85
MIMAT0035175	efu-miR-29b	2	`_......`	7	85
MIMAT0034941	efu-miR-29c	2	`_......`	7	85
MIMAT0034604	eca-miR-9059	3	`......_`	8	85
MIMAT0034433	cfa-miR-8908c	3	`......_`	8	85
MIMAT0034304	cfa-miR-8814	1	`......_`	6	85
MIMAT0034153	gra-miR8741	1	`_......`	6	85
MIMAT0032887	ppc-miR-83-3p	1	`_......`	6	85
MIMAT0032736	ssa-miR-8157-5p	1	`_......`	6	85
MIMAT0032591	ssa-miR-29c-3p	1	`_......`	6	85
MIMAT0032586	ssa-miR-29b-3p	1	`_......`	6	85
MIMAT0032584	ssa-miR-29a-3p	1	`_......`	6	85
MIMAT0031758	bma-miR-5366	1	`......_`	6	85
MIMAT0031690	bbe-miR-4866-3p	3	`......_`	8	85
MIMAT0031665	bbe-miR-29b-3p	1	`_......`	6	85
MIMAT0031663	bbe-miR-29a-3p	1	`_......`	6	85
MIMAT0031657	bbe-miR-252b-5p	6	`......_`	1	85
MIMAT0030741	prd-miR-49-3p	1	`_......`	6	85
MIMAT0030054	oar-miR-29b	1	`_......`	6	85
MIMAT0032196	lva-miR-29b-3p	1	`_......`	6	85
MIMAT0032146	pmi-miR-29b-3p	1	`_......`	6	85
MIMAT0029746	cbn-miR-83	1	`_......`	6	85
MIMAT0031149	aja-miR-29c	1	`_......`	6	85
MIMAT0031135	aja-miR-29b	1	`_......`	6	85
MIMAT0028590	mdo-miR-7299-5p	8	`_......`	3	85
MIMAT0028512	mdo-miR-7271-5p	3	`......_`	8	85
MIMAT0026287	ccr-miR-29b	1	`_......`	6	85
MIMAT0026286	ccr-miR-29a	1	`_......`	6	85
MIMAT0025864	blv-miR-B4-3p	1	`_......`	6	85
MIMAT0025100	mmu-miR-6357	1	`_......`	6	85
MIMAT0025088	mmu-miR-6345	1	`_......`	6	85
MIMAT0025001	hme-miR-998	1	`_......`	6	85
MIMAT0024970	hme-miR-285	1	`_......`	6	85
MIMAT0024436	mse-miR-285	1	`_......`	6	85
MIMAT0024423	mse-miR-998	1	`_......`	6	85
MIMAT0024084	ggo-miR-29c	1	`_......`	6	85
MIMAT0023888	cgr-miR-29c-3p	1	`_......`	6	85
MIMAT0023886	cgr-miR-29b-3p	1	`_......`	6	85
MIMAT0023884	cgr-miR-29a-3p	1	`_......`	6	85
MIMAT0023594	sly-miR6024	3	`......_`	8	85
MIMAT0023593	stu-miR6024-3p	3	`......_`	8	85
MIMAT0023355	hco-miR-83	1	`_......`	6	85
MIMAT0022656	ola-miR-29c	1	`_......`	6	85
MIMAT0022569	ola-miR-29b	1	`_......`	6	85
MIMAT0022470	hsa-miR-5682	2	`_......`	7	85
MIMAT0021914	aca-miR-29b	1	`_......`	6	85
MIMAT0021912	aca-miR-29a-3p	1	`_......`	6	85
MIMAT0021595	asu-miR-5366-3p	1	`......_`	6	85
MIMAT0021476	asu-miR-83-3p	1	`_......`	6	85
MIMAT0021214	mtr-miR5229b	1	`......_`	6	85
MIMAT0021213	mtr-miR5229a	1	`......_`	6	85
MIMAT0020611	mmu-miR-5104	8	`_......`	3	85
MIMAT0020067	spu-miR-29b	1	`_......`	6	85
MIMAT0019600	pma-miR-4568	1	`_......`	6	85
MIMAT0019421	pma-miR-29d-3p	1	`_......`	6	85
MIMAT0019419	pma-miR-29c	1	`_......`	6	85
MIMAT0019418	pma-miR-29b	1	`_......`	6	85
MIMAT0019417	pma-miR-29a-3p	1	`_......`	6	85
MIMAT0018401	ngi-miR-29b	1	`_......`	6	85
MIMAT0018853	tca-miR-998-3p	1	`_......`	6	85
MIMAT0018803	tca-miR-29-3p	1	`_......`	6	85
MIMAT0018792	tca-miR-3860-5p	1	`_......`	6	85
MIMAT0018629	tca-miR-995-3p	1	`_......`	6	85
MIMAT0016415	cin-miR-367-5p	7	`_......`	2	85
MIMAT0016402	cin-miR-29-3p	1	`_......`	6	85
MIMAT0017890	rno-miR-3590-3p	1	`_......`	6	85
MIMAT0015735	ppy-miR-29c	1	`_......`	6	85
MIMAT0015656	nvi-miR-29b	1	`_......`	6	85
MIMAT0014967	oar-miR-29a	1	`_......`	6	85
MIMAT0014954	mmu-miR-374c-3p	3	`......_`	8	85
MIMAT0014849	mmu-miR-3070-2-3p	8	`_......`	3	85
MIMAT0014847	mmu-miR-3070-3p	8	`_......`	3	85
MIMAT0014747	api-miR-998	1	`_......`	6	85
MIMAT0014726	api-miR-29	1	`_......`	6	85
MIMAT0014601	tgu-miR-29b-3p	1	`_......`	6	85
MIMAT0014532	tgu-miR-29a-3p	1	`_......`	6	85
MIMAT0014445	cqu-miR-998	1	`_......`	6	85
MIMAT0014411	cqu-miR-285-3p	1	`_......`	6	85
MIMAT0014273	aae-miR-285	1	`_......`	6	85
MIMAT0014227	aae-miR-998	1	`_......`	6	85
MIMAT0013870	ssc-miR-29a	2	`_......`	7	85
MIMAT0012964	eca-miR-29c	1	`_......`	6	85
MIMAT0012941	eca-miR-29b	1	`_......`	6	85
MIMAT0012940	eca-miR-29a	1	`_......`	6	85
MIMAT0017366	rno-miR-295-3p	8	`_......`	3	85
MIMAT0013603	bmo-miR-998	1	`_......`	6	85
MIMAT0013601	bmo-miR-11-5p	1	`_......`	6	85
MIMAT0012695	isc-miR-285	1	`_......`	6	85
MIMAT0012656	dpu-miR-285	1	`_......`	6	85
MIMAT0012454	dsi-miR-995-3p	1	`_......`	6	85
MIMAT0012272	dps-miR-995-3p	1	`_......`	6	85
MIMAT0011515	crm-miR-83	1	`_......`	6	85
MIMAT0009613	sko-miR-29b-3p	1	`_......`	6	85
MIMAT0009612	sko-miR-29a	1	`_......`	6	85
MIMAT0009565	lgi-miR-29	1	`_......`	6	85
MIMAT0009514	cte-miR-29b	1	`_......`	6	85
MIMAT0009513	cte-miR-29a	1	`_......`	6	85
MIMAT0009471	bfl-miR-29a-3p	1	`_......`	6	85
MIMAT0009154	bmo-miR-285	1	`_......`	6	85
MIMAT0009275	bta-miR-29d-3p	1	`_......`	6	85
MIMAT0009088	dya-miR-285	1	`_......`	6	85
MIMAT0008984	dwi-miR-285	1	`_......`	6	85
MIMAT0008969	dvi-miR-285-3p	1	`_......`	6	85
MIMAT0008888	dsi-miR-285	1	`_......`	6	85
MIMAT0008809	dse-miR-285	1	`_......`	6	85
MIMAT0008651	dmo-miR-285	1	`_......`	6	85
MIMAT0008581	dgr-miR-285	1	`_......`	6	85
MIMAT0008514	der-miR-285	1	`_......`	6	85
MIMAT0008419	dan-miR-285	1	`_......`	6	85
MIMAT0008082	ptr-miR-29c	1	`_......`	6	85
MIMAT0006705	cfa-miR-29c	1	`_......`	6	85
MIMAT0006626	cfa-miR-29a	1	`_......`	6	85
MIMAT0006625	cfa-miR-29b	1	`_......`	6	85
MIMAT0026860	mml-miR-374b-3p	1	`......_`	6	85
MIMAT0006169	mml-miR-29c-3p	1	`_......`	6	85
MIMAT0006168	mml-miR-29b-3p	1	`_......`	6	85
MIMAT0006809	oan-miR-29b-3p	1	`_......`	6	85
MIMAT0006807	oan-miR-29a-3p	1	`_......`	6	85
MIMAT0005548	mcmv-miR-m59-1	1	`......_`	6	85
MIMAT0005518	dme-miR-998-3p	1	`_......`	6	85
MIMAT0005514	dme-miR-995-3p	1	`_......`	6	85
MIMAT0004427	ame-miR-29b	1	`_......`	6	85
MIMAT0004164	mdo-miR-29a-3p	1	`_......`	6	85
MIMAT0004163	mdo-miR-29b-3p	1	`_......`	6	85
MIMAT0003978	sme-miR-746-3p	1	`_......`	6	85
MIMAT0003829	bta-miR-29c	1	`_......`	6	85
MIMAT0003828	bta-miR-29b	1	`_......`	6	85
MIMAT0003677	xtr-miR-29c-3p	1	`_......`	6	85
MIMAT0003656	xtr-miR-29a	1	`_......`	6	85
MIMAT0003573	xtr-miR-29b	1	`_......`	6	85
MIMAT0003572	xtr-miR-29d	1	`_......`	6	85
MIMAT0003518	bta-miR-29a	2	`_......`	7	85
MIMAT0003435	rlcv-miR-rL1-6-3p	1	`_......`	6	85
MIMAT0026618	hsa-miR-585-5p	2	`_......`	7	85
MIMAT0003056	tni-miR-29b	1	`_......`	6	85
MIMAT0003055	fru-miR-29b	1	`_......`	6	85
MIMAT0003054	tni-miR-29a	1	`_......`	6	85
MIMAT0003053	fru-miR-29a	1	`_......`	6	85
MIMAT0002441	mne-miR-29b	1	`_......`	6	85
MIMAT0002440	sla-miR-29b	1	`_......`	6	85
MIMAT0002439	ppa-miR-29b	1	`_......`	6	85
MIMAT0002438	age-miR-29b	1	`_......`	6	85
MIMAT0002437	lla-miR-29b	1	`_......`	6	85
MIMAT0002436	ggo-miR-29b	1	`_......`	6	85
MIMAT0002435	ptr-miR-29b	1	`_......`	6	85
MIMAT0002434	ppy-miR-29b	1	`_......`	6	85
MIMAT0002368	mne-miR-29a	2	`_......`	7	85
MIMAT0002367	lla-miR-29a	2	`_......`	7	85
MIMAT0002366	sla-miR-29a	2	`_......`	7	85
MIMAT0002365	mml-miR-29a-3p	2	`_......`	7	85
MIMAT0002364	ptr-miR-29a	2	`_......`	7	85
MIMAT0002363	ppy-miR-29a	2	`_......`	7	85
MIMAT0002362	ppa-miR-29a	2	`_......`	7	85
MIMAT0002361	age-miR-29a	2	`_......`	7	85
MIMAT0002360	ggo-miR-29a	2	`_......`	7	85
MIMAT0002166	ssc-miR-29c	1	`_......`	6	85
MIMAT0002137	ssc-miR-29b	1	`_......`	6	85
MIMAT0001802	dre-miR-29a	1	`_......`	6	85
MIMAT0001801	dre-miR-29b	1	`_......`	6	85
MIMAT0001295	cbr-miR-83	1	`_......`	6	85
MIMAT0001249	dps-miR-285	1	`_......`	6	85
MIMAT0001183	gga-miR-29c-3p	1	`_......`	6	85
MIMAT0001097	gga-miR-29b-3p	1	`_......`	6	85
MIMAT0001096	gga-miR-29a-3p	1	`_......`	6	85
MIMAT0003390	ebv-miR-BART1-3p	1	`_......`	6	85
MIMAT0000803	rno-miR-29c-3p	1	`_......`	6	85
MIMAT0000802	rno-miR-29a-3p	1	`_......`	6	85
MIMAT0000801	rno-miR-29b-3p	1	`_......`	6	85
MIMAT0000681	hsa-miR-29c-3p	1	`_......`	6	85
MIMAT0000536	mmu-miR-29c-3p	1	`_......`	6	85
MIMAT0000535	mmu-miR-29a-3p	1	`_......`	6	85
MIMAT0000356	dme-miR-285-3p	1	`_......`	6	85
MIMAT0000127	mmu-miR-29b-3p	1	`_......`	6	85
MIMAT0000100	hsa-miR-29b-3p	1	`_......`	6	85
MIMAT0000086	hsa-miR-29a-3p	1	`_......`	6	85
MIMAT0000056	cel-miR-83-3p	1	`_......`	6	85