Result for your query miRNA sequence
>hcmv-miR-us5-2
uuaugaua

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ttatgata8
MIMAT0037298ame-miR-98931......._787
MIMAT0035798tae-miR9675-3p2......._887
MIMAT0033174ppc-miR-8318-5p2......._887
MIMAT0033068ppc-miR-8282a-3p1_.......787
MIMAT0024753nta-miR6145b8_.......287
MIMAT0022331cin-miR-5603-5p1......._787
MIMAT0018640tca-miR-3809-5p7......._187
MIMAT0007624gga-miR-17251_.......787
MIMAT0007321oan-miR-1419f-3p2_.......887
MIMAT0005081ppt-miR902i-5p1......._787
MIMAT0005079ppt-miR902h-5p1......._787
MIMAT0001580hcmv-miR-US5-2-3p1_.......787
MIMAT0033693pxy-miR-84861.a......887
MIMAT0018110hsa-miR-3682-3p1.g......887
MIMAT0037236ata-miR9863b-5p3......__875
MIMAT0037104ata-miR9863a-5p3......__875
MIMAT0036609tch-miR-376b-3p6_......_175
MIMAT0036537tch-miR-376a-3p6_......_175
MIMAT0036505tch-miR-539-3p6_......_175
MIMAT0036247chi-miR-487a-3p7_......_275
MIMAT0036189chi-miR-376d6_......_175
MIMAT0036186chi-miR-376b-3p6_......_175
MIMAT0035987chi-miR-154b-3p6_......_175
MIMAT0035985chi-miR-154a-3p7_......_275
MIMAT0035661bra-miR9554-5p3__......875
MIMAT0035591dvi-miR-970-3p6......__175
MIMAT0035492bdi-miR94851......__675
MIMAT0034683eca-miR-91326......__175
MIMAT0034489eca-miR-154b7_......_275
MIMAT0034432cfa-miR-507a1_......_675
MIMAT0034324cfa-miR-88316......__175
MIMAT0034156gra-miR166c3_......_875
MIMAT0034139gra-miR87347_......_275
MIMAT0034100gra-miR87127__......275
MIMAT0033861atr-miR8578.12......__775
MIMAT0033275ppc-miR-8356a-3p6__......175
MIMAT0033268ppc-miR-8354-5p1_......_675
MIMAT0031275stu-miR4376-3p8_......_375
MIMAT0030961stu-miR8046-5p1_......_675
MIMAT0031220stu-miR8040-5p6......__175
MIMAT0030932stu-miR8028-3p8......__375
MIMAT0030692prd-miR-7924-5p6__......175
MIMAT0030380ptc-miR78206_......_175
MIMAT0030140bdi-miR7711-5p.21__......675
MIMAT0032236lva-miR-4850-5p7__......275
MIMAT0032165pmi-miR-200-5p7_......_275
MIMAT0029817mmu-miR-7655-3p2......__775
MIMAT0025246ptc-miR64432_......_775
MIMAT0024997hme-miR-9706......__175
MIMAT0024453mse-miR-9706......__175
MIMAT0024193ggo-miR-376b6_......_175
MIMAT0024159ggo-miR-376a6_......_175
MIMAT0024145ggo-miR-487a7_......_275
MIMAT0023787cgr-miR-154-3p7_......_275
MIMAT0022452gma-miR5670a7_......_275
MIMAT0022393ath-miR56331_......_675
MIMAT0022080aca-miR-54546__......175
MIMAT0021067gma-miR50401__......675
MIMAT0020532ath-miR50268......__375
MIMAT0021036hsa-miR-5007-3p6_......_175
MIMAT0020073spu-miR-48507__......275
MIMAT0019318oar-miR-154b-3p7_......_275
MIMAT0019316oar-miR-154a-3p7_......_275
MIMAT0019305oar-miR-487a-3p6_......_175
MIMAT0019297oar-miR-539-3p7_......_275
MIMAT0019287oar-miR-376a-3p6_......_175
MIMAT0019285oar-miR-376b-3p6_......_175
MIMAT0019281oar-miR-376d6_......_175
MIMAT0018663tca-miR-3805b-3p1_......_675
MIMAT0018655tca-miR-3815-3p1......__675
MIMAT0018584ame-miR-37986......__175
MIMAT0018533ame-miR-37607_......_275
MIMAT0016597cin-miR-4054-5p1_......_675
MIMAT0015905ppy-miR-487a7_......_275
MIMAT0015865ppy-miR-376b6_......_175
MIMAT0015864ppy-miR-376a6_......_175
MIMAT0015716ssc-miR-376a-3p6_......_175
MIMAT0015461bmo-miR-32761_......_675
MIMAT0014378cqu-miR-9706......__175
MIMAT0014292aae-miR-9706......__175
MIMAT0013161eca-miR-487a7_......_275
MIMAT0013144eca-miR-376b6_......_175
MIMAT0013143eca-miR-376a6_......_175
MIMAT0013758bmo-miR-28416_......_175
MIMAT0013516hsa-miR-2681-3p6__......175
MIMAT0012488dsi-miR-970-3p6......__175
MIMAT0012222dps-miR-970-3p6......__175
MIMAT0010125bmo-miR-970-3p6......__175
MIMAT0010105aga-miR-9706......__175
MIMAT0010092tca-miR-970-3p6......__175
MIMAT0010014ppt-miR20776......__175
MIMAT0009946bta-miR-376a6_......_175
MIMAT0010199bta-miR-376d6_......_175
MIMAT0009945bta-miR-376b6_......_175
MIMAT0009902cfa-miR-487a7_......_275
MIMAT0009887cfa-miR-376b6_......_175
MIMAT0013801spu-miR-200-5p7_......_275
MIMAT0008161ptr-miR-487a7_......_275
MIMAT0008127ptr-miR-376b6_......_175
MIMAT0008126ptr-miR-376a6_......_175
MIMAT0007899bmo-miR-79-3p7......__275
MIMAT0006722cfa-miR-376a6_......_175
MIMAT0006346mml-miR-487a7_......_275
MIMAT0006304mml-miR-376b-3p6_......_175
MIMAT0006303mml-miR-376a-3p6_......_175
MIMAT0026830mml-miR-154-3p7_......_275
MIMAT0006960oan-miR-13572......__775
MIMAT0005077ppt-miR902g-5p1_......_675
MIMAT0005075ppt-miR902f-5p1_......_675
MIMAT0005073ppt-miR902e-5p1_......_675
MIMAT0005071ppt-miR902d-5p1_......_675
MIMAT0005069ppt-miR902c-5p1_......_675
MIMAT0020357cel-miR-1022-3p1__......675
MIMAT0005486dme-miR-970-3p6......__175
MIMAT0004963ppt-miR902b-5p1_......_675
MIMAT0004962ppt-miR902a-5p1_......_675
MIMAT0004299cbr-miR-3926__......175
MIMAT0004045osa-miR810a6......__175
MIMAT0012120sme-miR-277c-5p6_......_175
MIMAT0003805bta-miR-487a7_......_275
MIMAT0003443rlcv-miR-rL1-13-3p7_......_275
MIMAT0003416ebv-miR-BART7-3p7_......_275
MIMAT0003196rno-miR-376b-3p6_......_175
MIMAT0022705hsa-miR-539-3p6_......_175
MIMAT0002178hsa-miR-487a-3p7_......_275
MIMAT0002172hsa-miR-376b-3p6_......_175
MIMAT0001327ath-miR4191......__675
MIMAT0001092mmu-miR-376b-3p6_......_175
MIMAT0017136rno-miR-154-3p7_......_275
MIMAT0000768cel-miR-392-3p6__......175
MIMAT0000729hsa-miR-376a-3p6_......_175
MIMAT0000453hsa-miR-154-3p7_......_275
MIMAT0004537mmu-miR-154-3p7_......_275