| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ttcgttt | 7 | ||
| MIMAT0033585 | sma-miR-8440-3p | 2 | ....... | 8 | 100 |
| MIMAT0032835 | cel-miR-8209-5p | 8 | ....... | 2 | 100 |
| MIMAT0026421 | sbi-miR6225-3p | 8 | ....... | 2 | 100 |
| MIMAT0017688 | aly-miR837-3p | 7 | ....... | 1 | 100 |
| MIMAT0016954 | rlcv-miR-rL1-30-3p | 2 | ....... | 8 | 100 |
| MIMAT0013818 | osa-miR2863b | 1 | ....... | 7 | 100 |
| MIMAT0012470 | dsi-miR-961-3p | 1 | ....... | 7 | 100 |
| MIMAT0020856 | dme-miR-961-3p | 1 | ....... | 7 | 100 |
| MIMAT0004259 | ath-miR837-3p | 7 | ....... | 1 | 100 |
| MIMAT0035598 | dvi-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0035462 | sly-miR9473-3p | 6 | _...... | 1 | 85 |
| MIMAT0035287 | gsa-miR-76a-3p | 1 | ......_ | 6 | 85 |
| MIMAT0034487 | eca-miR-329b | 6 | ......_ | 1 | 85 |
| MIMAT0034328 | cfa-miR-8835 | 1 | ......_ | 6 | 85 |
| MIMAT0033415 | str-miR-76-3p | 1 | ......_ | 6 | 85 |
| MIMAT0033088 | ppc-miR-76-3p | 1 | ......_ | 6 | 85 |
| MIMAT0033055 | ppc-miR-8278-5p | 1 | _...... | 6 | 85 |
| MIMAT0030819 | prd-miR-76-3p | 1 | ......_ | 6 | 85 |
| MIMAT0030155 | bdi-miR7716-3p | 1 | ......_ | 6 | 85 |
| MIMAT0032221 | lva-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0032174 | pmi-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0029777 | cbn-miR-76 | 1 | ......_ | 6 | 85 |
| MIMAT0026455 | sbi-miR6235-3p | 6 | ......_ | 1 | 85 |
| MIMAT0026070 | mdm-miR858 | 1 | ......_ | 6 | 85 |
| MIMAT0024999 | hme-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0024433 | mse-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0023496 | hco-miR-76 | 1 | ......_ | 6 | 85 |
| MIMAT0022417 | ath-miR858b | 1 | ......_ | 6 | 85 |
| MIMAT0021471 | asu-miR-76-3p | 1 | ......_ | 6 | 85 |
| MIMAT0020766 | sly-miR5302a | 6 | _...... | 1 | 85 |
| MIMAT0020068 | spu-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0018946 | hsa-miR-548ad-3p | 8 | _...... | 3 | 85 |
| MIMAT0018315 | gma-miR4399 | 8 | ......_ | 3 | 85 |
| MIMAT0018251 | gma-miR4359a | 6 | ......_ | 1 | 85 |
| MIMAT0016203 | ppy-miR-1282 | 1 | _...... | 6 | 85 |
| MIMAT0015629 | bmo-miR-3421 | 8 | _...... | 3 | 85 |
| MIMAT0014736 | api-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0014386 | cqu-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0014267 | aae-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0012889 | eca-miR-1282 | 1 | _...... | 6 | 85 |
| MIMAT0013670 | bmo-miR-2780a-3p | 3 | _...... | 8 | 85 |
| MIMAT0012675 | dpu-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0012486 | dsi-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0012220 | dps-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0011525 | crm-miR-76 | 1 | ......_ | 6 | 85 |
| MIMAT0011466 | cbr-miR-76 | 1 | ......_ | 6 | 85 |
| MIMAT0011397 | sme-miR-76-3p | 1 | ......_ | 6 | 85 |
| MIMAT0015296 | bmo-miR-274-3p | 1 | _...... | 6 | 85 |
| MIMAT0010121 | ame-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0010098 | tca-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0009954 | bta-miR-1282 | 1 | _...... | 6 | 85 |
| MIMAT0009601 | lgi-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0009548 | cte-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0009501 | bfl-miR-375 | 3 | ......_ | 8 | 85 |
| MIMAT0008001 | ptr-miR-1282 | 1 | _...... | 6 | 85 |
| MIMAT0007857 | aga-miR-981 | 1 | ......_ | 6 | 85 |
| MIMAT0005940 | hsa-miR-1282 | 1 | _...... | 6 | 85 |
| MIMAT0005497 | dme-miR-981-3p | 1 | ......_ | 6 | 85 |
| MIMAT0017098 | rno-miR-19a-5p | 1 | _...... | 6 | 85 |
| MIMAT0020800 | dme-miR-274-3p | 2 | _...... | 7 | 85 |
| MIMAT0000048 | cel-miR-76-3p | 1 | ......_ | 6 | 85 |
