VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hsv1-miR-470
uugccug

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`ttgcctg`	7
MIMAT0029889	mmu-miR-216c-3p	2	`.......`	8	100
MIMAT0027716	mmu-miR-6908-5p	1	`.......`	7	100
MIMAT0027689	hsa-miR-6894-3p	1	`.......`	7	100
MIMAT0024043	ptr-miR-4742	8	`.......`	2	100
MIMAT0023277	osa-miR5806	8	`.......`	2	100
MIMAT0022064	aca-miR-5442	8	`.......`	2	100
MIMAT0019872	hsa-miR-4742-5p	8	`.......`	2	100
MIMAT0019563	pma-miR-1788b-3p	7	`.......`	1	100
MIMAT0008402	hsv1-miR-H4-3p	2	`.......`	8	100
MIMAT0037200	ata-miR160c-5p	1	`_......`	6	85
MIMAT0037156	ata-miR160a-5p	1	`_......`	6	85
MIMAT0037102	ata-miR160b-5p	1	`_......`	6	85
MIMAT0037065	ssc-miR-9846-3p	1	`_......`	6	85
MIMAT0036897	oha-miR-31-5p	8	`......_`	3	85
MIMAT0036754	oha-miR-1788-3p	6	`_......`	1	85
MIMAT0036058	chi-miR-214-5p	1	`_......`	6	85
MIMAT0035932	chi-miR-1271-3p	3	`_......`	8	85
MIMAT0035511	bdi-miR160f	1	`_......`	6	85
MIMAT0034802	efu-miR-9211	3	`_......`	8	85
MIMAT0034768	efu-miR-9188a	1	`_......`	6	85
MIMAT0034279	cfa-miR-8789	8	`_......`	3	85
MIMAT0033912	atr-miR160	1	`_......`	6	85
MIMAT0033346	str-miR-72-5p	6	`......_`	1	85
MIMAT0032863	ppc-miR-8216-3p	6	`......_`	1	85
MIMAT0032789	cel-miR-8188-5p	6	`......_`	1	85
MIMAT0032788	cel-miR-8187-3p	6	`......_`	1	85
MIMAT0032645	ssa-miR-456-5p	7	`_......`	2	85
MIMAT0032554	ssa-miR-24a-4-5p	1	`_......`	6	85
MIMAT0032514	ssa-miR-214-5p	1	`_......`	6	85
MIMAT0032413	ssa-miR-1788-3p	6	`_......`	1	85
MIMAT0031789	cpa-miR160f-5p	1	`_......`	6	85
MIMAT0031788	cpa-miR160e	1	`_......`	6	85
MIMAT0031787	cpa-miR160d	1	`_......`	6	85
MIMAT0031785	cpa-miR160c-5p	1	`_......`	6	85
MIMAT0031784	cpa-miR160b	1	`_......`	6	85
MIMAT0031783	cpa-miR160a	1	`_......`	6	85
MIMAT0031680	bbe-miR-4860-5p	1	`_......`	6	85
MIMAT0031439	ppe-miR160b	1	`_......`	6	85
MIMAT0031438	ppe-miR160a	1	`_......`	6	85
MIMAT0031285	stu-miR160b	1	`_......`	6	85
MIMAT0031283	stu-miR160a-5p	1	`_......`	6	85
MIMAT0030478	prd-miR-72-5p	6	`......_`	1	85
MIMAT0032197	lva-miR-31-5p	6	`......_`	1	85
MIMAT0032147	pmi-miR-31-5p	6	`......_`	1	85
MIMAT0029876	mmu-miR-6715-5p	7	`_......`	2	85
MIMAT0029717	cbn-miR-72b	6	`......_`	1	85
MIMAT0029186	mes-miR160h	1	`_......`	6	85
MIMAT0029185	mes-miR160g	1	`_......`	6	85
MIMAT0029184	mes-miR160f	1	`_......`	6	85
MIMAT0029183	mes-miR160e	1	`_......`	6	85
MIMAT0029182	mes-miR160d	1	`_......`	6	85
MIMAT0029181	mes-miR160c	1	`_......`	6	85
MIMAT0029180	mes-miR160b	1	`_......`	6	85
MIMAT0029179	mes-miR160a	1	`_......`	6	85
MIMAT0028375	mml-miR-1911-3p	8	`_......`	3	85
MIMAT0026180	cme-miR160c	1	`_......`	6	85
MIMAT0026178	cme-miR160d	1	`_......`	6	85
MIMAT0026171	cme-miR160b	1	`_......`	6	85
MIMAT0026072	cme-miR160a	1	`_......`	6	85
MIMAT0025904	mdm-miR160e	1	`_......`	6	85
MIMAT0025903	mdm-miR160d	1	`_......`	6	85
MIMAT0025902	mdm-miR160c	1	`_......`	6	85
MIMAT0025901	mdm-miR160b	1	`_......`	6	85
MIMAT0025900	mdm-miR160a	1	`_......`	6	85
MIMAT0028090	mmu-miR-7092-5p	8	`......_`	3	85
MIMAT0027886	mmu-miR-6992-5p	1	`_......`	6	85
MIMAT0027778	mmu-miR-6939-5p	6	`_......`	1	85
MIMAT0027686	hsa-miR-6893-5p	6	`_......`	1	85
MIMAT0027516	hsa-miR-6808-5p	6	`_......`	1	85
MIMAT0025842	hsa-miR-6715b-5p	7	`_......`	2	85
MIMAT0025766	gga-miR-6665-5p	1	`_......`	6	85
MIMAT0025588	mmu-miR-6541	8	`_......`	3	85
MIMAT0025499	htu-miR160a	1	`_......`	6	85
MIMAT0025485	hsa-miR-6514-3p	2	`_......`	7	85
MIMAT0025478	hsa-miR-6511a-5p	6	`_......`	1	85
MIMAT0025360	ssc-miR-31	6	`......_`	1	85
MIMAT0025055	rno-miR-6318	2	`_......`	7	85
MIMAT0024888	gma-miR160f	1	`_......`	6	85
MIMAT0027318	ppe-miR482e	1	`......_`	6	85
MIMAT0024643	nta-miR160d	1	`_......`	6	85
MIMAT0024642	nta-miR160c	1	`_......`	6	85
MIMAT0024641	nta-miR160b	1	`_......`	6	85
MIMAT0024640	nta-miR160a	1	`_......`	6	85
MIMAT0027225	lus-miR160j	1	`_......`	6	85
MIMAT0027222	lus-miR160i	1	`_......`	6	85
MIMAT0027211	lus-miR160h	1	`_......`	6	85
MIMAT0027202	lus-miR160g	1	`_......`	6	85
MIMAT0027195	lus-miR160f	1	`_......`	6	85
MIMAT0027189	lus-miR160e	1	`_......`	6	85
MIMAT0027171	lus-miR160d	1	`_......`	6	85
MIMAT0027151	lus-miR160c	1	`_......`	6	85
MIMAT0027150	lus-miR160b	1	`_......`	6	85
MIMAT0027137	lus-miR160a	1	`_......`	6	85
MIMAT0024514	cca-miR160b	1	`_......`	6	85
MIMAT0024513	cca-miR160a	1	`_......`	6	85
MIMAT0027108	mml-miR-1271-3p	2	`_......`	7	85
MIMAT0023902	cgr-miR-31-5p	6	`......_`	1	85
MIMAT0023851	cgr-miR-214-5p	1	`_......`	6	85
MIMAT0023747	cgr-miR-1271	2	`_......`	7	85
MIMAT0023620	bna-miR160d	1	`_......`	6	85
MIMAT0023619	bna-miR160c	1	`_......`	6	85
MIMAT0023618	bna-miR160b	1	`_......`	6	85
MIMAT0023617	bna-miR160a	1	`_......`	6	85
MIMAT0023602	sly-miR482b	3	`......_`	8	85
MIMAT0023600	stu-miR482d-3p	3	`......_`	8	85
MIMAT0023528	dpr-miR160	1	`_......`	6	85
MIMAT0023498	hco-miR-72	6	`......_`	1	85
MIMAT0022755	vun-miR160	1	`_......`	6	85
MIMAT0022670	ola-miR-1788	6	`_......`	1	85
MIMAT0021930	aca-miR-31-5p	6	`......_`	1	85
MIMAT0021871	aca-miR-214-5p	1	`_......`	6	85
MIMAT0021806	aca-miR-1788-3p	6	`_......`	1	85
MIMAT0021468	asu-miR-72-5p	6	`......_`	1	85
MIMAT0020682	bdi-miR160e-5p	1	`_......`	6	85
MIMAT0020681	bdi-miR160d-5p	1	`_......`	6	85
MIMAT0020675	bdi-miR160c-5p	1	`_......`	6	85
MIMAT0020668	bdi-miR160b-5p	1	`_......`	6	85
MIMAT0020661	bdi-miR160a-5p	1	`_......`	6	85
MIMAT0020635	mmu-miR-5125	3	`_......`	8	85
MIMAT0020973	gma-miR160e	1	`_......`	6	85
MIMAT0020972	gma-miR160d	1	`_......`	6	85
MIMAT0020971	gma-miR160c	1	`_......`	6	85
MIMAT0020970	gma-miR160b	1	`_......`	6	85
MIMAT0020088	bfl-miR-4860-5p	1	`_......`	6	85
MIMAT0020378	tcc-miR160c	1	`_......`	6	85
MIMAT0020377	tcc-miR160b	1	`_......`	6	85
MIMAT0020376	tcc-miR160a	1	`_......`	6	85
MIMAT0019783	hsa-miR-4692	7	`_......`	2	85
MIMAT0019755	hsa-miR-4673	8	`_......`	3	85
MIMAT0019705	hsa-miR-4645-5p	8	`_......`	3	85
MIMAT0019687	osa-miR3982-3p	3	`......_`	8	85
MIMAT0019562	pma-miR-1788a-3p	6	`_......`	1	85
MIMAT0019051	hsa-miR-4514	7	`_......`	2	85
MIMAT0019232	hsa-miR-4423-5p	3	`......_`	8	85
MIMAT0018363	far-miR160	1	`_......`	6	85
MIMAT0018212	ttu-miR160	1	`_......`	6	85
MIMAT0018814	tca-miR-3865-5p	6	`......_`	1	85
MIMAT0018147	pab-miR160b	1	`_......`	6	85
MIMAT0018146	pab-miR160a	1	`_......`	6	85
MIMAT0018003	hsa-miR-3622a-5p	6	`_......`	1	85
MIMAT0017967	ssc-miR-1271	1	`_......`	6	85
MIMAT0016897	hsa-miR-4269	7	`_......`	2	85
MIMAT0016322	ahy-miR160-5p	1	`_......`	6	85
MIMAT0016287	sja-miR-3483-3p	2	`_......`	7	85
MIMAT0017439	aly-miR160c-5p	1	`_......`	6	85
MIMAT0017437	aly-miR160b-5p	1	`_......`	6	85
MIMAT0017435	aly-miR160a-5p	1	`_......`	6	85
MIMAT0015577	bmo-miR-3383-5p	2	`_......`	7	85
MIMAT0015497	bmo-miR-3308-3p	8	`......_`	3	85
MIMAT0014978	hsa-miR-3116	1	`_......`	6	85
MIMAT0014615	tgu-miR-31	6	`......_`	1	85
MIMAT0027021	tgu-miR-214-5p	1	`_......`	6	85
MIMAT0026964	tgu-miR-456-5p	7	`_......`	2	85
MIMAT0014340	ghr-miR482b	3	`......_`	8	85
MIMAT0014206	rco-miR160c	1	`_......`	6	85
MIMAT0014154	rco-miR160b	1	`_......`	6	85
MIMAT0014153	rco-miR160a	1	`_......`	6	85
MIMAT0014107	bma-miR-72	6	`......_`	1	85
MIMAT0013981	zma-miR160g-5p	1	`_......`	6	85
MIMAT0013115	eca-miR-31	6	`......_`	1	85
MIMAT0013044	eca-miR-632	2	`_......`	7	85
MIMAT0012814	ptr-miR-661	1	`_......`	6	85
MIMAT0012659	dpu-miR-31	6	`......_`	1	85
MIMAT0012554	aqc-miR160b	1	`_......`	6	85
MIMAT0012553	aqc-miR160a	1	`_......`	6	85
MIMAT0013517	hsa-miR-2682-5p	6	`_......`	1	85
MIMAT0011661	ppc-miR-72	6	`......_`	1	85
MIMAT0011567	crm-miR-72-5p	6	`......_`	1	85
MIMAT0011324	sbi-miR160f	1	`_......`	6	85
MIMAT0011295	dre-miR-1788-3p	6	`_......`	1	85
MIMAT0010154	bra-miR160a-5p	1	`_......`	6	85
MIMAT0019168	bfl-miR-2059-5p	8	`......_`	3	85
MIMAT0009657	spu-miR-31	6	`......_`	1	85
MIMAT0009614	sko-miR-31	6	`......_`	1	85
MIMAT0009566	lgi-miR-31	6	`......_`	1	85
MIMAT0009515	cte-miR-31	6	`......_`	1	85
MIMAT0008362	tca-miR-31-5p	6	`......_`	1	85
MIMAT0008230	ptr-miR-550	3	`_......`	8	85
MIMAT0007914	sly-miR160a	1	`_......`	6	85
MIMAT0006599	cfa-miR-31	6	`......_`	1	85
MIMAT0006500	mml-miR-661	1	`_......`	6	85
MIMAT0006418	mml-miR-550-5p	3	`_......`	8	85
MIMAT0007701	gga-miR-1788-3p	6	`_......`	1	85
MIMAT0007491	gga-miR-1623	7	`_......`	2	85
MIMAT0006079	odi-miR-31	6	`......_`	1	85
MIMAT0015244	osa-miR1423-5p	6	`......_`	1	85
MIMAT0007170	oan-miR-214-5p	1	`_......`	6	85
MIMAT0007111	oan-miR-31-5p	6	`......_`	1	85
MIMAT0005656	vvi-miR160e	1	`_......`	6	85
MIMAT0005654	vvi-miR160d	1	`_......`	6	85
MIMAT0005653	vvi-miR160c	1	`_......`	6	85
MIMAT0005652	vvi-miR160b	1	`_......`	6	85
MIMAT0005651	vvi-miR160a	1	`_......`	6	85
MIMAT0005380	cre-miR1144a.1	6	`_......`	1	85
MIMAT0005345	tae-miR160	1	`_......`	6	85
MIMAT0005219	smo-miR160b	1	`_......`	6	85
MIMAT0005218	smo-miR160a	1	`_......`	6	85
MIMAT0005036	ppt-miR160g	1	`_......`	6	85
MIMAT0005035	ppt-miR160f	1	`_......`	6	85
MIMAT0005034	ppt-miR160e	1	`_......`	6	85
MIMAT0004347	ppt-miR160a	1	`_......`	6	85
MIMAT0011115	mtr-miR160e	1	`_......`	6	85
MIMAT0011101	mtr-miR160d	1	`_......`	6	85
MIMAT0011062	mtr-miR160c	1	`_......`	6	85
MIMAT0011060	mtr-miR160b	1	`_......`	6	85
MIMAT0026679	mdo-miR-214-5p	1	`_......`	6	85
MIMAT0004094	mdo-miR-31-5p	8	`......_`	3	85
MIMAT0003980	sme-miR-31b-5p	6	`......_`	1	85
MIMAT0003979	sme-miR-31a-5p	6	`......_`	1	85
MIMAT0026645	gga-miR-456-5p	6	`_......`	1	85
MIMAT0003679	xtr-miR-31a	6	`......_`	1	85
MIMAT0003579	xtr-miR-34b	6	`_......`	1	85
MIMAT0003548	bta-miR-31	6	`......_`	1	85
MIMAT0022712	hsa-miR-1271-3p	3	`_......`	8	85
MIMAT0020925	hsa-miR-550a-3-5p	3	`_......`	8	85
MIMAT0003324	hsa-miR-661	1	`_......`	6	85
MIMAT0004800	hsa-miR-550a-5p	3	`_......`	8	85
MIMAT0026588	mml-miR-214-5p	1	`_......`	6	85
MIMAT0006785	ptc-miR482a.2	3	`......_`	8	85
MIMAT0001914	ptc-miR160h	1	`_......`	6	85
MIMAT0001913	ptc-miR160g	1	`_......`	6	85
MIMAT0001912	ptc-miR160f	1	`_......`	6	85
MIMAT0001911	ptc-miR160e-5p	1	`_......`	6	85
MIMAT0001910	ptc-miR160d	1	`_......`	6	85
MIMAT0001909	ptc-miR160c-5p	1	`_......`	6	85
MIMAT0001908	ptc-miR160b-5p	1	`_......`	6	85
MIMAT0001907	ptc-miR160a	1	`_......`	6	85
MIMAT0001750	zma-miR160f-5p	1	`_......`	6	85
MIMAT0001676	gma-miR160a-5p	1	`_......`	6	85
MIMAT0001641	mtr-miR160a	1	`_......`	6	85
MIMAT0017189	mghv-miR-M1-5-3p	6	`......_`	1	85
MIMAT0001405	sbi-miR160e	1	`_......`	6	85
MIMAT0001404	sbi-miR160b	1	`_......`	6	85
MIMAT0001403	sbi-miR160c	1	`_......`	6	85
MIMAT0001402	sbi-miR160a	1	`_......`	6	85
MIMAT0001401	sbi-miR160d	1	`_......`	6	85
MIMAT0001374	zma-miR160e	1	`_......`	6	85
MIMAT0001363	zma-miR160b-5p	1	`_......`	6	85
MIMAT0001362	zma-miR160d-5p	1	`_......`	6	85
MIMAT0001361	zma-miR160c-5p	1	`_......`	6	85
MIMAT0001360	zma-miR160a-5p	1	`_......`	6	85
MIMAT0001189	gga-miR-31-5p	6	`......_`	1	85
MIMAT0001179	gga-miR-34b-5p	6	`_......`	1	85
MIMAT0001031	osa-miR160f-5p	1	`_......`	6	85
MIMAT0001030	osa-miR160e-5p	1	`_......`	6	85
MIMAT0000810	rno-miR-31a-5p	6	`......_`	1	85
MIMAT0004664	mmu-miR-214-5p	1	`_......`	6	85
MIMAT0000631	osa-miR160d-5p	1	`_......`	6	85
MIMAT0000630	osa-miR160c-5p	1	`_......`	6	85
MIMAT0000629	osa-miR160b-5p	1	`_......`	6	85
MIMAT0000628	osa-miR160a-5p	1	`_......`	6	85
MIMAT0000538	mmu-miR-31-5p	6	`......_`	1	85
MIMAT0000322	cel-miR-266	6	`......_`	1	85
MIMAT0004564	hsa-miR-214-5p	1	`_......`	6	85
MIMAT0000180	ath-miR160c-5p	1	`_......`	6	85
MIMAT0000179	ath-miR160b	1	`_......`	6	85
MIMAT0000178	ath-miR160a-5p	1	`_......`	6	85
MIMAT0000089	hsa-miR-31-5p	6	`......_`	1	85
MIMAT0000044	cel-miR-72-5p	6	`......_`	1	85