VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hsv2-miR-h7-3p
uuggauu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`ttggatt`	7
MIMAT0035671	bra-miR9559-5p	2	`.......`	8	100
MIMAT0034256	gra-miR7493b	1	`.......`	7	100
MIMAT0034212	gra-miR8774	1	`.......`	7	100
MIMAT0033911	atr-miR159	2	`.......`	8	100
MIMAT0031781	cpa-miR159b	2	`.......`	8	100
MIMAT0031780	cpa-miR159a	2	`.......`	8	100
MIMAT0031437	ppe-miR159	2	`.......`	8	100
MIMAT0030086	bdi-miR159b-3p.1	2	`.......`	8	100
MIMAT0029176	mes-miR159b	2	`.......`	8	100
MIMAT0028500	mdo-miR-7266-5p	7	`.......`	1	100
MIMAT0026168	cme-miR159b	2	`.......`	8	100
MIMAT0026160	cme-miR159a	2	`.......`	8	100
MIMAT0025899	mdm-miR159b	2	`.......`	8	100
MIMAT0025898	mdm-miR159a	2	`.......`	8	100
MIMAT0025497	htu-miR159a	2	`.......`	8	100
MIMAT0025283	hbr-miR159a	2	`.......`	8	100
MIMAT0024639	nta-miR159	2	`.......`	8	100
MIMAT0027235	lus-miR159c	2	`.......`	8	100
MIMAT0027233	lus-miR159b	2	`.......`	8	100
MIMAT0024410	mes-miR159a	2	`.......`	8	100
MIMAT0022392	ath-miR5632-3p	1	`.......`	7	100
MIMAT0022123	osa-miR5490	1	`.......`	7	100
MIMAT0021641	gma-miR159e-3p	2	`.......`	8	100
MIMAT0020292	ssp-miR159a	2	`.......`	8	100
MIMAT0020692	bdi-miR159a-3p	2	`.......`	8	100
MIMAT0021028	hsa-miR-5004-3p	2	`.......`	8	100
MIMAT0018450	csi-miR159	2	`.......`	8	100
MIMAT0018362	far-miR159	2	`.......`	8	100
MIMAT0018210	hvu-miR159a	2	`.......`	8	100
MIMAT0018209	hvu-miR159b	2	`.......`	8	100
MIMAT0017935	aly-miR4246	8	`.......`	2	100
MIMAT0016321	ahy-miR159	2	`.......`	8	100
MIMAT0017428	aly-miR159c-3p	2	`.......`	8	100
MIMAT0017426	aly-miR159b-3p	2	`.......`	8	100
MIMAT0017424	aly-miR159a-3p	2	`.......`	8	100
MIMAT0015491	bmo-miR-3303	1	`.......`	7	100
MIMAT0015375	hsv2-miR-H7-3p	2	`.......`	8	100
MIMAT0014152	rco-miR159	2	`.......`	8	100
MIMAT0013980	zma-miR159k-3p	2	`.......`	8	100
MIMAT0013979	zma-miR159j-3p	2	`.......`	8	100
MIMAT0013975	zma-miR159f-3p	2	`.......`	8	100
MIMAT0012502	dsi-miR-976	1	`.......`	7	100
MIMAT0015301	pvu-miR159a.1	2	`.......`	8	100
MIMAT0011166	mtr-miR159a	2	`.......`	8	100
MIMAT0010153	bra-miR159a	2	`.......`	8	100
MIMAT0009141	sly-miR159	2	`.......`	8	100
MIMAT0005650	vvi-miR159c	2	`.......`	8	100
MIMAT0005635	bna-miR159	2	`.......`	8	100
MIMAT0005344	tae-miR159b	2	`.......`	8	100
MIMAT0005343	tae-miR159a	2	`.......`	8	100
MIMAT0005217	smo-miR159	2	`.......`	8	100
MIMAT0005492	dme-miR-976-3p	1	`.......`	7	100
MIMAT0004992	pta-miR159c	2	`.......`	8	100
MIMAT0004991	pta-miR159b	1	`.......`	7	100
MIMAT0004990	pta-miR159a	1	`.......`	7	100
MIMAT0001904	ptc-miR159d	2	`.......`	8	100
MIMAT0001902	ptc-miR159b	2	`.......`	8	100
MIMAT0001901	ptc-miR159a	2	`.......`	8	100
MIMAT0001753	sbi-miR159b	2	`.......`	8	100
MIMAT0001714	zma-miR159d-3p	2	`.......`	8	100
MIMAT0001713	zma-miR159c-3p	2	`.......`	8	100
MIMAT0001712	zma-miR159b-3p	2	`.......`	8	100
MIMAT0001711	zma-miR159a-3p	2	`.......`	8	100
MIMAT0001675	gma-miR159a-3p	2	`.......`	8	100
MIMAT0001662	sof-miR159c	2	`.......`	8	100
MIMAT0001661	sof-miR159e	2	`.......`	8	100
MIMAT0001660	sof-miR159d	2	`.......`	8	100
MIMAT0001659	sof-miR159b	2	`.......`	8	100
MIMAT0001658	sof-miR159a	2	`.......`	8	100
MIMAT0001468	sbi-miR159a	2	`.......`	8	100
MIMAT0001027	osa-miR159f	2	`.......`	8	100
MIMAT0001026	osa-miR159e	2	`.......`	8	100
MIMAT0001025	osa-miR159d	2	`.......`	8	100
MIMAT0001024	osa-miR159c	2	`.......`	8	100
MIMAT0001023	osa-miR159b	2	`.......`	8	100
MIMAT0001022	osa-miR159a.1	2	`.......`	8	100
MIMAT0001015	ath-miR159c	2	`.......`	8	100
MIMAT0000207	ath-miR159b-3p	2	`.......`	8	100
MIMAT0000177	ath-miR159a	2	`.......`	8	100
MIMAT0037187	ata-miR5062a-3p	2	`_......`	7	85
MIMAT0036298	chi-miR-876-5p	1	`_......`	6	85
MIMAT0035594	dvi-miR-976-3p	1	`_......`	6	85
MIMAT0035424	nve-miR-9465	1	`......_`	6	85
MIMAT0035390	nve-miR-9430	1	`_......`	6	85
MIMAT0034838	efu-miR-9232	1	`......_`	6	85
MIMAT0034285	cfa-miR-8795	1	`......_`	6	85
MIMAT0034211	gra-miR8773	1	`......_`	6	85
MIMAT0032850	ppc-miR-2235b-5p	8	`......_`	3	85
MIMAT0032796	cel-miR-8191-3p	8	`......_`	3	85
MIMAT0030983	hsa-miR-8056	3	`_......`	8	85
MIMAT0030914	stu-miR8017	6	`......_`	1	85
MIMAT0030912	stu-miR8015-5p	3	`......_`	8	85
MIMAT0030824	prd-miR-7962-5p	7	`_......`	2	85
MIMAT0030236	bdi-miR7748a-5p	6	`......_`	1	85
MIMAT0028860	mdo-miR-7386g-5p	3	`......_`	8	85
MIMAT0028852	mdo-miR-7386e-5p	3	`......_`	8	85
MIMAT0028604	mdo-miR-7305-5p	8	`......_`	3	85
MIMAT0028600	mdo-miR-7303-5p	8	`......_`	3	85
MIMAT0028504	mdo-miR-7267-5p	1	`_......`	6	85
MIMAT0028470	mdo-miR-7252-5p	1	`......_`	6	85
MIMAT0028311	mml-miR-7182-3p	2	`_......`	7	85
MIMAT0026344	bma-miR-5846	2	`_......`	7	85
MIMAT0026058	mdm-miR319c	6	`......_`	1	85
MIMAT0027580	hsa-miR-6839-5p	3	`_......`	8	85
MIMAT0024621	mml-miR-378j	3	`_......`	8	85
MIMAT0024612	hsa-miR-378j	3	`_......`	8	85
MIMAT0024602	ptr-miR-378j	3	`_......`	8	85
MIMAT0024567	bta-miR-1246	3	`_......`	8	85
MIMAT0023452	hco-miR-5950	1	`_......`	6	85
MIMAT0023126	mtr-miR5746	1	`_......`	6	85
MIMAT0023014	bra-miR5717	3	`......_`	8	85
MIMAT0023013	bra-miR5716	1	`......_`	6	85
MIMAT0032130	gma-miR5667-5p	6	`_......`	1	85
MIMAT0023000	rgl-miR5575	1	`_......`	6	85
MIMAT0021207	mtr-miR4414a-3p	6	`......_`	1	85
MIMAT0021145	mtr-miR5212-5p	1	`_......`	6	85
MIMAT0021103	osa-miR5153	1	`_......`	6	85
MIMAT0021084	hsa-miR-5092	6	`_......`	1	85
MIMAT0018460	csi-miR393	6	`......_`	1	85
MIMAT0018290	gma-miR4383	3	`......_`	8	85
MIMAT0018032	vvi-miR3631b-3p	3	`......_`	8	85
MIMAT0016934	bta-miR-3578	7	`_......`	2	85
MIMAT0017946	ath-miR3440b-3p	1	`_......`	6	85
MIMAT0017903	rno-miR-3595	2	`_......`	7	85
MIMAT0016302	sja-miR-3493	1	`_......`	6	85
MIMAT0016212	ppy-miR-1290	1	`_......`	6	85
MIMAT0016115	ppy-miR-876-5p	1	`_......`	6	85
MIMAT0017712	aly-miR3440-3p	1	`_......`	6	85
MIMAT0013121	eca-miR-876-5p	1	`_......`	6	85
MIMAT0012924	eca-miR-1261	2	`_......`	7	85
MIMAT0012843	rno-miR-876	1	`_......`	6	85
MIMAT0013746	bmo-miR-2832	1	`......_`	6	85
MIMAT0011807	bta-miR-2299-5p	3	`_......`	8	85
MIMAT0010019	ppt-miR2085	8	`_......`	3	85
MIMAT0009932	cfa-miR-876	1	`_......`	6	85
MIMAT0009728	lgi-miR-1986	1	`_......`	6	85
MIMAT0009717	hru-miR-1986	1	`_......`	6	85
MIMAT0009380	bta-miR-876	1	`_......`	6	85
MIMAT0009339	bta-miR-502b	6	`_......`	1	85
MIMAT0008008	ptr-miR-1290	1	`_......`	6	85
MIMAT0007972	ptr-miR-1246	3	`_......`	8	85
MIMAT0007864	mmu-miR-1897-5p	3	`......_`	8	85
MIMAT0006519	mml-miR-876-5p	1	`_......`	6	85
MIMAT0007644	gga-miR-1740-3p	8	`......_`	3	85
MIMAT0009175	oan-miR-1422b-2-5p	7	`_......`	2	85
MIMAT0007092	oan-miR-1422j-5p	8	`_......`	3	85
MIMAT0006924	oan-miR-1420b-5p	6	`......_`	1	85
MIMAT0006893	oan-miR-1422i-5p	8	`_......`	3	85
MIMAT0006891	oan-miR-1422c-5p	7	`_......`	2	85
MIMAT0006885	oan-miR-1422b-1-5p	6	`_......`	1	85
MIMAT0006879	oan-miR-1422a-5p	7	`_......`	2	85
MIMAT0005898	hsa-miR-1246	3	`_......`	8	85
MIMAT0005880	hsa-miR-1290	1	`_......`	6	85
MIMAT0005159	ppt-miR1046-5p	1	`_......`	6	85
MIMAT0020881	dme-miR-984-3p	6	`......_`	1	85
MIMAT0004395	cre-miR912	1	`_......`	6	85
MIMAT0004924	hsa-miR-876-5p	1	`_......`	6	85
MIMAT0004854	mmu-miR-876-5p	1	`_......`	6	85
MIMAT0017034	rno-miR-336-3p	3	`_......`	8	85