Result for your query miRNA sequence
>hsv1-miR-h12
uugggacg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1ttgggacg8
MIMAT0014689hsv1-miR-H121........8100
MIMAT0033393str-miR-8375-3p2......._887
MIMAT0033375str-miR-7880p-3p2......._887
MIMAT0024340mml-miR-31222......._887
MIMAT0021414rmi-miR-53411_.......787
MIMAT0027083bdi-miR5178-5p2......._887
MIMAT0019683osa-miR3981-5p1_.......787
MIMAT0020956hsa-miR-4433a-5p7_.......187
MIMAT0018187hsa-miR-3913-5p2......._887
MIMAT0016222ppy-miR-13021......._787
MIMAT0014984hsa-miR-31222......._887
MIMAT0012969eca-miR-1302d1......._787
MIMAT0012934eca-miR-1302b1......._787
MIMAT0012907eca-miR-13021......._787
MIMAT0009436mmu-miR-19631_.......787
MIMAT0008021ptr-miR-13021......._787
MIMAT0007554gga-miR-16702_.......887
MIMAT0005890hsa-miR-13021......._787
MIMAT0004364ppt-miR8932......._887
MIMAT0027460hsa-miR-6780a-5p1......g.887
MIMAT0027357hsa-miR-6728-5p1......t.887
MIMAT0025801gga-miR-6695-5p1......a.887
MIMAT0027273ppe-miR482b-3p8......a.187
MIMAT0018608ame-miR-37391......g.887
MIMAT0015075hsa-miR-3191-3p1.g......887
MIMAT0009459mmu-miR-1982-5p1......g.887
MIMAT0037076ssc-miR-9857-5p3......__875
MIMAT0036973bta-miR-44496__......175
MIMAT0036736oha-miR-1508......__375
MIMAT0036236chi-miR-450-3p2......__775
MIMAT0035980chi-miR-1508......__375
MIMAT0035727rno-miR-149-3p1__......675
MIMAT0035562dvi-miR-193-5p3......__875
MIMAT0035472sly-miR9477-3p1......__675
MIMAT0035303gsa-miR-184b-3p1__......675
MIMAT0035077efu-miR-1508......__375
MIMAT0034610eca-miR-90651_......_675
MIMAT0034452eca-miR-89241_......_675
MIMAT0034344cfa-miR-88493......__875
MIMAT0034309cfa-miR-88197_......_275
MIMAT0034205gra-miR482c7......__275
MIMAT0034134gra-miR7506b2_......_775
MIMAT0033958esi-miR8623c6_......_175
MIMAT0033852atr-miR85703......__875
MIMAT0033132ppc-miR-8304a-5p2......__775
MIMAT0033130ppc-miR-360-3p8__......375
MIMAT0032383ssa-miR-150-5p8......__375
MIMAT0031826cpa-miR3981__......675
MIMAT0030821prd-miR-7961-3p6_......_175
MIMAT0030413hsa-miR-4433b-5p8_......_375
MIMAT0032251rgl-miR7807a-3p1......__675
MIMAT0030034oar-miR-1508......__375
MIMAT0029426ipu-miR-1508......__375
MIMAT0029372lja-miR75451......__675
MIMAT0028950oan-miR-7404-5p7__......275
MIMAT0028816mdo-miR-7380-5p8_......_375
MIMAT0028812mdo-miR-7378-5p2_......_775
MIMAT0028734mdo-miR-7361-5p1_......_675
MIMAT0028518mdo-miR-92b-5p2__......775
MIMAT0028501mdo-miR-7266-3p1......__675
MIMAT0028169dev-miR-D1-5p1......__675
MIMAT0027876mmu-miR-6987-5p1_......_675
MIMAT0027706mmu-miR-6903-5p1......__675
MIMAT0027528hsa-miR-6814-5p6......__175
MIMAT0025482hsa-miR-6513-5p2......__775
MIMAT0025365ssc-miR-1508......__375
MIMAT0025210ptc-miR64712......__775
MIMAT0025095mmu-miR-63522......__775
MIMAT0031169ppe-miR482c-3p7......__275
MIMAT0024217ggo-miR-1508......__375
MIMAT0024011cgr-miR-92b-5p2__......775
MIMAT0023963cgr-miR-450b-3p3......__875
MIMAT0023680ame-miR-60563__......875
MIMAT0023170gma-miR393b2......__775
MIMAT0022806sha-miR-1508......__375
MIMAT0022584ola-miR-1508......__375
MIMAT0022505mmu-miR-57103......__875
MIMAT0022444ath-miR56662_......_775
MIMAT0022296hsa-miR-5588-3p8_......_375
MIMAT0021784aca-miR-150-5p8......__375
MIMAT0021345mtr-miR5285c1_......_675
MIMAT0021344mtr-miR5285b1_......_675
MIMAT0021343mtr-miR5285a1_......_675
MIMAT0021250mtr-miR2643b-3p2......__775
MIMAT0020638mmu-miR-51278......__375
MIMAT0020523ath-miR50193......__875
MIMAT0021002gma-miR482c-3p7......__275
MIMAT0020180dme-miR-4960-3p2_......_775
MIMAT0020008sko-miR-4817-5p1......__675
MIMAT0019857hsa-miR-4733-5p8......__375
MIMAT0019710hsa-miR-46483_......_875
MIMAT0018968hsa-miR-44496__......175
MIMAT0018940hsa-miR-44253......__875
MIMAT0018240gma-miR43512......__775
MIMAT0018028vvi-miR3630-3p2......__775
MIMAT0016852hsa-miR-42982_......_775
MIMAT0017930aly-miR42413......__875
MIMAT0015895ppy-miR-450b-3p1......__675
MIMAT0015774ppy-miR-1508......__375
MIMAT0015718ssc-miR-450c-3p2......__775
MIMAT0017721aly-miR3444a-5p1......__675
MIMAT0017676aly-miR158b-3p6......__175
MIMAT0017422aly-miR158a-3p6......__175
MIMAT0014919mmu-miR-3100-5p1......__675
MIMAT0014473tgu-miR-29663__......875
MIMAT0015360zma-miR408b-5p3__......875
MIMAT0017380ssc-miR-450b-3p1......__675
MIMAT0017377ssc-miR-92b-5p2__......775
MIMAT0013809osa-miR2863a8_......_375
MIMAT0013221eca-miR-450b-3p1......__675
MIMAT0013011eca-miR-1508......__375
MIMAT0013010eca-miR-1302e1......__675
MIMAT0012748mdo-miR-150-5p8......__375
MIMAT0013548cte-miR-1990c-3p1_......_675
MIMAT0013411mtr-miR2643a2......__775
MIMAT0012429dsi-miR-991-5p7......__275
MIMAT0012277dps-miR-193-5p3......__875
MIMAT0020913dme-miR-2492-5p1......__675
MIMAT0011794bta-miR-22872_......_775
MIMAT0011765zma-miR2118f7......__275
MIMAT0011757osa-miR2118r7......__275
MIMAT0011744osa-miR2118e7......__275
MIMAT0011165mdm-miR482a-3p7......__275
MIMAT0010202hsv2-miR-H32......__775
MIMAT0009426mmu-miR-1955-5p7_......_275
MIMAT0008400hsv1-miR-H3-3p2_......_775
MIMAT0008152ptr-miR-450b1......__675
MIMAT0008044ptr-miR-1508......__375
MIMAT0006602cfa-miR-1508......__375
MIMAT0006334mml-miR-450b-3p1......__675
MIMAT0026878mml-miR-450a-1-3p2......__775
MIMAT0006211mml-miR-150-5p8......__375
MIMAT0026810mml-miR-92b-5p2__......775
MIMAT0007570gga-miR-16833_......_875
MIMAT0007474gga-miR-16081_......_675
MIMAT0007090oan-miR-150-5p8......__375
MIMAT0005758ssy-miR-513c7......__275
MIMAT0017319rno-miR-92b-5p2__......775
MIMAT0020890dme-miR-991-5p8......__375
MIMAT0020849dme-miR-193-5p1......__675
MIMAT0022936mtr-miR393b-3p2......__775
MIMAT0026720hsa-miR-887-5p2......__775
MIMAT0004910hsa-miR-450b-3p1......__675
MIMAT0017278mmu-miR-92b-5p2__......775
MIMAT0003845bta-miR-1508......__375
MIMAT0003606xtr-miR-1508......__375
MIMAT0003901ppt-miR12123_......_875
MIMAT0003512mmu-miR-450b-3p2......__775
MIMAT0004792hsa-miR-92b-5p2__......775
MIMAT0022903ptc-miR171h-5p3......__875
MIMAT0022902ptc-miR171g-5p3......__875
MIMAT0031987dre-miR-204-2-3p3_......_875
MIMAT0001846dre-miR-1508......__375
MIMAT0017183rno-miR-450a-3p3......__875
MIMAT0017182mmu-miR-450a-1-3p2......__775
MIMAT0022700hsa-miR-450a-1-3p2......__775
MIMAT0000853rno-miR-150-5p8......__375
MIMAT0000451hsa-miR-150-5p8......__375
MIMAT0000176ath-miR158a-3p6......__175
MIMAT0000160mmu-miR-150-5p8......__375