VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hvt-miR-h9-5p
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RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tttctcat`	8
MIMAT0012721	hvt-miR-H9-5p	1	`........`	8	100
MIMAT0030383	ptc-miR7824	8	`......._`	2	87
MIMAT0024507	mse-miR-6099	7	`......._`	1	87
MIMAT0022140	osa-miR5507	8	`_.......`	2	87
MIMAT0021603	gma-miR5369	7	`......._`	1	87
MIMAT0020508	dme-miR-4915-5p	8	`......._`	2	87
MIMAT0020466	bfl-miR-4882a	7	`......._`	1	87
MIMAT0018308	gma-miR4393a	7	`......._`	1	87
MIMAT0013684	bmo-miR-2787-3p	7	`......._`	1	87
MIMAT0005113	ppt-miR1026b	7	`......._`	1	87
MIMAT0005112	ppt-miR1026a	7	`......._`	1	87
MIMAT0034227	gra-miR7504m	1	`......c.`	8	87
MIMAT0034226	gra-miR7504l	1	`......c.`	8	87
MIMAT0034225	gra-miR7504k	1	`......c.`	8	87
MIMAT0034068	gra-miR7504f	8	`......c.`	1	87
MIMAT0034067	gra-miR7504e	8	`......c.`	1	87
MIMAT0034044	gra-miR8672	8	`......t.`	1	87
MIMAT0034027	gra-miR7504c	8	`......t.`	1	87
MIMAT0025816	gga-miR-6706-5p	8	`......c.`	1	87
MIMAT0025635	gga-miR-6565-5p	8	`.a......`	1	87
MIMAT0021240	mtr-miR5244	1	`.a......`	8	87
MIMAT0018173	mghv-miR-M1-13-3p	1	`.a......`	8	87
MIMAT0037237	ata-miR9863b-3p	6	`_......_`	1	75
MIMAT0037105	ata-miR9863a-3p	6	`_......_`	1	75
MIMAT0037045	ssc-miR-9827-5p	8	`_......_`	3	75
MIMAT0037004	ssc-miR-9787-3p	7	`......__`	2	75
MIMAT0036729	oha-miR-146b-5p	6	`_......_`	1	75
MIMAT0036567	tch-miR-146a-5p	6	`_......_`	1	75
MIMAT0036387	gma-miR9756	6	`_......_`	1	75
MIMAT0035972	chi-miR-146b-5p	6	`_......_`	1	75
MIMAT0035971	chi-miR-146a	6	`_......_`	1	75
MIMAT0035856	bra-miR400-5p	7	`__......`	2	75
MIMAT0035619	dvi-miR-9538-3p	6	`__......`	1	75
MIMAT0035429	nve-miR-9464	8	`_......_`	3	75
MIMAT0035373	nve-miR-9417	6	`_......_`	1	75
MIMAT0035362	xtr-miR-428b	6	`......__`	1	75
MIMAT0033968	esi-miR8623d	1	`__......`	6	75
MIMAT0033960	esi-miR8623a	1	`__......`	6	75
MIMAT0033889	atr-miR8600	2	`__......`	7	75
MIMAT0033872	atr-miR8586	2	`......__`	7	75
MIMAT0033769	pxy-miR-8527	8	`__......`	3	75
MIMAT0033728	pxy-miR-8508	6	`__......`	1	75
MIMAT0033140	ppc-miR-8307-5p	7	`__......`	2	75
MIMAT0032922	ppc-miR-8234-5p	8	`_......_`	3	75
MIMAT0032666	ssa-miR-7132a-3p	6	`_......_`	1	75
MIMAT0032376	ssa-miR-146d-5p	6	`_......_`	1	75
MIMAT0032374	ssa-miR-146b-5p	6	`_......_`	1	75
MIMAT0032371	ssa-miR-146a-5p	6	`_......_`	1	75
MIMAT0031825	cpa-miR8134	6	`_......_`	1	75
MIMAT0031615	bbe-miR-2058-5p	6	`_......_`	1	75
MIMAT0031613	bbe-miR-2057-5p	6	`_......_`	1	75
MIMAT0030925	stu-miR1886i-5p	6	`__......`	1	75
MIMAT0030847	stu-miR7980a	6	`__......`	1	75
MIMAT0030631	prd-miR-7579-3p	7	`_......_`	2	75
MIMAT0030623	prd-miR-7905-3p	6	`_......_`	1	75
MIMAT0030126	bdi-miR5185k-3p	8	`_......_`	3	75
MIMAT0030124	bdi-miR5185j-3p	8	`_......_`	3	75
MIMAT0030122	bdi-miR5185i-3p	8	`_......_`	3	75
MIMAT0030120	bdi-miR5185h-3p	8	`_......_`	3	75
MIMAT0030118	bdi-miR5185g-3p	8	`_......_`	3	75
MIMAT0030116	bdi-miR5185f-3p	8	`_......_`	3	75
MIMAT0030114	bdi-miR5185e-3p	8	`_......_`	3	75
MIMAT0030112	bdi-miR5185d-3p	8	`_......_`	3	75
MIMAT0030110	bdi-miR5185c-3p	8	`_......_`	3	75
MIMAT0029424	ipu-miR-146b	6	`_......_`	1	75
MIMAT0029423	ipu-miR-146a	6	`_......_`	1	75
MIMAT0028497	mdo-miR-7264-3p	1	`_......_`	6	75
MIMAT0028403	mmu-miR-7217-3p	6	`_......_`	1	75
MIMAT0028266	mml-miR-7166-5p	1	`_......_`	6	75
MIMAT0028216	hsa-miR-7153-5p	6	`_......_`	1	75
MIMAT0026434	sbi-miR6229-5p	2	`_......_`	7	75
MIMAT0026226	ccr-miR-146a	6	`_......_`	1	75
MIMAT0028030	mmu-miR-7063-5p	6	`__......`	1	75
MIMAT0027693	mmu-miR-6896-3p	1	`......__`	6	75
MIMAT0027567	hsa-miR-6833-3p	1	`......__`	6	75
MIMAT0027440	hsa-miR-6770-5p	6	`_......_`	1	75
MIMAT0025399	tgu-miR-1467-5p	1	`_......_`	6	75
MIMAT0025011	hme-miR-6305-3p	8	`_......_`	3	75
MIMAT0024545	cca-miR6108b	6	`_......_`	1	75
MIMAT0024544	cca-miR6108g	6	`_......_`	1	75
MIMAT0024543	cca-miR6108a	6	`_......_`	1	75
MIMAT0027119	mml-miR-514b-5p	1	`_......_`	6	75
MIMAT0024239	ggo-miR-589	6	`_......_`	1	75
MIMAT0024135	ggo-miR-146a	6	`_......_`	1	75
MIMAT0024096	ggo-miR-146b	6	`_......_`	1	75
MIMAT0023775	cgr-miR-146b-5p	6	`_......_`	1	75
MIMAT0023774	cgr-miR-146a	6	`_......_`	1	75
MIMAT0023122	mtr-miR5743b	6	`_......_`	1	75
MIMAT0023121	mtr-miR5743a	6	`_......_`	1	75
MIMAT0022775	sha-miR-340	3	`__......`	8	75
MIMAT0022635	ola-miR-146a-5p	6	`_......_`	1	75
MIMAT0023111	tur-miR-5738-3p	2	`......__`	7	75
MIMAT0022468	hsa-miR-5680	6	`......__`	1	75
MIMAT0032129	ath-miR5663-3p	6	`_......_`	1	75
MIMAT0022334	cin-miR-5604-3p	1	`......__`	6	75
MIMAT0022178	osa-miR5542	8	`_......_`	3	75
MIMAT0022673	aau-miR172	6	`_......_`	1	75
MIMAT0021962	aca-miR-454-5p	7	`_......_`	2	75
MIMAT0021777	aca-miR-146b-5p	6	`_......_`	1	75
MIMAT0021775	aca-miR-146a-5p	6	`_......_`	1	75
MIMAT0021674	gma-miR1513c	7	`__......`	2	75
MIMAT0021612	gma-miR5038b	6	`_......_`	1	75
MIMAT0021558	asu-miR-5350d-5p	3	`......__`	8	75
MIMAT0021552	asu-miR-5350a-5p	3	`......__`	8	75
MIMAT0021309	mtr-miR2590g	8	`__......`	3	75
MIMAT0021246	mtr-miR5250	6	`_......_`	1	75
MIMAT0027087	bdi-miR5185b-3p	8	`_......_`	3	75
MIMAT0027086	bdi-miR5185a-3p	8	`_......_`	3	75
MIMAT0020627	mmu-miR-5119	3	`__......`	8	75
MIMAT0021063	gma-miR5038a	6	`_......_`	1	75
MIMAT0020535	ath-miR5029	7	`__......`	2	75
MIMAT0020525	ath-miR5021	6	`_......_`	1	75
MIMAT0020155	dme-miR-4945-5p	2	`......__`	7	75
MIMAT0020468	bfl-miR-4882c	8	`......__`	3	75
MIMAT0020467	bfl-miR-4882b	7	`......__`	2	75
MIMAT0020002	cel-miR-4814-5p	1	`_......_`	6	75
MIMAT0019819	hsa-miR-4712-3p	7	`__......`	2	75
MIMAT0019478	pma-miR-146-5p	6	`_......_`	1	75
MIMAT0018095	hsa-miR-3672	6	`__......`	1	75
MIMAT0022963	ssc-miR-146a-5p	6	`_......_`	1	75
MIMAT0016883	hsa-miR-4251	8	`_......_`	3	75
MIMAT0017920	aly-miR3444b	2	`__......`	7	75
MIMAT0016760	cin-miR-4155-3p	3	`_......_`	8	75
MIMAT0016717	cin-miR-4003d-3p	6	`_......_`	1	75
MIMAT0016558	cin-miR-4034-3p	3	`......__`	8	75
MIMAT0016358	gso-miR1507b	1	`__......`	6	75
MIMAT0016357	gso-miR1507a	1	`__......`	6	75
MIMAT0016031	ppy-miR-589	6	`_......_`	1	75
MIMAT0015989	ppy-miR-539	7	`......__`	2	75
MIMAT0015768	ppy-miR-146b-5p	6	`_......_`	1	75
MIMAT0015767	ppy-miR-146a	6	`_......_`	1	75
MIMAT0017722	aly-miR3444a-3p	3	`__......`	8	75
MIMAT0017655	aly-miR868-5p	2	`......__`	7	75
MIMAT0017604	aly-miR824-3p	3	`_......_`	8	75
MIMAT0017583	aly-miR400-5p	7	`__......`	2	75
MIMAT0015417	bmo-miR-2808e	6	`_......_`	1	75
MIMAT0015401	bmo-miR-3221	1	`__......`	6	75
MIMAT0015087	hsa-miR-514b-5p	1	`_......_`	6	75
MIMAT0014840	mmu-miR-3067-5p	3	`_......_`	8	75
MIMAT0014609	tgu-miR-146c	6	`_......_`	1	75
MIMAT0014602	tgu-miR-146b-5p	6	`_......_`	1	75
MIMAT0014622	tgu-miR-146a-5p	6	`_......_`	1	75
MIMAT0013167	eca-miR-539	7	`......__`	2	75
MIMAT0013065	eca-miR-146a	6	`_......_`	1	75
MIMAT0012891	eca-miR-146b-5p	6	`_......_`	1	75
MIMAT0012865	hvt-miR-H13	2	`......__`	7	75
MIMAT0012806	ptr-miR-589	6	`_......_`	1	75
MIMAT0012747	mdo-miR-146b-5p	6	`_......_`	1	75
MIMAT0012746	mdo-miR-146a-5p	6	`_......_`	1	75
MIMAT0012417	dps-miR-2573-3p	1	`__......`	6	75
MIMAT0011178	vun-miR1507b	1	`__......`	6	75
MIMAT0010190	ssc-miR-146b	6	`_......_`	1	75
MIMAT0010089	vun-miR1507a	1	`__......`	6	75
MIMAT0010080	gma-miR1507b	1	`__......`	6	75
MIMAT0009984	bfl-miR-2058-5p	6	`_......_`	1	75
MIMAT0009983	bfl-miR-2057	6	`_......_`	1	75
MIMAT0009917	cfa-miR-589	6	`_......_`	1	75
MIMAT0009909	cfa-miR-539	7	`......__`	2	75
MIMAT0009342	bta-miR-539	7	`......__`	2	75
MIMAT0009236	bta-miR-146a	6	`_......_`	1	75
MIMAT0009235	bta-miR-146b	6	`_......_`	1	75
MIMAT0008253	ptr-miR-580	7	`_......_`	2	75
MIMAT0008214	ptr-miR-539	7	`......__`	2	75
MIMAT0008039	ptr-miR-146b	6	`_......_`	1	75
MIMAT0008038	ptr-miR-146a	6	`_......_`	1	75
MIMAT0007822	osa-miR1869	6	`_......_`	1	75
MIMAT0006684	cfa-miR-146a	6	`_......_`	1	75
MIMAT0006667	cfa-miR-146b	6	`_......_`	1	75
MIMAT0015266	cel-miR-1822-5p	3	`......__`	8	75
MIMAT0006449	mml-miR-589	6	`_......_`	1	75
MIMAT0006405	mml-miR-539	7	`......__`	2	75
MIMAT0026879	mml-miR-452-3p	3	`__......`	8	75
MIMAT0006204	mml-miR-146b-5p	6	`_......_`	1	75
MIMAT0006203	mml-miR-146a-5p	6	`_......_`	1	75
MIMAT0007735	gga-miR-146c-5p	6	`_......_`	1	75
MIMAT0007589	gga-miR-1697	2	`__......`	7	75
MIMAT0007365	gma-miR1507a	1	`__......`	6	75
MIMAT0005979	mdv1-miR-M9-5p	2	`......__`	7	75
MIMAT0007230	oan-miR-146a-5p	6	`_......_`	1	75
MIMAT0007007	oan-miR-146b-5p	6	`_......_`	1	75
MIMAT0005789	hsa-miR-513c-5p	1	`_......_`	6	75
MIMAT0005747	age-miR-513c	1	`_......_`	6	75
MIMAT0005702	vvi-miR172d	6	`_......_`	1	75
MIMAT0005595	rno-miR-146b-5p	6	`_......_`	1	75
MIMAT0005563	xtr-miR-146b	6	`_......_`	1	75
MIMAT0004474	mdv2-miR-M28-5p	2	`......__`	7	75
MIMAT0004965	cre-miR908.1	6	`_......_`	1	75
MIMAT0032024	ath-miR824-3p	3	`_......_`	8	75
MIMAT0004241	ath-miR825	1	`_......_`	6	75
MIMAT0015243	bmo-miR-71-3p	1	`_......_`	6	75
MIMAT0012107	sme-miR-71c-3p	1	`__......`	6	75
MIMAT0012106	sme-miR-71a-1-3p	1	`__......`	6	75
MIMAT0003604	xtr-miR-146a	6	`_......_`	1	75
MIMAT0003496	mmu-miR-706	7	`......__`	2	75
MIMAT0003475	mmu-miR-146b-5p	6	`_......_`	1	75
MIMAT0003351	gga-miR-146b-5p	6	`_......_`	1	75
MIMAT0004799	hsa-miR-589-5p	6	`_......_`	1	75
MIMAT0003245	hsa-miR-580-3p	7	`_......_`	2	75
MIMAT0003176	rno-miR-539-5p	7	`......__`	2	75
MIMAT0003169	mmu-miR-539-5p	7	`......__`	2	75
MIMAT0003163	hsa-miR-539-5p	7	`......__`	2	75
MIMAT0002809	hsa-miR-146b-5p	6	`_......_`	1	75
MIMAT0001844	dre-miR-146b	6	`_......_`	1	75
MIMAT0001843	dre-miR-146a	6	`_......_`	1	75
MIMAT0001163	gga-miR-146a-5p	6	`_......_`	1	75
MIMAT0001001	ath-miR400	7	`__......`	2	75
MIMAT0000852	rno-miR-146a-5p	6	`_......_`	1	75
MIMAT0000449	hsa-miR-146a-5p	6	`_......_`	1	75
MIMAT0015119	cel-miR-247-5p	8	`......__`	3	75
MIMAT0000158	mmu-miR-146a-5p	6	`_......_`	1	75