Result for your query miRNA sequence
>hvt-miR-h13
uuucucc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tttctcc7
MIMAT0034227gra-miR7504m1.......7100
MIMAT0034226gra-miR7504l1.......7100
MIMAT0034225gra-miR7504k1.......7100
MIMAT0034068gra-miR7504f8.......2100
MIMAT0034067gra-miR7504e8.......2100
MIMAT0025816gga-miR-6706-5p8.......2100
MIMAT0020467bfl-miR-4882b7.......1100
MIMAT0015989ppy-miR-5397.......1100
MIMAT0013167eca-miR-5397.......1100
MIMAT0012865hvt-miR-H132.......8100
MIMAT0009909cfa-miR-5397.......1100
MIMAT0009342bta-miR-5397.......1100
MIMAT0008214ptr-miR-5397.......1100
MIMAT0006405mml-miR-5397.......1100
MIMAT0005979mdv1-miR-M9-5p2.......8100
MIMAT0003176rno-miR-539-5p7.......1100
MIMAT0003169mmu-miR-539-5p7.......1100
MIMAT0003163hsa-miR-539-5p7.......1100
MIMAT0037242ata-miR164c-5p7_......285
MIMAT0037218ata-miR164b-5p7_......285
MIMAT0037212ata-miR164a-5p7_......285
MIMAT0037210ata-miR395c-5p2_......785
MIMAT0036407ggo-miR-519e-5p1_......685
MIMAT0036405ggo-miR-515-5p1_......685
MIMAT0035870bra-miR164e-5p7_......285
MIMAT0035868bra-miR164c-5p7_......285
MIMAT0035866bra-miR164d-5p7_......285
MIMAT0035864bra-miR164b-5p7_......285
MIMAT0035362xtr-miR-428b6......_185
MIMAT0035118efu-miR-93483_......885
MIMAT0034918efu-miR-92801_......685
MIMAT0034898efu-miR-92683_......885
MIMAT0034044gra-miR86728......_385
MIMAT0034027gra-miR7504c8......_385
MIMAT0033975sly-miR164b-5p7_......285
MIMAT0033973sly-miR164a-5p7_......285
MIMAT0033914atr-miR164b7_......285
MIMAT0033913atr-miR164a7_......285
MIMAT0033719pxy-miR-9657_......285
MIMAT0031795cpa-miR164e7_......285
MIMAT0031794cpa-miR164d7_......285
MIMAT0031793cpa-miR164c7_......285
MIMAT0031792cpa-miR164b7_......285
MIMAT0031791cpa-miR164a7_......285
MIMAT0031444ppe-miR164d7_......285
MIMAT0031443ppe-miR164c7_......285
MIMAT0031442ppe-miR164b7_......285
MIMAT0031441ppe-miR164a7_......285
MIMAT0031235stu-miR164-5p7_......285
MIMAT0030383ptc-miR78248......_385
MIMAT0029191mes-miR164d7_......285
MIMAT0029190mes-miR164c7_......285
MIMAT0029189mes-miR164b7_......285
MIMAT0029188mes-miR164a7_......285
MIMAT0029033gga-miR-7439-3p1_......685
MIMAT0028503mdo-miR-30c-1-3p8_......385
MIMAT0028460mdo-miR-7247-5p7_......285
MIMAT0028285mml-miR-7173-3p7_......285
MIMAT0026090cme-miR164d7_......285
MIMAT0026086cme-miR164c7_......285
MIMAT0025912mdm-miR164f7_......285
MIMAT0025911mdm-miR164e7_......285
MIMAT0025910mdm-miR164d7_......285
MIMAT0025909mdm-miR164c7_......285
MIMAT0025908mdm-miR164b7_......285
MIMAT0025907mdm-miR164a7_......285
MIMAT0027884mmu-miR-6991-5p7_......285
MIMAT0027693mmu-miR-6896-3p1......_685
MIMAT0027656hsa-miR-6878-5p8_......385
MIMAT0027567hsa-miR-6833-3p1......_685
MIMAT0027349cln-miR1647_......285
MIMAT0025715gga-miR-6619-5p7_......285
MIMAT0025653gga-miR-6573-5p7_......285
MIMAT0025625gga-miR-6559-5p8_......385
MIMAT0025502hci-miR164a7_......285
MIMAT0024895gma-miR164k7_......285
MIMAT0024894gma-miR164j7_......285
MIMAT0024893gma-miR164i7_......285
MIMAT0024892gma-miR164h7_......285
MIMAT0024891gma-miR164g7_......285
MIMAT0024890gma-miR164f7_......285
MIMAT0024889gma-miR164e7_......285
MIMAT0024832hvu-miR62047_......285
MIMAT0024648nta-miR164c7_......285
MIMAT0024647nta-miR164b7_......285
MIMAT0024646nta-miR164a7_......285
MIMAT0027227lus-miR164e7_......285
MIMAT0027183lus-miR164d7_......285
MIMAT0027142lus-miR164c7_......285
MIMAT0027138lus-miR164b7_......285
MIMAT0027129lus-miR164a7_......285
MIMAT0024515cca-miR1647_......285
MIMAT0024353mml-miR-519e1_......685
MIMAT0023624bna-miR164d7_......285
MIMAT0023623bna-miR164c7_......285
MIMAT0023622bna-miR164b7_......285
MIMAT0022757vun-miR1647_......285
MIMAT0022508ssl-miR164b7_......285
MIMAT0022507ssl-miR164a7_......285
MIMAT0022496hsa-miR-57037_......285
MIMAT0022468hsa-miR-56806......_185
MIMAT0022334cin-miR-5604-3p1......_685
MIMAT0021558asu-miR-5350d-5p3......_885
MIMAT0021552asu-miR-5350a-5p3......_885
MIMAT0021233mtr-miR52398_......385
MIMAT0027089bdi-miR395e-5p2_......785
MIMAT0020741bdi-miR164f7_......285
MIMAT0020740bdi-miR164e7_......285
MIMAT0022749cme-miR164a7_......285
MIMAT0020728bdi-miR164c-5p7_......285
MIMAT0020693bdi-miR164a-5p7_......285
MIMAT0020669bdi-miR164b7_......285
MIMAT0020561osa-miR50751_......685
MIMAT0020977gma-miR164d7_......285
MIMAT0020976gma-miR164c7_......285
MIMAT0020975gma-miR164b7_......285
MIMAT0020508dme-miR-4915-5p8......_385
MIMAT0020468bfl-miR-4882c8......_385
MIMAT0020382tcc-miR164c7_......285
MIMAT0020381tcc-miR164b7_......285
MIMAT0020380tcc-miR164a7_......285
MIMAT0019820hsa-miR-4713-5p1_......685
MIMAT0019070hsa-miR-45318_......385
MIMAT0019053hsa-miR-45167_......285
MIMAT0018950hsa-miR-44347_......285
MIMAT0018376far-miR164b7_......285
MIMAT0018370far-miR164a7_......285
MIMAT0016558cin-miR-4034-3p3......_885
MIMAT0015943ppy-miR-515-5p1_......685
MIMAT0017779esi-miR3453-5p1_......685
MIMAT0017551aly-miR395d-5p2_......785
MIMAT0017453aly-miR164c-5p7_......285
MIMAT0017451aly-miR164b-5p7_......285
MIMAT0017449aly-miR164a-5p7_......285
MIMAT0014830mmu-miR-3062-5p6_......185
MIMAT0014331ghr-miR1647_......285
MIMAT0014159rco-miR164d7_......285
MIMAT0014158rco-miR164c7_......285
MIMAT0014157rco-miR164b7_......285
MIMAT0014156rco-miR164a7_......285
MIMAT0014080ctr-miR1647_......285
MIMAT0014069csi-miR1647_......285
MIMAT0013985zma-miR164h-5p7_......285
MIMAT0013984zma-miR164g-5p7_......285
MIMAT0013983zma-miR164f-5p7_......285
MIMAT0013982zma-miR164e-5p7_......285
MIMAT0012721hvt-miR-H9-5p1......_685
MIMAT0012375dps-miR-2556-3p3_......885
MIMAT0012081bta-miR-2486-5p6_......185
MIMAT0011947bta-miR-23941_......685
MIMAT0011326sbi-miR164e7_......285
MIMAT0011325sbi-miR164d7_......285
MIMAT0010156bra-miR164a7_......285
MIMAT0015295bmo-miR-965-5p8_......385
MIMAT0009935cfa-miR-2073_......885
MIMAT0015266cel-miR-1822-5p3......_885
MIMAT0031117mml-miR-30c-2-3p8_......385
MIMAT0007460gga-miR-1596-5p2_......785
MIMAT0007354gma-miR164a7_......285
MIMAT0007209oan-miR-14028_......385
MIMAT0005661vvi-miR164d7_......285
MIMAT0005660vvi-miR164c7_......285
MIMAT0005659vvi-miR164b7_......285
MIMAT0005658vvi-miR164a7_......285
MIMAT0005633bna-miR164a7_......285
MIMAT0005346tae-miR1647_......285
MIMAT0011103mtr-miR164d7_......285
MIMAT0011102mtr-miR164c7_......285
MIMAT0011098mtr-miR164b7_......285
MIMAT0011059mtr-miR164a7_......285
MIMAT0004256ath-miR835-3p7_......285
MIMAT0004247ath-miR830-5p3_......885
MIMAT0003298hsa-miR-629-3p2_......785
MIMAT0003115rno-miR-2072_......785
MIMAT0002828hsa-miR-519e-5p1_......685
MIMAT0002826hsa-miR-515-5p1_......685
MIMAT0001923ptc-miR164f7_......285
MIMAT0001922ptc-miR164e7_......285
MIMAT0001921ptc-miR164d7_......285
MIMAT0001920ptc-miR164c7_......285
MIMAT0001919ptc-miR164b7_......285
MIMAT0001918ptc-miR164a7_......285
MIMAT0001754sbi-miR164c7_......285
MIMAT0015166zma-miR395a-5p2_......785
MIMAT0001445sbi-miR164b7_......285
MIMAT0001406sbi-miR164a7_......285
MIMAT0001367zma-miR164c-5p7_......285
MIMAT0001366zma-miR164b-5p7_......285
MIMAT0001365zma-miR164d-5p7_......285
MIMAT0001364zma-miR164a-5p7_......285
MIMAT0026515gga-miR-30c-2-3p8_......385
MIMAT0001089osa-miR164f7_......285
MIMAT0001035osa-miR164e7_......285
MIMAT0001034osa-miR164d7_......285
MIMAT0001033osa-miR164c7_......285
MIMAT0001017ath-miR164c-5p7_......285
MIMAT0000634osa-miR164b7_......285
MIMAT0000633osa-miR164a7_......285
MIMAT0015119cel-miR-247-5p8......_385
MIMAT0000240mmu-miR-2073_......885
MIMAT0000186ath-miR164b-5p7_......285
MIMAT0000185ath-miR164a7_......285