VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>prv-miR-11-1
agaugaac

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`agatgaac`	8
ENST00000604835	ENSG00000270715 transcript	577	`_........`	570	100
ENST00000604835	ENSG00000270715 transcript	57	`__.......`	51	87
ENST00000604835	ENSG00000270715 transcript	523	`_......._`	517	87
ENST00000605246	ENSG00000270715 transcript	70	`_........`	63	100
ENST00000605246	ENSG00000270715 transcript	16	`_......._`	10	87
ENST00000519308	ENSG00000254017 transcript	1187	`_........`	1180	100
ENST00000519308	ENSG00000254017 transcript	682	`__.......`	676	87
ENST00000558023	ENSG00000253692 transcript	70	`_........`	63	100
ENST00000558023	ENSG00000253692 transcript	16	`_......._`	10	87
ENST00000521393	ENSG00000253692 transcript	577	`_........`	570	100
ENST00000521393	ENSG00000253692 transcript	57	`__.......`	51	87
ENST00000521393	ENSG00000253692 transcript	523	`_......._`	517	87
ENST00000594994	ENSG00000268008 transcript	771	`_........`	764	100
ENST00000608599	GRCh37:HG444	491	`_........`	498	100
ENST00000608196	GRCh37:HG444	345	`_........`	352	100
ENST00000610151	ENSG00000273140 transcript	499	`_........`	506	100
ENST00000595540	ENSG00000268185 transcript	1411	`_........`	1418	100
ENST00000595540	ENSG00000268185 transcript	199	`__.......`	205	87
ENST00000595540	ENSG00000268185 transcript	2497	`_......._`	2503	87
ENST00000580144	ENSG00000265609 transcript	1086	`_........`	1093	100
ENST00000580144	ENSG00000265609 transcript	524	`_......._`	530	87
ENST00000583851	ENSG00000264639 transcript	224	`_........`	231	100
ENST00000583851	ENSG00000264639 transcript	2677	`_........`	2684	100
ENST00000583851	ENSG00000264639 transcript	708	`_......._`	714	87
ENST00000583851	ENSG00000264639 transcript	1980	`_......._`	1986	87
ENST00000583851	ENSG00000264639 transcript	3700	`__.......`	3694	87
ENST00000578219	ENSG00000264639 transcript	4	`_........`	11	100
ENST00000578219	ENSG00000264639 transcript	707	`__.......`	701	87
ENST00000582121	ENSG00000265475 transcript	300	`_........`	307	100
ENST00000582121	ENSG00000265475 transcript	111	`_......._`	105	87
ENST00000599294	ENSG00000268345 transcript	1255	`_........`	1262	100
ENST00000595884	ENSG00000269569 transcript	82	`_........`	89	100
ENST00000601598	ENSG00000268727 transcript	220	`_........`	213	100
ENST00000597722	ENSG00000268715 transcript	454	`_........`	461	100
ENST00000597722	ENSG00000268715 transcript	551	`_......._`	557	87
ENST00000595852	ENSG00000267862 transcript	911	`_........`	904	100
ENST00000595852	ENSG00000267862 transcript	421	`_......._`	415	87
ENST00000599869	ENSG00000268294 transcript	824	`_........`	831	100
ENST00000599869	ENSG00000268294 transcript	123	`__.......`	117	87
ENST00000599869	ENSG00000268294 transcript	146	`_......._`	152	87
ENST00000598021	ENSG00000267832 transcript	156	`_........`	163	100
ENST00000598021	ENSG00000267832 transcript	252	`_........`	259	100
ENST00000600488	ENSG00000268437 transcript	3083	`_........`	3090	100
ENST00000600488	ENSG00000268437 transcript	2894	`_......._`	2900	87
ENST00000601819	GRCh37:HG497	270	`_........`	277	100
ENST00000578342	ENSG00000265578 transcript	443	`_........`	450	100
ENST00000578342	ENSG00000265578 transcript	1038	`_........`	1045	100
ENST00000578342	ENSG00000265578 transcript	1615	`_......._`	1609	87
ENST00000578342	ENSG00000265578 transcript	2622	`_......._`	2628	87
ENST00000573748	ENSG00000262461 transcript	2797	`_........`	2804	100
ENST00000573748	ENSG00000262461 transcript	849	`_......._`	855	87
ENST00000576332	ENSG00000262461 transcript	2619	`_........`	2626	100
ENST00000576332	ENSG00000262461 transcript	849	`_......._`	855	87
ENST00000582652	ENSG00000265397 transcript	567	`_........`	574	100
ENST00000582652	ENSG00000265397 transcript	21	`_......._`	27	87
ENST00000578771	ENSG00000265397 transcript	403	`_........`	410	100
ENST00000577453	ENSG00000264651 transcript	499	`_........`	506	100
ENST00000577453	ENSG00000264651 transcript	1094	`_........`	1101	100
ENST00000577453	ENSG00000264651 transcript	1671	`_......._`	1665	87
ENST00000577453	ENSG00000264651 transcript	2471	`_......._`	2477	87
ENST00000605474	ENSG00000271668 transcript	84	`_........`	91	100
ENST00000511122	ENSG00000251038 transcript	36	`_........`	43	100
ENST00000426076	ENSG00000229658 transcript	520	`_........`	527	100
ENST00000420638	ENSG00000223875 transcript	26	`_........`	33	100
ENST00000545636	ENSG00000233614 transcript	251	`_........`	244	100
ENST00000513886	GRCh37:16:61555:64090:1	249	`_........`	242	100
ENST00000545655	ENSG00000180068 transcript	656	`_........`	649	100
ENST00000323164	ENSG00000180068 transcript	589	`_........`	582	100
ENST00000573378	ENSG00000263283 transcript	1121	`_........`	1128	100
ENST00000573378	ENSG00000263283 transcript	358	`_......._`	364	87
ENST00000573378	ENSG00000263283 transcript	388	`__.......`	382	87
ENST00000573378	ENSG00000263283 transcript	1206	`_......._`	1212	87
ENST00000358446	ENSG00000196737 transcript	1683	`_........`	1690	100
ENST00000358446	ENSG00000196737 transcript	160	`_......._`	154	87
ENST00000431453	GRCh37:7:6777266:6786736:1	279	`_........`	286	100
ENST00000403974	ENSG00000187953 transcript	923	`_........`	930	100
ENST00000403974	ENSG00000187953 transcript	1290	`__.......`	1296	87
ENST00000403974	ENSG00000187953 transcript	1417	`_......._`	1423	87
ENST00000486256	GRCh37:7:6749759:6793493:1	1671	`_........`	1678	100
ENST00000486256	GRCh37:7:6749759:6793493:1	2038	`__.......`	2044	87
ENST00000486256	GRCh37:7:6749759:6793493:1	2165	`_......._`	2171	87
ENST00000486256	GRCh37:7:6749759:6793493:1	2787	`_......._`	2781	87
ENST00000471244	GRCh37:7:5033140:5037798:1	1194	`_........`	1201	100
ENST00000471244	GRCh37:7:5033140:5037798:1	1596	`_......._`	1590	87
ENST00000582128	ENSG00000265973 transcript	649	`_........`	642	100
ENST00000583605	ENSG00000266695 transcript	36	`_........`	43	100
ENST00000581685	ENSG00000266488 transcript	1817	`_........`	1824	100
ENST00000581685	ENSG00000266488 transcript	405	`__.......`	399	87
ENST00000581685	ENSG00000266488 transcript	1528	`_......._`	1534	87
ENST00000418950	ENSG00000227775 transcript	17	`_........`	24	100
ENST00000424604	GRCh37:1:1663993:1667414:1	308	`_........`	315	100
ENST00000577672	GRCh37:1:1655951:1667412:1	269	`_........`	276	100
ENST00000597891	ENSG00000269227 transcript	23	`_........`	30	100
ENST00000518655	ENSG00000223972 transcript	249	`_........`	242	100
ENST00000518655	ENSG00000223972 transcript	132	`_......._`	126	87
ENST00000515242	ENSG00000223972 transcript	251	`_........`	244	100
ENST00000515242	ENSG00000223972 transcript	134	`_......._`	128	87
ENST00000456328	GRCh37:1:11869:14409:1	254	`_........`	247	100
ENST00000456328	GRCh37:1:11869:14409:1	137	`_......._`	131	87
ENST00000521068	ENSG00000256667 transcript	638	`_........`	645	100
ENST00000521068	ENSG00000256667 transcript	151	`_......._`	157	87
ENST00000341141	ENSG00000256667 transcript	852	`_........`	859	100
ENST00000341141	ENSG00000256667 transcript	1309	`_........`	1316	100
ENST00000341141	ENSG00000256667 transcript	365	`_......._`	371	87
ENST00000503499	ENSG00000256667 transcript	628	`_........`	635	100
ENST00000503499	ENSG00000256667 transcript	51	`_......._`	57	87
ENST00000535939	GRCh37:12:10741772:10752164:-1	672	`_........`	679	100
ENST00000535939	GRCh37:12:10741772:10752164:-1	1129	`_........`	1136	100
ENST00000535939	GRCh37:12:10741772:10752164:-1	95	`_......._`	101	87