Predicted targets for your query miRNA sequence
>rrv-miR-rr1-6-3p
cgauguac
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap
Acc numberGeneStartAlignmentEnd% Identity
Query1cgatgtac8
ENST00000600488ENSG00000268437 transcript 125........118100
ENST00000600488ENSG00000268437 transcript 1854_.......186087
ENST00000600248ENSG00000268956 transcript 163........156100
ENST00000576259GRCh37:HG1257 83........90100
ENST00000576259GRCh37:HG1257 220........213100
ENST00000576727GRCh37:HG1257 220........227100
ENST00000576727GRCh37:HG1257 474........467100
ENST00000576379GRCh37:HG1257 213........220100
ENST00000576379GRCh37:HG1257 350........343100
ENST00000609387ENSG00000263067 transcript 127........120100
ENST00000457631ENSG00000263067 transcript 215........222100
ENST00000457631ENSG00000263067 transcript 352........345100
ENST00000456236ENSG00000263067 transcript 215........222100
ENST00000456236ENSG00000263067 transcript 352........345100
ENST00000573109GRCh37:HG1257 216........223100
ENST00000573109GRCh37:HG1257 353........346100
ENST00000570348GRCh37:HG1257 19........26100
ENST00000570348GRCh37:HG1257 156........149100
ENST00000582807ENSG00000266161 transcript 141........134100
ENST00000539660ENSG00000270063 transcript 246........253100
ENST00000562643ENSG00000260993 transcript 262........255100
ENST00000564756GRCh37:HG115 512........519100
ENST00000562766GRCh37:HG115 399........406100
ENST00000563165ENSG00000261518 transcript 258........251100
ENST00000496207ENSG00000205897 transcript 882........889100
ENST00000460237ENSG00000242058 transcript 327........320100
ENST00000402340ENSG00000174678 transcript 125........118100
ENST00000402340ENSG00000174678 transcript 1854_.......186087
ENST00000598153ENSG00000269761 transcript 551........558100
ENST00000428988ENSG00000229959 transcript 141........134100
ENST00000547782ENSG00000236033 transcript 246........253100
ENST00000413313ENSG00000236033 transcript 246........253100
ENST00000413313ENSG00000236033 transcript 746......._74087
ENST00000494226ENSG00000242326 transcript 24........17100
ENST00000435780ENSG00000232708 transcript 141........134100
ENST00000428321ENSG00000231941 transcript 246........253100
ENST00000428321ENSG00000231941 transcript 746......._74087
ENST00000497800ENSG00000214903 transcript 237........244100
ENST00000418780ENSG00000232331 transcript 141........134100
ENST00000435665ENSG00000227956 transcript 248........255100
ENST00000464884ENSG00000242537 transcript 1163........1156100
ENST00000567861ENSG00000260639 transcript 288........295100
ENST00000583878ENSG00000264562 transcript 151........158100
ENST00000564116ENSG00000261375 transcript 8........1100
ENST00000564693ENSG00000260784 transcript 10........3100
ENST00000431496ENSG00000256951 transcript 151........144100
ENST00000430589GRCh37:15:29033389:29034538:1 852........845100
ENST00000467614ENSG00000230626 transcript 388........381100
ENST00000455932ENSG00000233964 transcript 141........134100
ENST00000421242ENSG00000231287 transcript 246........253100
ENST00000436837ENSG00000205583 transcript 214........221100
ENST00000436837ENSG00000205583 transcript 351........344100
ENST00000338421ENSG00000205583 transcript 214........221100
ENST00000338421ENSG00000205583 transcript 351........344100
ENST00000339898ENSG00000205583 transcript 214........221100
ENST00000339898ENSG00000205583 transcript 351........344100
ENST00000456374ENSG00000205583 transcript 127........120100
ENST00000402225GRCh37:7:74988448:75024642:1 221........228100
ENST00000402225GRCh37:7:74988448:75024642:1 358........351100
ENST00000458160ENSG00000230856 transcript 151........144100
ENST00000558417ENSG00000259425 transcript 554........547100
ENST00000419998ENSG00000226138 transcript 223........216100
ENST00000549557ENSG00000226138 transcript 211........204100
ENST00000546905ENSG00000258065 transcript 1299........1292100
ENST00000506556ENSG00000248711 transcript 1304........1311100
ENST00000429726ENSG00000160828 transcript 213........220100
ENST00000429726ENSG00000160828 transcript 350........343100
ENST00000359898ENSG00000160828 transcript 169........176100
ENST00000359898ENSG00000160828 transcript 306........299100
ENST00000380775ENSG00000160828 transcript 157........164100
ENST00000380775ENSG00000160828 transcript 294........287100
ENST00000470380GRCh37:7:74299901:74306687:-1 169........176100
ENST00000470380GRCh37:7:74299901:74306687:-1 306........299100
ENST00000423186GRCh37:7:74299873:74306687:-1 169........176100
ENST00000423186GRCh37:7:74299873:74306687:-1 423........416100
ENST00000448772ENSG00000160828 transcript 127........120100
ENST00000568957ENSG00000260727 transcript 442........435100
ENST00000569310ENSG00000261528 transcript 335........328100
ENST00000506558ENSG00000229018 transcript 163........156100
ENST00000458402ENSG00000226948 transcript 338........331100
ENST00000426587ENSG00000174353 transcript 215........222100
ENST00000426587ENSG00000174353 transcript 352........345100
ENST00000308103ENSG00000174353 transcript 215........222100
ENST00000308103ENSG00000174353 transcript 352........345100
ENST00000569650GRCh37:7:72469016:72476308:-1 83........90100
ENST00000569650GRCh37:7:72469016:72476308:-1 220........213100
ENST00000423834GRCh37:7:72469013:72476445:-1 220........227100
ENST00000423834GRCh37:7:72469013:72476445:-1 474........467100
ENST00000448173GRCh37:7:72469007:72476438:-1 213........220100
ENST00000448173GRCh37:7:72469007:72476438:-1 350........343100
ENST00000608210ENSG00000174353 transcript 127........120100
ENST00000428423GRCh37:7:72467582:72476441:-1 216........223100
ENST00000428423GRCh37:7:72467582:72476441:-1 353........346100
ENST00000436857GRCh37:7:72440227:72476244:-1 19........26100
ENST00000436857GRCh37:7:72440227:72476244:-1 156........149100
ENST00000548943ENSG00000257611 transcript 462........469100
ENST00000548943ENSG00000257611 transcript 1781_.......178787
ENST00000553010ENSG00000258186 transcript 442........435100
ENST00000435197GRCh37:16:21513410:21531331:-1 87........80100
ENST00000437413GRCh37:16:21490866:21531500:-1 256........249100
ENST00000522841GRCh37:16:21474526:21531765:-1 521........514100
ENST00000472361GRCh37:7:66767646:66774702:1 97........104100
ENST00000472361GRCh37:7:66767646:66774702:1 787_.......78187
ENST00000416602GRCh37:7:66767608:66786513:1 135........142100
ENST00000416602GRCh37:7:66767608:66786513:1 467_.......46187
ENST00000412466ENSG00000067601 transcript 153........146100
ENST00000547785ENSG00000257884 transcript 1192........1199100
ENST00000526402ENSG00000213697 transcript 166........173100
ENST00000469064ENSG00000186008 transcript 335........328100
ENST00000603814ENSG00000186008 transcript 335........328100
ENST00000440936ENSG00000224411 transcript 853........846100
ENST00000530115ENSG00000224411 transcript 853........846100
ENST00000426478ENSG00000239486 transcript 262........255100
ENST00000492837GRCh37:7:102004745:102021078:1 512........519100
ENST00000484974GRCh37:7:102004609:102021080:1 399........406100
ENST00000433904ENSG00000170409 transcript 258........251100
ENST00000356555ENSG00000197083 transcript 1739........1746100
ENST00000356555ENSG00000197083 transcript 1709_.......170387
ENST00000356555ENSG00000197083 transcript 1793_.......178787
ENST00000520773GRCh37:5:150310207:150324621:-1 2914........2921100
ENST00000520773GRCh37:5:150310207:150324621:-1 2884_.......287887
ENST00000520773GRCh37:5:150310207:150324621:-1 2968_.......296287
ENST00000456437ENSG00000238105 transcript 302........295100
ENST00000266746ENSG00000238105 transcript 1960........1953100
ENST00000537988GRCh37:12:100550217:100556612:-1 4566........4559100
ENST00000545820GRCh37:12:100550195:100555428:-1 4149........4142100
ENST00000397112GRCh37:12:100550190:100567437:-1 1905........1898100
ENST00000304813GRCh37:12:100550135:100555056:-1 2323........2316100
ENST00000555790ENSG00000258734 transcript 251........258100
ENST00000443759ENSG00000242294 transcript 106........99100
ENST00000493499GRCh37:7:99935800:99947781:1 129........122100
ENST00000488972GRCh37:7:99934035:99947377:1 348........341100
ENST00000422479GRCh37:7:99933748:99938951:1 86........93100
ENST00000422479GRCh37:7:99933748:99938951:1 223........216100
ENST00000414292GRCh37:7:99933748:99936613:1 86........93100
ENST00000414292GRCh37:7:99933748:99936613:1 340........333100
ENST00000473757GRCh37:7:99933702:99949523:1 132........139100
ENST00000473757GRCh37:7:99933702:99949523:1 269........262100
ENST00000508013ENSG00000251354 transcript 328........321100
ENST00000506637ENSG00000232327 transcript 1496........1503100
ENST00000506637ENSG00000232327 transcript 2525......._251987
ENST00000555466ENSG00000258836 transcript 205........198100
ENST00000402643ENSG00000216624 transcript 285........278100
ENST00000509460GRCh37:22:25851763:25916821:1 120........127100
ENST00000354451GRCh37:22:25851685:25907595:1 198........205100
ENST00000415709ENSG00000100058 transcript 204........211100
ENST00000382734GRCh37:22:25844072:25857645:1 384........391100
ENST00000495197ENSG00000226086 transcript 254........261100
ENST00000431037ENSG00000078319 transcript 249........242100
ENST00000512854ENSG00000205976 transcript 585........578100
ENST00000610280ENSG00000272900 transcript 541........548100
ENST00000457237ENSG00000235444 transcript 154........147100
ENST00000430151ENSG00000230795 transcript 141........134100
ENST00000450128ENSG00000227262 transcript 246........253100
ENST00000450128ENSG00000227262 transcript 746......._74087
ENST00000431463ENSG00000224526 transcript 141........134100
ENST00000550894ENSG00000220391 transcript 488........495100
ENST00000550894ENSG00000220391 transcript 988......._98287
ENST00000406611ENSG00000220391 transcript 246........253100
ENST00000406611ENSG00000220391 transcript 746......._74087
ENST00000506915ENSG00000205100 transcript 869........862100
ENST00000514420GRCh37:4:69049896:69051921:-1 147........140100
ENST00000514420GRCh37:4:69049896:69051921:-1 137_.......14387
ENST00000513714GRCh37:4:69049847:69051871:-1 97........90100
ENST00000513714GRCh37:4:69049847:69051871:-1 87_.......9387
ENST00000514295ENSG00000250026 transcript 1157........1150100
ENST00000514295ENSG00000250026 transcript 182_.......17687
ENST00000514295ENSG00000250026 transcript 1147_.......115387
ENST00000412176ENSG00000229106 transcript 304........297100
ENST00000503096ENSG00000250536 transcript 1063........1070100
ENST00000331747ENSG00000185031 transcript 419........412100
ENST00000413008ENSG00000230948 transcript 782........775100
ENST00000413008ENSG00000230948 transcript 569_.......57587
ENST00000394500ENSG00000213492 transcript 622........629100
ENST00000441170GRCh37:4:118495667:118497329:-1 687........694100
ENST00000477670ENSG00000244073 transcript 335........328100
ENST00000460082ENSG00000244331 transcript 13........6100
ENST00000436135ENSG00000231434 transcript 853........846100
ENST00000423569ENSG00000227949 transcript 115........108100
ENST00000421439ENSG00000235683 transcript 1133........1140100
ENST00000519737ENSG00000254013 transcript 383........376100
ENST00000451069ENSG00000213556 transcript 151........144100
ENST00000416241ENSG00000237121 transcript 974........967100
ENST00000398541ENSG00000214541 transcript 338........331100
ENST00000442109ENSG00000231741 transcript 666........659100
ENST00000472805ENSG00000215452 transcript 746........739100
ENST00000400371GRCh37:20:45042867:45087915:-1 1540........1533100
ENST00000416030ENSG00000221844 transcript 807........800100
ENST00000416030ENSG00000221844 transcript 827........834100
ENST00000416030ENSG00000221844 transcript 435......._42987
ENST00000457251ENSG00000235485 transcript 2088........2081100
ENST00000457251ENSG00000235485 transcript 127_.......12187
ENST00000437770ENSG00000232816 transcript 141........134100
ENST00000547059ENSG00000226563 transcript 246........253100
ENST00000453494ENSG00000226563 transcript 246........253100
ENST00000560385ENSG00000259419 transcript 362........369100
ENST00000457751ENSG00000225253 transcript 291........284100
ENST00000433704ENSG00000224117 transcript 985........992100
ENST00000433704ENSG00000224117 transcript 472_.......46687
ENST00000593794GRCh37:HG1497 1194........1201100
ENST00000593794GRCh37:HG1497 1577......._157187
ENST00000596301GRCh37:HG1497 1190........1197100
ENST00000596301GRCh37:HG1497 1573......._156787
ENST00000596917GRCh37:HG1497 1171........1178100
ENST00000596917GRCh37:HG1497 1554......._154887
ENST00000600901GRCh37:HG1497 689........696100
ENST00000600901GRCh37:HG1497 1072......._106687
ENST00000587115GRCh37:HSCHR18 1298........1291100
ENST00000587115GRCh37:HSCHR18 1408_.......140287
ENST00000587800GRCh37:HSCHR18 1282........1275100
ENST00000587800GRCh37:HSCHR18 1392_.......138687
ENST00000576626GRCh37:HSCHR18 1346........1339100
ENST00000576626GRCh37:HSCHR18 1456_.......145087
ENST00000607962GRCh37:HG745 1632........1625100
ENST00000609110GRCh37:HG745 1252........1245100
ENST00000562697GRCh37:HG745 1320........1313100
ENST00000608036GRCh37:HG1350 1268........1261100
ENST00000608036GRCh37:HG1350 989_.......98387
ENST00000609917GRCh37:HG1350 1043........1036100
ENST00000609917GRCh37:HG1350 764_.......75887
ENST00000607949GRCh37:HG1350 1316........1309100
ENST00000607949GRCh37:HG1350 1037_.......103187
ENST00000608156GRCh37:HG1350 1008........1001100
ENST00000608156GRCh37:HG1350 729_.......72387
ENST00000608613GRCh37:HG174 144........137100
ENST00000608327GRCh37:HG174 355........348100
ENST00000609409GRCh37:HG174 421........414100
ENST00000608099GRCh37:HG174 1939........1932100
ENST00000608911GRCh37:HG174 3213........3206100
ENST00000609676GRCh37:HG174 516........509100
ENST00000610174GRCh37:HG174 2485........2478100
ENST00000607909GRCh37:HG174 2714........2707100
ENST00000609968GRCh37:HG174 2912........2905100
ENST00000609956GRCh37:HG174 2897........2890100
ENST00000608848GRCh37:HG174 2724........2717100
ENST00000607324GRCh37:HG357 767........760100
ENST00000607324GRCh37:HG357 1068_.......107487
ENST00000607846GRCh37:HG357 759........752100
ENST00000607442GRCh37:HG357 766........759100
ENST00000604741GRCh37:HG1592 551........544100
ENST00000604198GRCh37:HG1592 658........651100
ENST00000603377GRCh37:HG1592 2166........2159100
ENST00000603567GRCh37:HG1592 1866........1859100
ENST00000605420GRCh37:HG1592 2111........2104100
ENST00000605802GRCh37:HG1592 2111........2104100
ENST00000605817GRCh37:HG1592 2428........2421100
ENST00000605330GRCh37:HG1592 2198........2191100
ENST00000602228GRCh37:HG1462 170........163100
ENST00000594916GRCh37:HG1462 174........167100
ENST00000596198GRCh37:HG1462 174........167100
ENST00000598208GRCh37:HG329 468........461100
ENST00000596896GRCh37:HG329 346........339100
ENST00000593304GRCh37:HG329 446........439100
ENST00000594867GRCh37:HG329 468........461100
ENST00000595426GRCh37:HG329 310........303100
ENST00000599450GRCh37:HG329 567........560100
ENST00000593536GRCh37:HG329 530........523100
ENST00000576458GRCh37:HG1257 237........244100
ENST00000572070GRCh37:HG305 771........778100
ENST00000572070GRCh37:HG305 438......._44487
ENST00000571284GRCh37:HG305 800........807100
ENST00000571284GRCh37:HG305 467......._47387
ENST00000585473GRCh37:HG280 1386........1379100
ENST00000574833GRCh37:HG280 1383........1376100
ENST00000570313GRCh37:HG280 1386........1379100
ENST00000570568GRCh37:HG280 1386........1379100
ENST00000571849GRCh37:HG414 966........959100
ENST00000575980GRCh37:HG414 918........911100
ENST00000576665GRCh37:HG414 918........911100
ENST00000571155GRCh37:HG414 924........917100
ENST00000446188GRCh37:1:201979772:201982325:1 121........128100
ENST00000498017GRCh37:1:201979753:201980936:1 140........147100
ENST00000495848GRCh37:1:201979722:201981699:1 171........178100
ENST00000367283GRCh37:1:201979715:201985137:1 292........299100
ENST00000367283GRCh37:1:201979715:201985137:1 1857_.......186387
ENST00000367284GRCh37:1:201979645:201986316:1 248........255100
ENST00000367284GRCh37:1:201979645:201986316:1 1813_.......181987
ENST00000359651GRCh37:1:201977073:201985137:1 3242........3249100
ENST00000359651GRCh37:1:201977073:201985137:1 296_.......29087
ENST00000359651GRCh37:1:201977073:201985137:1 4807_.......481387
ENST00000552721GRCh37:HSCHR6 2416........2409100
ENST00000553015GRCh37:HSCHR6 2645........2638100
ENST00000485552GRCh37:HSCHR6 364........357100
ENST00000416487GRCh37:HSCHR6 688........681100
ENST00000400410GRCh37:HSCHR6 2524........2517100
ENST00000400411GRCh37:HSCHR6 2370........2363100
ENST00000468225GRCh37:HSCHR6 2280........2273100
ENST00000259875GRCh37:HSCHR6 2537........2530100
ENST00000400414GRCh37:HSCHR6 2660........2653100
ENST00000383377GRCh37:HSCHR6 2663........2656100
ENST00000377238GRCh37:10:20332249:20569286:1 347........340100
ENST00000377238GRCh37:10:20332249:20569286:1 475_.......46987
ENST00000377252GRCh37:10:20105168:20578785:1 1413........1406100
ENST00000377252GRCh37:10:20105168:20578785:1 1541_.......153587
ENST00000377242GRCh37:10:20105168:20569286:1 1266........1259100
ENST00000377242GRCh37:10:20105168:20569286:1 1394_.......138887
ENST00000587914GRCh37:17:42940121:42941430:-1 8........15100
ENST00000587914GRCh37:17:42940121:42941430:-1 435_.......44187
ENST00000431443GRCh37:12:109826524:109886176:1 2014........2007100
ENST00000310903GRCh37:12:109785708:109886176:1 2090........2083100
ENST00000417584GRCh37:1:182350840:182360539:-1 1054........1047100
ENST00000311223GRCh37:1:182350840:182361341:-1 1708........1701100
ENST00000461447GRCh37:1:182353550:182355074:-1 388........381100
ENST00000463851GRCh37:1:182353331:182360894:-1 419........412100
ENST00000339526GRCh37:1:182352029:182360927:-1 2120........2113100
ENST00000491322GRCh37:1:182352029:182359439:-1 4310........4303100
ENST00000491322GRCh37:1:182352029:182359439:-1 2436_.......244287
ENST00000331872GRCh37:1:182350839:182361341:-1 1352........1345100
ENST00000439320GRCh37:3:196750725:196756658:-1 559........566100
ENST00000296351GRCh37:3:196745824:196756662:-1 563........570100
ENST00000296350GRCh37:3:196728611:196756687:-1 588........595100
ENST00000497360GRCh37:17:42334561:42345492:-1 1601........1594100
ENST00000262418GRCh37:17:42325753:42345509:-1 1618........1611100
ENST00000261400GRCh37:12:108523511:108644311:1 1138........1131100
ENST00000549903GRCh37:12:108589610:108643896:1 394........387100
ENST00000332082GRCh37:12:108525528:108644314:1 1212........1205100
ENST00000551638GRCh37:12:108523583:108620792:1 133........126100
ENST00000547525GRCh37:12:108523248:108643896:1 1401........1394100
ENST00000367921GRCh37:1:162602260:162750211:1 2384........2391100
ENST00000367922GRCh37:1:162602255:162757190:1 2469........2476100
ENST00000393560GRCh37:7:107599951:107643632:-1 1352........1359100
ENST00000222399GRCh37:7:107564263:107643700:-1 1420........1427100
ENST00000393561GRCh37:7:107564248:107642472:-1 1446........1453100
ENST00000392411GRCh37:17:79008950:79089778:1 438........431100
ENST00000416299GRCh37:17:79071918:79082627:1 85........78100
ENST00000576756GRCh37:17:79071379:79078366:1 125........118100
ENST00000574027GRCh37:17:79061292:79077396:1 363........356100
ENST00000575841GRCh37:17:79060261:79084312:1 127........120100
ENST00000576225GRCh37:17:79058895:79090024:1 776........769100
ENST00000577097GRCh37:17:79057367:79077547:1 622........615100
ENST00000576364GRCh37:17:79037540:79073880:1 396........389100
ENST00000574804GRCh37:17:79031544:79077379:1 407........400100
ENST00000573677GRCh37:17:79031534:79077374:1 427........420100
ENST00000572073GRCh37:17:79031415:79077720:1 400........393100
ENST00000573659GRCh37:17:79031136:79073755:1 557........550100
ENST00000575958GRCh37:17:79030162:79073819:1 482........475100
ENST00000572918GRCh37:17:79027162:79073825:1 535........528100
ENST00000573017GRCh37:17:79027162:79073777:1 531........524100
ENST00000321300GRCh37:17:79008962:79091232:1 589........582100
ENST00000435091GRCh37:17:79008962:79090024:1 589........582100
ENST00000575245GRCh37:17:79008958:79090025:1 692........685100
ENST00000575712GRCh37:17:79008956:79083187:1 595........588100
ENST00000428708GRCh37:17:79008951:79090025:1 600........593100
ENST00000572329GRCh37:17:79008951:79083172:1 689........682100
ENST00000321280GRCh37:17:79008951:79083038:1 600........593100
ENST00000468705GRCh37:7:99073863:99077526:1 267........274100
ENST00000465438GRCh37:7:99070558:99079949:1 1613........1620100
ENST00000379724GRCh37:7:99070535:99079945:1 249........256100
ENST00000447047GRCh37:7:99070534:99084277:1 333........340100
ENST00000493485GRCh37:7:99070516:99101273:1 351........358100
ENST00000488485GRCh37:7:99070515:99078924:1 269........276100
ENST00000448667GRCh37:7:99070513:99084423:1 354........361100
ENST00000481472GRCh37:7:99070513:99081769:1 193........200100
ENST00000483089GRCh37:7:99070513:99079949:1 354........361100
ENST00000331410GRCh37:7:99070464:99085217:1 320........327100
ENST00000529945GRCh37:1:144897997:144932148:-1 6864........6871100
ENST00000497610GRCh37:3:111805285:111828675:1 390........383100
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