Predicted targets for your query miRNA sequence
>hsv2-miR-h9-5p
cucggagg
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberGeneStartAlignmentEnd% Identity
Query1ctcggagg8
ENST00000574221ENSG00000262486 transcript 852_........845100
ENST00000572797GRCh37:HSCHR19LRC 1375_........1368100
ENST00000572306ENSG00000262604 transcript 844_........837100
ENST00000572306ENSG00000262604 transcript 395__.......38987
ENST00000570800ENSG00000263066 transcript 852_........845100
ENST00000573118GRCh37:HSCHR19LRC 1375_........1368100
ENST00000571683ENSG00000263221 transcript 844_........837100
ENST00000571683ENSG00000263221 transcript 395__.......38987
ENST00000576525ENSG00000262586 transcript 247_........240100
ENST00000572299ENSG00000262548 transcript 852_........845100
ENST00000577002GRCh37:HSCHR19LRC 1375_........1368100
ENST00000574663ENSG00000263251 transcript 844_........837100
ENST00000574663ENSG00000263251 transcript 395__.......38987
ENST00000570660ENSG00000262422 transcript 247_........240100
ENST00000601316ENSG00000273022 transcript 179_........172100
ENST00000601316ENSG00000273022 transcript 743_......._73787
ENST00000601944ENSG00000273041 transcript 179_........172100
ENST00000601944ENSG00000273041 transcript 743_......._73787
ENST00000597568ENSG00000269475 transcript 328_........321100
ENST00000597568ENSG00000269475 transcript 475_........468100
ENST00000594994ENSG00000268008 transcript 74_........67100
ENST00000594994ENSG00000268008 transcript 131_......._12587
ENST00000594994ENSG00000268008 transcript 692_......._68687
ENST00000609483GRCh37:HG1350 471_........464100
ENST00000606075ENSG00000272245 transcript 937_........930100
ENST00000607301GRCh37:HG1074 1843_........1836100
ENST00000603348ENSG00000271516 transcript 852_........845100
ENST00000605768GRCh37:HG1079 1375_........1368100
ENST00000605622ENSG00000270319 transcript 844_........837100
ENST00000605622ENSG00000270319 transcript 395__.......38987
ENST00000605827ENSG00000270687 transcript 247_........240100
ENST00000600401ENSG00000267899 transcript 4638_........4631100
ENST00000600401ENSG00000267899 transcript 464_......._45887
ENST00000600401ENSG00000267899 transcript 1158_......._115287
ENST00000597722ENSG00000268715 transcript 39_........46100
ENST00000601819GRCh37:HG497 31_........24100
ENST00000576264GRCh37:HG1257 933_........940100
ENST00000577117GRCh37:HG1257 3890_........3897100
ENST00000577117GRCh37:HG1257 1593_......._158787
ENST00000582109ENSG00000265578 transcript 182_........175100
ENST00000578342ENSG00000265578 transcript 1719_........1712100
ENST00000575155ENSG00000262295 transcript 337_........330100
ENST00000580610ENSG00000264651 transcript 181_........174100
ENST00000583082GRCh37:HG1211 296_........289100
ENST00000577453ENSG00000264651 transcript 1775_........1768100
ENST00000366373ENSG00000203562 transcript 270_........263100
ENST00000451056ENSG00000108958 transcript 46_........39100
ENST00000435243ENSG00000224338 transcript 441_........434100
ENST00000331998ENSG00000183935 transcript 541_........534100
ENST00000442987ENSG00000233750 transcript 3428_........3421100
ENST00000537614ENSG00000257016 transcript 56_........49100
ENST00000430708ENSG00000230535 transcript 509_........516100
ENST00000572620ENSG00000262250 transcript 432_........439100
ENST00000572620ENSG00000262250 transcript 1318_......._132487
ENST00000574869ENSG00000262353 transcript 121_........114100
ENST00000577130ENSG00000262627 transcript 410_........417100
ENST00000577130ENSG00000262627 transcript 1294_......._130087
ENST00000423021ENSG00000236567 transcript 290_........297100
ENST00000423021ENSG00000236567 transcript 1861__.......186787
ENST00000450880ENSG00000233442 transcript 562_........569100
ENST00000450880ENSG00000233442 transcript 937_......._93187
ENST00000344693GRCh37:21:15316090:15352758:-1 226_........219100
ENST00000344693GRCh37:21:15316090:15352758:-1 305__.......31187
ENST00000311003ENSG00000173231 transcript 228_........235100
ENST00000400754ENSG00000188681 transcript 224_........217100
ENST00000559466ENSG00000188681 transcript 842_........835100
ENST00000416067GRCh37:21:9907194:9968585:-1 261_........254100
ENST00000580065ENSG00000266522 transcript 465_........458100
ENST00000592985ENSG00000267324 transcript 551_........558100
ENST00000374117ENSG00000236683 transcript 306_........313100
ENST00000415560ENSG00000236683 transcript 306_........313100
ENST00000572816GRCh37:4:16362507:16398946:-1 822_........829100
ENST00000515048ENSG00000249506 transcript 863_........870100
ENST00000515048ENSG00000249506 transcript 1074__.......108087
ENST00000496795ENSG00000228519 transcript 183_........176100
ENST00000598153ENSG00000269761 transcript 13_........6100
ENST00000404054ENSG00000218422 transcript 1350_........1343100
ENST00000404054ENSG00000218422 transcript 1666_........1673100
ENST00000400869ENSG00000255619 transcript 636_........629100
ENST00000455167ENSG00000256456 transcript 636_........629100
ENST00000457877ENSG00000256840 transcript 636_........629100
ENST00000436064ENSG00000255707 transcript 636_........629100
ENST00000437360ENSG00000256619 transcript 636_........629100
ENST00000422870ENSG00000256868 transcript 636_........629100
ENST00000417395ENSG00000256024 transcript 636_........629100
ENST00000422561ENSG00000256252 transcript 636_........629100
ENST00000227666ENSG00000255638 transcript 636_........629100
ENST00000543836ENSG00000256521 transcript 636_........629100
ENST00000537684ENSG00000256344 transcript 636_........629100
ENST00000378762ENSG00000256631 transcript 636_........629100
ENST00000535364ENSG00000256490 transcript 636_........629100
ENST00000441253GRCh37:17:26553589:26555091:1 742_........735100
ENST00000579401ENSG00000266433 transcript 1439_........1432100
ENST00000586223GRCh37:17:25745031:25758649:1 2655_........2648100
ENST00000490318ENSG00000227709 transcript 155_........148100
ENST00000452517ENSG00000227182 transcript 698_........691100
ENST00000441896ENSG00000189166 transcript 1205_........1212100
ENST00000441896ENSG00000189166 transcript 817__.......82387
ENST00000441896ENSG00000189166 transcript 1551_......._155787
ENST00000553667ENSG00000259100 transcript 15_........8100
ENST00000553667ENSG00000259100 transcript 747_......._75387
ENST00000496515ENSG00000241984 transcript 359_........352100
ENST00000440070ENSG00000226582 transcript 140_........133100
ENST00000340350ENSG00000188831 transcript 354_........347100
ENST00000553589ENSG00000188831 transcript 107_........100100
ENST00000557188GRCh37:14:36840370:36841588:1 354_........347100
ENST00000569815GRCh37:15:29090107:29093821:-1 807_........814100
ENST00000482081ENSG00000219932 transcript 15_........22100
ENST00000430589GRCh37:15:29033389:29034538:1 241_........248100