VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>tumv-miR-s80
gagaaguu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`gagaagtt`	8
ENST00000576395	ENSG00000262390 transcript	189	`_........`	182	100
ENST00000579792	ENSG00000264945 transcript	221	`_........`	214	100
ENST00000575050	ENSG00000263260 transcript	539	`_........`	532	100
ENST00000572345	ENSG00000262437 transcript	189	`_........`	182	100
ENST00000571203	ENSG00000262463 transcript	539	`_........`	532	100
ENST00000573914	ENSG00000262625 transcript	221	`_........`	214	100
ENST00000571502	ENSG00000263145 transcript	539	`_........`	532	100
ENST00000576070	ENSG00000262830 transcript	189	`_........`	182	100
ENST00000572194	ENSG00000261849 transcript	221	`_........`	214	100
ENST00000599088	ENSG00000268608 transcript	186	`_........`	179	100
ENST00000603850	ENSG00000271013 transcript	374	`_........`	381	100
ENST00000603850	ENSG00000271013 transcript	2273	`_........`	2266	100
ENST00000603850	ENSG00000271013 transcript	32	`__.......`	26	87
ENST00000603850	ENSG00000271013 transcript	954	`__.......`	948	87
ENST00000603850	ENSG00000271013 transcript	1990	`__.......`	1984	87
ENST00000609591	ENSG00000273479 transcript	98	`_........`	105	100
ENST00000605746	ENSG00000270536 transcript	302	`_........`	309	100
ENST00000597094	ENSG00000267947 transcript	634	`_........`	627	100
ENST00000608599	GRCh37:HG444	897	`_........`	904	100
ENST00000608599	GRCh37:HG444	561	`_......._`	567	87
ENST00000608599	GRCh37:HG444	915	`_......._`	921	87
ENST00000608196	GRCh37:HG444	751	`_........`	758	100
ENST00000608196	GRCh37:HG444	415	`_......._`	421	87
ENST00000608196	GRCh37:HG444	769	`_......._`	775	87
ENST00000610151	ENSG00000273140 transcript	905	`_........`	912	100
ENST00000610151	ENSG00000273140 transcript	923	`_......._`	929	87
ENST00000609989	ENSG00000272587 transcript	4081	`_........`	4088	100
ENST00000608054	ENSG00000273195 transcript	2102	`_........`	2095	100
ENST00000608054	ENSG00000273195 transcript	509	`_......._`	503	87
ENST00000608687	GRCh37:HG174	1469	`_........`	1462	100
ENST00000595540	ENSG00000268185 transcript	458	`_........`	451	100
ENST00000595540	ENSG00000268185 transcript	2365	`_........`	2358	100
ENST00000595674	ENSG00000268487 transcript	325	`_........`	332	100
ENST00000605628	ENSG00000270481 transcript	221	`_........`	214	100
ENST00000604676	ENSG00000270645 transcript	539	`_........`	532	100
ENST00000605019	ENSG00000270247 transcript	189	`_........`	182	100
ENST00000596316	ENSG00000268921 transcript	1368	`_........`	1375	100
ENST00000580131	ENSG00000264738 transcript	253	`_........`	260	100
ENST00000581270	ENSG00000263665 transcript	181	`_........`	188	100
ENST00000581270	ENSG00000263665 transcript	285	`__.......`	291	87
ENST00000581270	ENSG00000263665 transcript	356	`__.......`	350	87
ENST00000581270	ENSG00000263665 transcript	1058	`__.......`	1064	87
ENST00000581270	ENSG00000263665 transcript	1315	`__.......`	1321	87
ENST00000579653	ENSG00000265196 transcript	322	`_........`	329	100
ENST00000579653	ENSG00000265196 transcript	686	`_......._`	680	87
ENST00000579709	ENSG00000265196 transcript	1001	`_........`	1008	100
ENST00000579709	ENSG00000265196 transcript	1367	`_......._`	1361	87
ENST00000600401	ENSG00000267899 transcript	2932	`_........`	2939	100
ENST00000600401	ENSG00000267899 transcript	2944	`_........`	2951	100
ENST00000584595	ENSG00000266797 transcript	497	`_........`	504	100
ENST00000595150	ENSG00000269822 transcript	371	`_........`	364	100
ENST00000595150	ENSG00000269822 transcript	333	`__.......`	327	87
ENST00000599869	ENSG00000268294 transcript	800	`_........`	793	100
ENST00000599332	ENSG00000269669 transcript	121	`_........`	114	100
ENST00000575125	ENSG00000262461 transcript	459	`_........`	452	100
ENST00000575125	ENSG00000262461 transcript	486	`_......._`	480	87
ENST00000573748	ENSG00000262461 transcript	455	`_........`	448	100
ENST00000573748	ENSG00000262461 transcript	482	`_......._`	476	87
ENST00000576332	ENSG00000262461 transcript	455	`_........`	448	100
ENST00000576332	ENSG00000262461 transcript	482	`_......._`	476	87
ENST00000575025	ENSG00000262295 transcript	264	`_........`	271	100
ENST00000570792	ENSG00000262295 transcript	413	`_........`	420	100
ENST00000575155	ENSG00000262295 transcript	612	`_........`	619	100
ENST00000571977	ENSG00000262295 transcript	308	`_........`	315	100
ENST00000571413	ENSG00000262295 transcript	373	`_........`	380	100
ENST00000571413	ENSG00000262295 transcript	12	`_......._`	6	87
ENST00000578771	ENSG00000265397 transcript	1921	`_........`	1914	100
ENST00000578771	ENSG00000265397 transcript	144	`_......._`	138	87
ENST00000573343	ENSG00000262844 transcript	617	`_........`	610	100
ENST00000437591	ENSG00000230342 transcript	12	`_........`	19	100
ENST00000438698	ENSG00000180385 transcript	21	`_........`	28	100
ENST00000366264	GRCh37:3:10028577:10044449:1	391	`_........`	398	100
ENST00000383606	ENSG00000215160 transcript	604	`_........`	597	100
ENST00000404435	ENSG00000220248 transcript	35	`_........`	28	100
ENST00000430910	ENSG00000240122 transcript	206	`_........`	213	100
ENST00000421366	ENSG00000226444 transcript	436	`_........`	443	100
ENST00000422332	ENSG00000226444 transcript	791	`_........`	798	100
ENST00000382990	ENSG00000206168 transcript	13	`_........`	20	100
ENST00000382990	ENSG00000206168 transcript	209	`__.......`	203	87
ENST00000603489	ENSG00000271002 transcript	260	`_........`	253	100
ENST00000545636	ENSG00000233614 transcript	341	`_........`	334	100
ENST00000430178	ENSG00000233614 transcript	33	`_........`	26	100
ENST00000513886	GRCh37:16:61555:64090:1	339	`_........`	332	100
ENST00000574727	GRCh37:17:6757180:6805511:1	3320	`_........`	3313	100
ENST00000574727	GRCh37:17:6757180:6805511:1	3820	`__.......`	3826	87
ENST00000570955	ENSG00000272590 transcript	345	`_........`	338	100
ENST00000570955	ENSG00000272590 transcript	539	`_......._`	533	87
ENST00000575880	ENSG00000263219 transcript	419	`_........`	426	100
ENST00000575880	ENSG00000263219 transcript	863	`_......._`	869	87
ENST00000570463	ENSG00000272751 transcript	345	`_........`	338	100
ENST00000570463	ENSG00000272751 transcript	539	`_......._`	533	87
ENST00000576035	ENSG00000262953 transcript	860	`_........`	867	100
ENST00000418130	ENSG00000232400 transcript	964	`_........`	957	100
ENST00000418130	ENSG00000232400 transcript	334	`__.......`	340	87
ENST00000418130	ENSG00000232400 transcript	999	`_......._`	1005	87
ENST00000432006	ENSG00000224280 transcript	1986	`_........`	1979	100
ENST00000432006	ENSG00000224280 transcript	1243	`__.......`	1237	87
ENST00000422060	GRCh37:7:5161203:5184177:-1	983	`_........`	976	100
ENST00000422060	GRCh37:7:5161203:5184177:-1	702	`__.......`	708	87
ENST00000422060	GRCh37:7:5161203:5184177:-1	1179	`_......._`	1185	87
ENST00000530367	ENSG00000159904 transcript	454	`_........`	447	100
ENST00000530367	ENSG00000159904 transcript	650	`_......._`	656	87
ENST00000581685	ENSG00000266488 transcript	12	`_........`	19	100
ENST00000603334	ENSG00000270863 transcript	1285	`_........`	1278	100
ENST00000518655	ENSG00000223972 transcript	339	`_........`	332	100
ENST00000515242	ENSG00000223972 transcript	341	`_........`	334	100
ENST00000450305	ENSG00000223972 transcript	82	`_........`	75	100
ENST00000456328	GRCh37:1:11869:14409:1	344	`_........`	337	100
ENST00000542513	ENSG00000256682 transcript	345	`_........`	338	100