Predicted targets for your query miRNA sequence
>rrv-miR-rr1-5-3p
ggcguguu
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap
Acc numberGeneStartAlignmentEnd% Identity
Query1ggcgtgtt8
ENST00000601868ENSG00000268459 transcript 1298........1291100
ENST00000601868ENSG00000268459 transcript 885_.......89187
ENST00000582321ENSG00000265937 transcript 482........475100
ENST00000579101ENSG00000265937 transcript 648........641100
ENST00000601591ENSG00000268867 transcript 1027........1034100
ENST00000603863ENSG00000270851 transcript 373........366100
ENST00000572620ENSG00000262250 transcript 627........634100
ENST00000577130ENSG00000262627 transcript 605........612100
ENST00000427983ENSG00000229835 transcript 1204........1197100
ENST00000575066ENSG00000262181 transcript 379........372100
ENST00000453595ENSG00000223723 transcript 1027........1034100
ENST00000561628ENSG00000261753 transcript 337........330100
ENST00000606872GRCh37:19:62115:70944:-1 3404........3411100
ENST00000449243ENSG00000229436 transcript 67........74100
ENST00000471253ENSG00000244705 transcript 529........522100
ENST00000459980ENSG00000242142 transcript 727........734100
ENST00000430593GRCh37:15:37090797:37110660:-1 1679........1672100
ENST00000416477ENSG00000237297 transcript 337........330100
ENST00000459899ENSG00000240023 transcript 533........526100
ENST00000450566ENSG00000238072 transcript 25........18100
ENST00000566803ENSG00000260053 transcript 629........636100
ENST00000561950ENSG00000261524 transcript 611........618100
ENST00000564840ENSG00000261308 transcript 26........19100
ENST00000558695ENSG00000259689 transcript 628........635100
ENST00000456092ENSG00000214982 transcript 786........779100
ENST00000404618ENSG00000225784 transcript 684........677100
ENST00000568175ENSG00000260133 transcript 199........206100
ENST00000451083ENSG00000225533 transcript 80........73100
ENST00000545609GRCh37:12:45570210:45609824:-1 105........98100
ENST00000538741ENSG00000244171 transcript 273........266100
ENST00000538741ENSG00000244171 transcript 487......._49387
ENST00000538741ENSG00000244171 transcript 1840......._183487
ENST00000493219ENSG00000244171 transcript 231........224100
ENST00000493219ENSG00000244171 transcript 445......._45187
ENST00000560287GRCh37:3:142895127:142897305:1 273........266100
ENST00000560287GRCh37:3:142895127:142897305:1 487......._49387
ENST00000560287GRCh37:3:142895127:142897305:1 1840......._183487
ENST00000565429GRCh37:HG7 1804........1811100
ENST00000473259ENSG00000244653 transcript 587........580100
ENST00000496669ENSG00000241293 transcript 37........44100
ENST00000485881ENSG00000241478 transcript 200........193100
ENST00000550637ENSG00000257639 transcript 199........206100
ENST00000469174ENSG00000230673 transcript 295........302100
ENST00000419025ENSG00000223529 transcript 625........618100
ENST00000604527ENSG00000270852 transcript 274........267100
ENST00000568768GRCh37:2:95533231:95613086:-1 5706........5713100
ENST00000474858ENSG00000179342 transcript 21........28100
ENST00000480094ENSG00000243312 transcript 565........558100
ENST00000397477ENSG00000214076 transcript 2202........2209100
ENST00000512025ENSG00000249960 transcript 119........112100
ENST00000443260ENSG00000231093 transcript 1298........1291100
ENST00000443260ENSG00000231093 transcript 885_.......89187
ENST00000377712ENSG00000204872 transcript 87........80100
ENST00000446101ENSG00000180771 transcript 1874........1867100
ENST00000446101ENSG00000180771 transcript 430_.......43687
ENST00000498774ENSG00000240429 transcript 510........503100
ENST00000512757ENSG00000248355 transcript 153........146100
ENST00000325612ENSG00000180211 transcript 277........284100
ENST00000545938ENSG00000223612 transcript 648........641100
ENST00000433527ENSG00000223612 transcript 482........475100
ENST00000442006ENSG00000215895 transcript 117........124100
ENST00000427215ENSG00000227141 transcript 818........811100
ENST00000393525GRCh37:2:89065385:89106126:1 3605........3612100
ENST00000481349GRCh37:1:178004409:178007059:-1 345........338100
ENST00000517740ENSG00000237586 transcript 403........396100
ENST00000449328ENSG00000232508 transcript 180........173100
ENST00000604941ENSG00000271307 transcript 373........366100
ENST00000439132ENSG00000230787 transcript 726........719100
ENST00000458247ENSG00000229785 transcript 191........184100
ENST00000456370ENSG00000228410 transcript 105........98100
ENST00000328673ENSG00000181837 transcript 579........586100
ENST00000531492ENSG00000181837 transcript 628........635100
ENST00000451920ENSG00000213724 transcript 642........649100
ENST00000425573ENSG00000225171 transcript 90........83100
ENST00000425667ENSG00000224431 transcript 469........476100
ENST00000425667ENSG00000224431 transcript 2924......._293087
ENST00000404344ENSG00000218725 transcript 85........92100
ENST00000405810ENSG00000219451 transcript 277........284100
ENST00000503381ENSG00000250372 transcript 1525........1518100
ENST00000445535ENSG00000225217 transcript 61........68100
ENST00000454465ENSG00000204745 transcript 2852........2845100
ENST00000436212ENSG00000236484 transcript 100........93100
ENST00000429208ENSG00000224540 transcript 1028........1035100
ENST00000430851ENSG00000125631 transcript 954........961100
ENST00000435216ENSG00000234219 transcript 139........132100
ENST00000442572ENSG00000226289 transcript 139........132100
ENST00000334288GRCh37:7:141968101:141972054:-1 1804........1811100
ENST00000593565ENSG00000230929 transcript 112........119100
ENST00000490423ENSG00000230929 transcript 112........119100
ENST00000534243ENSG00000254920 transcript 381........374100
ENST00000530465ENSG00000254728 transcript 1679........1686100
ENST00000530465ENSG00000254728 transcript 3264........3257100
ENST00000510345ENSG00000251046 transcript 1646........1639100
ENST00000555268ENSG00000259064 transcript 145........138100
ENST00000513885ENSG00000249525 transcript 115........108100
ENST00000511060ENSG00000250496 transcript 384........377100
ENST00000518968ENSG00000253810 transcript 720........713100
ENST00000561384GRCh37:15:45119398:45176892:-1 1001........1008100
ENST00000558556ENSG00000259479 transcript 885........892100
ENST00000564140GRCh37:15:45119149:45122635:-1 301........308100
ENST00000562107GRCh37:15:45118569:45120929:-1 260........267100
ENST00000420129ENSG00000229708 transcript 67........74100
ENST00000502378ENSG00000233838 transcript 891........898100
ENST00000560593ENSG00000259493 transcript 847........854100
ENST00000455730ENSG00000232662 transcript 77........84100
ENST00000413933ENSG00000226818 transcript 499........492100
ENST00000576946GRCh37:HSCHR22 3899........3906100
ENST00000574943GRCh37:HSCHR22 3901........3908100
ENST00000598621GRCh37:HG1497 1276........1269100
ENST00000601852GRCh37:HG1497 220........227100
ENST00000601852GRCh37:HG1497 3631_.......363787
ENST00000595445GRCh37:HG1497 144........151100
ENST00000599466GRCh37:HG1497 765........772100
ENST00000599466GRCh37:HG1497 619_.......62587
ENST00000598506GRCh37:HG1497 410........417100
ENST00000594323GRCh37:HG1459 8116........8109100
ENST00000600198GRCh37:HG1459 9477........9470100
ENST00000600198GRCh37:HG1459 690_.......68487
ENST00000595230GRCh37:HG1459 9582........9575100
ENST00000595230GRCh37:HG1459 702_.......69687
ENST00000605424GRCh37:HG385 485........492100
ENST00000604063GRCh37:HG385 235........228100
ENST00000604063GRCh37:HG385 2633_.......263987
ENST00000604641GRCh37:HG385 235........228100
ENST00000604641GRCh37:HG385 2681_.......268787
ENST00000607762GRCh37:HG1595 172........165100
ENST00000571568GRCh37:HG418 2182........2175100
ENST00000575946GRCh37:HG418 2160........2153100
ENST00000610232GRCh37:HG1082 2743........2750100
ENST00000601543GRCh37:HG1436 3389........3396100
ENST00000599758GRCh37:HG1436 3248........3255100
ENST00000595943GRCh37:HG1436 53........46100
ENST00000603165GRCh37:HG29 963........956100
ENST00000603165GRCh37:HG29 139......._13387
ENST00000605184GRCh37:HG29 972........965100
ENST00000605184GRCh37:HG29 148......._14287
ENST00000603555GRCh37:HG29 1368........1361100
ENST00000603555GRCh37:HG29 304......._29887
ENST00000603071GRCh37:HG29 999........992100
ENST00000605084GRCh37:HG29 1057........1050100
ENST00000605853GRCh37:HG29 1087........1080100
ENST00000604531GRCh37:HG29 1101........1094100
ENST00000603377GRCh37:HG1592 1254........1261100
ENST00000603377GRCh37:HG1592 2134......._212887
ENST00000603377GRCh37:HG1592 2568_.......256287
ENST00000604377GRCh37:HG1592 85........78100
ENST00000603567GRCh37:HG1592 88........81100
ENST00000603567GRCh37:HG1592 1834......._182887
ENST00000603567GRCh37:HG1592 2268_.......226287
ENST00000605420GRCh37:HG1592 231........224100
ENST00000605420GRCh37:HG1592 2079......._207387
ENST00000605420GRCh37:HG1592 2513_.......250787
ENST00000605420GRCh37:HG1592 3942_.......394887
ENST00000605420GRCh37:HG1592 4828......._483487
ENST00000605802GRCh37:HG1592 231........224100
ENST00000605802GRCh37:HG1592 2079......._207387
ENST00000605802GRCh37:HG1592 2546_.......254087
ENST00000605817GRCh37:HG1592 560........553100
ENST00000605817GRCh37:HG1592 2396......._239087
ENST00000605817GRCh37:HG1592 2830_.......282487
ENST00000595964GRCh37:HG1443 2070........2063100
ENST00000597470GRCh37:HG1443 1974........1967100
ENST00000595850GRCh37:HG1443 1974........1967100
ENST00000600991GRCh37:HG375 27........34100
ENST00000609007GRCh37:HG375 27........34100
ENST00000601491GRCh37:HG1440 854........861100
ENST00000598061GRCh37:HG1440 885........892100
ENST00000593702GRCh37:HG1433 76........83100
ENST00000574019GRCh37:HG1257 200........193100
ENST00000571633GRCh37:HG1257 238........231100
ENST00000576304GRCh37:HG1257 201........194100
ENST00000575057GRCh37:HG1257 207........200100
ENST00000574873GRCh37:HG1257 2138........2145100
ENST00000601538GRCh37:HG865 945........938100
ENST00000601538GRCh37:HG865 247_.......24187
ENST00000601538GRCh37:HG865 1309_.......130387
ENST00000608988GRCh37:HG865 1202........1195100
ENST00000608988GRCh37:HG865 504_.......49887
ENST00000595521GRCh37:HG1501 1131........1138100
ENST00000595521GRCh37:HG1501 4585......._457987
ENST00000595289GRCh37:HG971 202........195100
ENST00000595289GRCh37:HG971 900......._90687
ENST00000577167GRCh37:HG1257 51........58100
ENST00000573847GRCh37:HG1257 102........109100
ENST00000570494GRCh37:HG1257 41........48100
ENST00000573285GRCh37:HG1257 51........58100
ENST00000575600GRCh37:HG1257 39........46100
ENST00000593546GRCh37:HG27 417........410100
ENST00000436244GRCh37:1:202909963:202927700:-1 1064........1071100
ENST00000495562GRCh37:1:202909954:202913924:-1 1039........1046100
ENST00000340990GRCh37:1:202909951:202927517:-1 1104........1111100
ENST00000492604GRCh37:2:61415609:61416931:-1 322........329100
ENST00000436269GRCh37:2:61414685:61431465:-1 698........705100
ENST00000398571GRCh37:2:61414598:61697904:-1 10141........10148100
ENST00000398571GRCh37:2:61414598:61697904:-1 9105......._909987
ENST00000411912GRCh37:2:61414598:61468749:-1 3093........3100100
ENST00000411912GRCh37:2:61414598:61468749:-1 2306......._230087
ENST00000394457GRCh37:2:61404664:61418338:1 4050........4043100
ENST00000332129GRCh37:1:200938520:200992828:-1 7890........7897100
ENST00000536618GRCh37:3:197556499:197612701:1 1772........1779100
ENST00000433298GRCh37:3:197574872:197610869:1 924........931100
ENST00000425562GRCh37:3:197518150:197611173:1 2613........2620100
ENST00000438796GRCh37:3:197518106:197615307:1 2903........2910100
ENST00000438796GRCh37:3:197518106:197615307:1 7381......._738787
ENST00000367511GRCh37:1:184760164:184943682:-1 4916........4923100
ENST00000407595GRCh37:2:56411258:56613308:1 1489........1482100
ENST00000407595GRCh37:2:56411258:56613308:1 1530_.......152487
ENST00000367567GRCh37:1:181452716:181770711:1 3748........3755100
ENST00000358338GRCh37:1:181452716:181770711:1 3691........3698100
ENST00000357570GRCh37:1:181452716:181770711:1 3748........3755100
ENST00000367573GRCh37:1:181452881:181768095:1 3583........3590100
ENST00000360108GRCh37:1:181452874:181768048:1 3533........3540100
ENST00000526775GRCh37:1:181452716:181777219:1 3691........3698100
ENST00000367570GRCh37:1:181452716:181770716:1 3748........3755100
ENST00000353281GRCh37:17:42449550:42466873:-1 279........286100
ENST00000353281GRCh37:17:42449550:42466873:-1 1102......._110887
ENST00000592462GRCh37:17:42451292:42460865:-1 3048........3055100
ENST00000262407GRCh37:17:42449551:42466873:-1 279........286100
ENST00000262407GRCh37:17:42449551:42466873:-1 1102......._110887
ENST00000263726GRCh37:1:180199421:180249380:1 6294........6287100
ENST00000263726GRCh37:1:180199421:180249380:1 6738_.......674487
ENST00000592560GRCh37:17:42436714:42441168:-1 412........419100
ENST00000588067GRCh37:17:42433674:42441202:-1 446........453100
ENST00000589407GRCh37:17:42433335:42441180:-1 424........431100
ENST00000293443GRCh37:17:42430583:42441243:-1 487........494100
ENST00000408940GRCh37:1:179068463:179112179:-1 10324........10331100
ENST00000502732GRCh37:1:179068462:179198736:-1 10636........10643100
ENST00000495275GRCh37:1:173790947:173793611:-1 1385........1392100
ENST00000495275GRCh37:1:173790947:173793611:-1 437_.......44387
ENST00000602389GRCh37:10:16632619:16859453:-1 33........40100
ENST00000602389GRCh37:10:16632619:16859453:-1 716......._72287
ENST00000377911GRCh37:10:16635312:16859462:-1 42........49100
ENST00000377911GRCh37:10:16635312:16859462:-1 725......._73187
ENST00000345264GRCh37:10:16632610:16859527:-1 107........114100
ENST00000345264GRCh37:10:16632610:16859527:-1 902......._90887
ENST00000309758GRCh37:1:161494036:161496681:1 474........481100
ENST00000367995GRCh37:1:161165769:161168843:-1 877........884100
ENST00000367996GRCh37:1:161154098:161168846:-1 880........887100
ENST00000367996GRCh37:1:161154098:161168846:-1 2815......._280987
ENST00000493997GRCh37:2:55080988:55110015:1 3768........3775100
ENST00000493997GRCh37:2:55080988:55110015:1 1127......._113387
ENST00000552029GRCh37:12:107371327:107380904:-1 186........193100
ENST00000542039GRCh37:17:42088958:42092417:-1 615........622100
ENST00000542039GRCh37:17:42088958:42092417:-1 614_.......60887
ENST00000206380GRCh37:17:42088559:42092345:-1 711........718100
ENST00000206380GRCh37:17:42088559:42092345:-1 710_.......70487
ENST00000589334GRCh37:17:42088556:42100519:-1 1002........1009100
ENST00000589334GRCh37:17:42088556:42100519:-1 1001_.......99587
ENST00000420909GRCh37:7:75211408:75241161:-1 238........231100
ENST00000434438GRCh37:7:75163409:75368259:-1 201........194100
ENST00000336926GRCh37:7:75162621:75368265:-1 207........200100
ENST00000436219GRCh37:HSCHR6 1880........1873100
ENST00000436219GRCh37:HSCHR6 1652......._165887
ENST00000455000GRCh37:HSCHR6 2040........2033100
ENST00000455000GRCh37:HSCHR6 1812......._181887
ENST00000438908GRCh37:HSCHR6 1812........1805100
ENST00000438908GRCh37:HSCHR6 1584......._159087
ENST00000493978GRCh37:HSCHR6 1677........1670100
ENST00000493978GRCh37:HSCHR6 1449......._145587
ENST00000556347GRCh37:14:61995846:62124682:1 135........142100
ENST00000553846GRCh37:14:61994655:62014564:1 313........320100
ENST00000557599GRCh37:14:61992370:62016520:1 344........351100
ENST00000555382GRCh37:14:61992370:62014604:1 407........414100
ENST00000555628GRCh37:14:61958911:62014582:1 307........314100
ENST00000536400GRCh37:14:61943885:62016664:1 422........429100
ENST00000555082GRCh37:14:61789382:62017694:1 1356........1363100
ENST00000332981GRCh37:14:61788435:62017694:1 2006........2013100
ENST00000555185GRCh37:14:61654277:61997302:1 453........460100
ENST00000481522GRCh37:1:160275021:160275714:-1 239........232100
ENST00000241704GRCh37:1:160259063:160313190:-1 1760........1753100
ENST00000172853GRCh37:2:152341855:152590946:-1 3567........3560100
ENST00000172853GRCh37:2:152341855:152590946:-1 14103......._1409787
ENST00000172853GRCh37:2:152341855:152590946:-1 14332......._1432687
ENST00000172853GRCh37:2:152341855:152590946:-1 17052......._1704687
ENST00000172853GRCh37:2:152341855:152590946:-1 18558......._1855287
ENST00000427231GRCh37:2:152341853:152591001:-1 3622........3615100
ENST00000427231GRCh37:2:152341853:152591001:-1 19261......._1925587
ENST00000427231GRCh37:2:152341853:152591001:-1 19490......._1948487
ENST00000427231GRCh37:2:152341853:152591001:-1 22210......._2220487
ENST00000427231GRCh37:2:152341853:152591001:-1 23716......._2371087
ENST00000397345GRCh37:2:152341853:152591001:-1 3622........3615100
ENST00000397345GRCh37:2:152341853:152591001:-1 19261......._1925587
ENST00000397345GRCh37:2:152341853:152591001:-1 19490......._1948487
ENST00000397345GRCh37:2:152341853:152591001:-1 22210......._2220487
ENST00000397345GRCh37:2:152341853:152591001:-1 23716......._2371087
ENST00000497809GRCh37:2:152347721:152349810:-1 16........9100
ENST00000603639GRCh37:2:152342274:152589670:-1 3419........3412100
ENST00000603639GRCh37:2:152342274:152589670:-1 19058......._1905287
ENST00000603639GRCh37:2:152342274:152589670:-1 19287......._1928187
ENST00000603639GRCh37:2:152342274:152589670:-1 22007......._2200187
ENST00000603639GRCh37:2:152342274:152589670:-1 23513......._2350787
ENST00000604864GRCh37:2:152342274:152589670:-1 3419........3412100
ENST00000604864GRCh37:2:152342274:152589670:-1 19058......._1905287
ENST00000604864GRCh37:2:152342274:152589670:-1 19287......._1928187
ENST00000604864GRCh37:2:152342274:152589670:-1 22007......._2200187
ENST00000604864GRCh37:2:152342274:152589670:-1 23513......._2350787
ENST00000409198GRCh37:2:152341850:152591001:-1 3622........3615100
ENST00000409198GRCh37:2:152341850:152591001:-1 14158......._1415287
ENST00000409198GRCh37:2:152341850:152591001:-1 14387......._1438187
ENST00000409198GRCh37:2:152341850:152591001:-1 17107......._1710187
ENST00000409198GRCh37:2:152341850:152591001:-1 18613......._1860787
ENST00000485230GRCh37:3:112930412:112970852:1 244........237100
ENST00000485230GRCh37:3:112930412:112970852:1 348_.......35487
ENST00000498710GRCh37:3:112930381:112987273:1 275........268100
ENST00000498710GRCh37:3:112930381:112987273:1 379_.......38587
ENST00000495514GRCh37:3:112930329:113006298:1 327........320100
ENST00000495514GRCh37:3:112930329:113006298:1 431_.......43787
ENST00000529574GRCh37:14:60712475:60759200:1 492........499100
ENST00000531937GRCh37:14:60723480:60749865:1 220........227100
ENST00000525399GRCh37:14:60717149:60749984:1 386........393100
ENST00000528241GRCh37:14:60716378:60749807:1 273........280100
ENST00000325658GRCh37:14:60716159:60755273:1 454........461100
ENST00000395076GRCh37:14:60715986:60765805:1 525........532100
ENST00000531143GRCh37:14:60712475:60759200:1 492........499100
ENST00000325642GRCh37:14:60712470:60759449:1 410........417100
ENST00000378217GRCh37:10:15085962:15115851:1 151........144100
ENST00000378225GRCh37:10:15085926:15104083:1 187........180100
ENST00000378228GRCh37:10:15085895:15115851:1 218........211100
ENST00000429028GRCh37:10:15080621:15107723:1 189........182100
ENST00000413672GRCh37:10:15074252:15098949:1 225........218100
ENST00000428897GRCh37:10:15074226:15107610:1 251........244100
ENST00000609196GRCh37:1:147101453:147131116:-1 1333........1326100
ENST00000238961GRCh37:10:102672326:102724893:1 6800........6807100
ENST00000389173GRCh37:17:7623039:7737058:1 10307........10300100
ENST00000389173GRCh37:17:7623039:7737058:1 5298_.......529287
ENST00000389173GRCh37:17:7623039:7737058:1 10740_.......1073487
ENST00000575105GRCh37:17:7707638:7734996:1 1140........1133100
ENST00000575105GRCh37:17:7707638:7734996:1 1573_.......156787
ENST00000572933GRCh37:17:7620672:7737062:1 11753........11746100
ENST00000572933GRCh37:17:7620672:7737062:1 6744_.......673887
ENST00000572933GRCh37:17:7620672:7737062:1 12186_.......1218087
ENST00000404260GRCh37:5:65892176:66465423:1 1360........1353100
ENST00000447738GRCh37:5:66300580:66400403:1 703........696100
ENST00000436277GRCh37:5:66300483:66398378:1 540........533100
ENST00000261569GRCh37:5:66300448:66462879:1 835........828100
ENST00000405643GRCh37:5:66254698:66462879:1 884........877100
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