Predicted targets for your query miRNA sequence
>hcmv-miR-us33-3p
ucacgguc
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap
Acc numberGeneStartAlignmentEnd% Identity
Query1tcacggtc8
ENST00000604835ENSG00000270715 transcript 118........111100
ENST00000521393ENSG00000253692 transcript 118........111100
ENST00000575050ENSG00000263260 transcript 8........15100
ENST00000571203ENSG00000262463 transcript 8........15100
ENST00000571502ENSG00000263145 transcript 8........15100
ENST00000609986ENSG00000272616 transcript 454........447100
ENST00000604676ENSG00000270645 transcript 8........15100
ENST00000572534ENSG00000261948 transcript 1870........1877100
ENST00000572225ENSG00000261948 transcript 2269........2276100
ENST00000509301ENSG00000250645 transcript 366........359100
ENST00000322899ENSG00000180042 transcript 227........234100
ENST00000572493ENSG00000180042 transcript 227........234100
ENST00000361014ENSG00000197320 transcript 179........186100
ENST00000361014ENSG00000197320 transcript 333_.......32787
ENST00000443027ENSG00000197320 transcript 179........186100
ENST00000443027ENSG00000197320 transcript 333_.......32787
ENST00000435385ENSG00000233469 transcript 299........306100
ENST00000439212ENSG00000233905 transcript 368........375100
ENST00000414981ENSG00000235148 transcript 410........403100
ENST00000497974ENSG00000232203 transcript 643........636100
ENST00000584783ENSG00000266605 transcript 453........460100
ENST00000589764ENSG00000267533 transcript 425........432100
ENST00000584346ENSG00000264714 transcript 451........444100
ENST00000449607ENSG00000224589 transcript 600........593100
ENST00000507437ENSG00000250896 transcript 859........866100
ENST00000495140GRCh37:19:10152517:10184811:1 381........374100
ENST00000497718ENSG00000167798 transcript 1467........1460100
ENST00000497718ENSG00000167798 transcript 477......._47187
ENST00000380333GRCh37:X:15693838:15721472:1 775........768100
ENST00000380334GRCh37:X:15693669:15721847:1 738........731100
ENST00000597372ENSG00000268758 transcript 579........572100
ENST00000600751GRCh37:19:6952511:6990857:-1 1068........1061100
ENST00000479478ENSG00000215367 transcript 551........544100
ENST00000502630GRCh37:4:1108985:1116952:-1 328........321100
ENST00000441557ENSG00000234813 transcript 412........405100
ENST00000423417ENSG00000234328 transcript 87........80100
ENST00000515427ENSG00000248352 transcript 87........80100
ENST00000438938ENSG00000223657 transcript 17........24100
ENST00000455800ENSG00000225371 transcript 1772........1779100
ENST00000479705ENSG00000243316 transcript 1041........1034100
ENST00000434745ENSG00000237799 transcript 1784........1791100
ENST00000407916ENSG00000218586 transcript 843........836100
ENST00000552112ENSG00000258021 transcript 261........254100
ENST00000315132ENSG00000214754 transcript 754........761100
ENST00000445539ENSG00000237827 transcript 348........341100
ENST00000443330ENSG00000235955 transcript 1763........1770100
ENST00000442076ENSG00000232706 transcript 415........408100
ENST00000427885ENSG00000235695 transcript 251........258100
ENST00000554326ENSG00000258415 transcript 337........344100
ENST00000545332ENSG00000232561 transcript 2269........2276100
ENST00000441487ENSG00000232561 transcript 1843........1850100
ENST00000556676ENSG00000258420 transcript 337........344100
ENST00000425524GRCh37:7:44068826:44078601:-1 412........405100
ENST00000446874GRCh37:7:44066550:44078607:-1 418........411100
ENST00000420754ENSG00000239556 transcript 654........661100
ENST00000396270ENSG00000233560 transcript 197........204100
ENST00000547237ENSG00000257976 transcript 287........294100
ENST00000444350ENSG00000230073 transcript 699........692100
ENST00000434549ENSG00000235746 transcript 85........78100
ENST00000434549ENSG00000235746 transcript 321_.......31587
ENST00000544802ENSG00000233369 transcript 2269........2276100
ENST00000453092ENSG00000233369 transcript 1870........1877100
ENST00000438709ENSG00000196912 transcript 534........527100
ENST00000258459ENSG00000196912 transcript 534........527100
ENST00000377003ENSG00000196912 transcript 534........527100
ENST00000419390GRCh37:2:98167775:98206278:-1 384........377100
ENST00000443455GRCh37:2:98164028:98206327:-1 433........426100
ENST00000359901ENSG00000196912 transcript 290........283100
ENST00000434179ENSG00000224917 transcript 598........591100
ENST00000565105GRCh37:HG7 505........498100
ENST00000565444ENSG00000260446 transcript 1445........1438100
ENST00000565444ENSG00000260446 transcript 448......._44287
ENST00000320746ENSG00000176082 transcript 1433........1426100
ENST00000434308ENSG00000230025 transcript 530........523100
ENST00000569310ENSG00000261528 transcript 603........596100
ENST00000550858ENSG00000257674 transcript 1447........1440100
ENST00000579400ENSG00000265460 transcript 582........575100
ENST00000594263GRCh37:19:40129325:40133041:1 1549........1542100
ENST00000465687ENSG00000242159 transcript 281........288100
ENST00000533003ENSG00000230716 transcript 199........206100
ENST00000397978ENSG00000249715 transcript 287........280100
ENST00000436930ENSG00000249715 transcript 4099........4092100
ENST00000414152ENSG00000249715 transcript 4057........4050100
ENST00000457909GRCh37:2:97335955:97370622:1 3479........3472100
ENST00000424961ENSG00000249715 transcript 4099........4092100
ENST00000569196ENSG00000259978 transcript 57........50100
ENST00000566937ENSG00000260024 transcript 53........46100
ENST00000425692ENSG00000226145 transcript 1331........1324100
ENST00000584481GRCh37:17:16721306:16722677:-1 470........463100
ENST00000417510GRCh37:17:16721297:16725893:-1 1619........1612100
ENST00000437359ENSG00000226918 transcript 672........665100
ENST00000415311ENSG00000242473 transcript 8........15100
ENST00000413425ENSG00000228767 transcript 197........204100
ENST00000458108ENSG00000234737 transcript 325........318100
ENST00000458108ENSG00000234737 transcript 703_.......69787
ENST00000412333ENSG00000215004 transcript 886........893100
ENST00000569528ENSG00000261239 transcript 1982........1975100
ENST00000566201GRCh37:16:46505451:46603009:-1 1982........1975100
ENST00000571006GRCh37:16:46503253:46551863:-1 478........471100
ENST00000596612ENSG00000268473 transcript 169........162100
ENST00000458417ENSG00000174677 transcript 323........330100
ENST00000458417ENSG00000174677 transcript 51_.......4587
ENST00000438127ENSG00000234268 transcript 131........138100
ENST00000480739ENSG00000242990 transcript 434........427100
ENST00000504105ENSG00000250162 transcript 181........174100
ENST00000415020ENSG00000227368 transcript 145........152100
ENST00000423622ENSG00000224140 transcript 87........80100
ENST00000552355ENSG00000258058 transcript 331........338100
ENST00000463439ENSG00000244234 transcript 1136........1129100
ENST00000604721ENSG00000271635 transcript 458........451100
ENST00000504812ENSG00000250148 transcript 164........171100
ENST00000460917ENSG00000239516 transcript 982........975100
ENST00000434096ENSG00000231043 transcript 1103........1096100
ENST00000500444ENSG00000246596 transcript 130........123100
ENST00000506861GRCh37:6:109630510:109657620:1 224........217100
ENST00000508210GRCh37:6:109630473:109635398:1 261........254100
ENST00000368966ENSG00000203799 transcript 734........727100
ENST00000601992GRCh37:19:20588513:20607679:-1 154........147100
ENST00000311237ENSG00000231205 transcript 194........187100
ENST00000502675GRCh37:19:20575923:20607762:-1 216........209100
ENST00000597334GRCh37:19:20515776:20607775:-1 250........243100
ENST00000600513GRCh37:19:20509467:20607727:-1 202........195100
ENST00000541160GRCh37:19:20451177:20607765:-1 240........233100
ENST00000525712ENSG00000254743 transcript 130........137100
ENST00000604015GRCh37:1:48561764:48593620:-1 144........137100
ENST00000521217ENSG00000232871 transcript 1212........1219100
ENST00000430145GRCh37:19:49141356:49184424:1 1463........1470100
ENST00000555494ENSG00000258856 transcript 515........522100
ENST00000600311GRCh37:14:58096559:58097880:1 600........607100
ENST00000424019ENSG00000233827 transcript 972........979100
ENST00000507684ENSG00000248290 transcript 87........80100
ENST00000490411ENSG00000244235 transcript 378........385100
ENST00000490411ENSG00000244235 transcript 217_.......21187
ENST00000483964ENSG00000241961 transcript 397........404100
ENST00000504931ENSG00000224124 transcript 8703........8696100
ENST00000552357ENSG00000258221 transcript 331........338100
ENST00000464513ENSG00000184139 transcript 76........69100
ENST00000314927ENSG00000177725 transcript 605........598100
ENST00000476232GRCh37:1:177975271:178007085:-1 1561........1554100
ENST00000478994ENSG00000187483 transcript 710........703100
ENST00000469935GRCh37:14:95107062:95113331:1 969........962100
ENST00000558927ENSG00000259470 transcript 197........204100
ENST00000558927ENSG00000259470 transcript 764_.......77087
ENST00000444697ENSG00000229462 transcript 1652........1659100
ENST00000402023ENSG00000218459 transcript 128........135100
ENST00000465482ENSG00000239620 transcript 90........83100
ENST00000407896ENSG00000217684 transcript 323........330100
ENST00000434856ENSG00000198857 transcript 1118........1111100
ENST00000444067ENSG00000235613 transcript 1031........1024100
ENST00000536946ENSG00000257109 transcript 587........594100
ENST00000559128ENSG00000257109 transcript 589........596100
ENST00000441868ENSG00000213117 transcript 873........880100
ENST00000603413ENSG00000271097 transcript 457........450100
ENST00000610003ENSG00000272559 transcript 445........438100
ENST00000518921ENSG00000237810 transcript 695........702100
ENST00000518921ENSG00000237810 transcript 1045......._103987
ENST00000599047ENSG00000269119 transcript 454........447100
ENST00000470598ENSG00000225405 transcript 338........331100
ENST00000426217ENSG00000233709 transcript 25........32100
ENST00000430851ENSG00000125631 transcript 159........166100
ENST00000425761ENSG00000230204 transcript 131........124100
ENST00000583091ENSG00000266876 transcript 46........39100
ENST00000515767ENSG00000250363 transcript 295........288100
ENST00000358601ENSG00000198367 transcript 349........342100
ENST00000597719ENSG00000198367 transcript 339........332100
ENST00000598431ENSG00000269787 transcript 352........345100
ENST00000598431ENSG00000269787 transcript 396_.......40287
ENST00000595284ENSG00000269787 transcript 317........310100
ENST00000595284ENSG00000269787 transcript 361_.......36787
ENST00000429864ENSG00000226802 transcript 22........15100
ENST00000344424ENSG00000188399 transcript 224........217100
ENST00000304105ENSG00000172148 transcript 352........345100
ENST00000304105ENSG00000172148 transcript 396_.......40287
ENST00000506277ENSG00000249850 transcript 703........696100
ENST00000452528GRCh37:1:157895764:157918861:1 60........67100
ENST00000454878ENSG00000236957 transcript 553........560100
ENST00000534741ENSG00000220948 transcript 1255........1248100
ENST00000477615GRCh37:7:141940593:141943603:-1 505........498100
ENST00000460233ENSG00000240268 transcript 1445........1438100
ENST00000460233ENSG00000240268 transcript 448......._44287
ENST00000437853ENSG00000237118 transcript 37........44100
ENST00000435241ENSG00000227376 transcript 134........127100
ENST00000414579ENSG00000238116 transcript 1671........1678100
ENST00000414579ENSG00000238116 transcript 420......._41487
ENST00000504053ENSG00000248878 transcript 125........132100
ENST00000503032ENSG00000250374 transcript 590........583100
ENST00000549148ENSG00000257412 transcript 331........338100
ENST00000411867ENSG00000235012 transcript 1102........1109100
ENST00000588207ENSG00000267497 transcript 1243........1236100
ENST00000315762GRCh37:9:67792167:67794649:1 589........596100
ENST00000315762GRCh37:9:67792167:67794649:1 88_.......8287
ENST00000412073ENSG00000226054 transcript 993........1000100
ENST00000452572ENSG00000226054 transcript 875........882100
ENST00000560698GRCh37:15:83142510:83182928:-1 859........852100
ENST00000558178GRCh37:15:83142145:83182822:-1 792........785100
ENST00000559952GRCh37:15:83141718:83182928:-1 765........758100
ENST00000546150ENSG00000212951 transcript 907........914100
ENST00000418795ENSG00000204805 transcript 1357........1350100
ENST00000558075GRCh37:15:82944810:82974312:1 698........691100
ENST00000559567GRCh37:15:82944773:82974290:1 698........691100
ENST00000417687ENSG00000237207 transcript 603........610100
ENST00000547716GRCh37:15:82765926:82798350:-1 859........852100
ENST00000539808GRCh37:15:82765561:82798244:-1 792........785100
ENST00000558577GRCh37:15:82765134:82798350:-1 765........758100
ENST00000454256ENSG00000236247 transcript 600........607100
ENST00000592443ENSG00000267573 transcript 239........246100
ENST00000428776ENSG00000228808 transcript 384........377100
ENST00000502780ENSG00000249048 transcript 111........104100
ENST00000609290GRCh37:HSCHR17 222........229100
ENST00000571164GRCh37:HSCHR19LRC 382........389100
ENST00000575965GRCh37:HSCHR19LRC 106........113100
ENST00000577107GRCh37:HSCHR19LRC 14........21100
ENST00000575629GRCh37:HSCHR19LRC 14........21100
ENST00000572011GRCh37:HSCHR19LRC 14........21100
ENST00000574358GRCh37:HSCHR19LRC 14........21100
ENST00000573527GRCh37:HSCHR19LRC 455........462100
ENST00000572228GRCh37:HSCHR19LRC 184........191100
ENST00000575328GRCh37:HSCHR19LRC 239........246100
ENST00000572972GRCh37:HSCHR19LRC 239........246100
ENST00000573979GRCh37:HSCHR19LRC 286........293100
ENST00000572646GRCh37:HSCHR19LRC 371........378100
ENST00000575292GRCh37:HSCHR19LRC 14........21100
ENST00000573061GRCh37:HSCHR19LRC 14........21100
ENST00000573974GRCh37:HSCHR19LRC 14........21100
ENST00000577069GRCh37:HSCHR19LRC 52........59100
ENST00000575950GRCh37:HSCHR19LRC 101........108100
ENST00000575706GRCh37:HSCHR19LRC 103........110100
ENST00000574047GRCh37:HSCHR19LRC 147........154100
ENST00000576297GRCh37:HSCHR19LRC 603........610100
ENST00000570900GRCh37:HSCHR19LRC 14........21100
ENST00000576927GRCh37:HSCHR19LRC 14........21100
ENST00000572909GRCh37:HSCHR19LRC 14........21100
ENST00000576744GRCh37:HSCHR19LRC 455........462100
ENST00000572526GRCh37:HSCHR19LRC 184........191100
ENST00000575581GRCh37:HSCHR19LRC 239........246100
ENST00000575929GRCh37:HSCHR19LRC 239........246100
ENST00000576389GRCh37:HSCHR19LRC 286........293100
ENST00000573436GRCh37:HSCHR19LRC 371........378100
ENST00000571765GRCh37:HSCHR19LRC 14........21100
ENST00000573387GRCh37:HSCHR19LRC 14........21100
ENST00000574258GRCh37:HSCHR19LRC 14........21100
ENST00000577050GRCh37:HSCHR19LRC 52........59100
ENST00000570811GRCh37:HSCHR19LRC 101........108100
ENST00000573976GRCh37:HSCHR19LRC 103........110100
ENST00000571783GRCh37:HSCHR19LRC 147........154100
ENST00000570993GRCh37:HSCHR19LRC 603........610100
ENST00000571761GRCh37:HSCHR19LRC 382........389100
ENST00000570542GRCh37:HSCHR19LRC 106........113100
ENST00000574010GRCh37:HSCHR19LRC 14........21100
ENST00000574138GRCh37:HSCHR19LRC 382........389100
ENST00000575459GRCh37:HSCHR19LRC 106........113100
ENST00000576482GRCh37:HSCHR19LRC 14........21100
ENST00000593679GRCh37:HG1497 371........364100
ENST00000599173GRCh37:HG1497 858........851100
ENST00000598796GRCh37:HG1497 506........499100
ENST00000597562GRCh37:HG1497 599........592100
ENST00000596978GRCh37:HG1497 628........621100
ENST00000599487GRCh37:HG1497 2544........2551100
ENST00000599487GRCh37:HG1497 1601......._159587
ENST00000599487GRCh37:HG1497 3980_.......397487
ENST00000599487GRCh37:HG1497 5408......._540287
ENST00000599487GRCh37:HG1497 5413_.......540787
ENST00000600520GRCh37:HG1497 2738........2745100
ENST00000600520GRCh37:HG1497 1795......._178987
ENST00000600520GRCh37:HG1497 4174_.......416887
ENST00000600520GRCh37:HG1497 5722......._571687
ENST00000600520GRCh37:HG1497 5727_.......572187
ENST00000597475GRCh37:HG1497 2750........2757100
ENST00000597475GRCh37:HG1497 1807......._180187
ENST00000597475GRCh37:HG1497 4186_.......418087
ENST00000597475GRCh37:HG1497 5710......._570487
ENST00000597475GRCh37:HG1497 5715_.......570987
ENST00000596447GRCh37:HG1497 2539........2546100
ENST00000596447GRCh37:HG1497 1596......._159087
ENST00000596447GRCh37:HG1497 3975_.......396987
ENST00000596447GRCh37:HG1497 5499......._549387
ENST00000596447GRCh37:HG1497 5504_.......549887
ENST00000602134GRCh37:HG1497 2457........2464100
ENST00000602134GRCh37:HG1497 1516......._151087
ENST00000602134GRCh37:HG1497 3893_.......388787
ENST00000602134GRCh37:HG1497 5441......._543587
ENST00000602134GRCh37:HG1497 5446_.......544087
ENST00000601388GRCh37:HG1497 710........717100
ENST00000601388GRCh37:HG1497 60_.......5487
ENST00000601388GRCh37:HG1497 1539_.......153387
ENST00000602058GRCh37:HG1497 710........717100
ENST00000602058GRCh37:HG1497 60_.......5487
ENST00000602058GRCh37:HG1497 1581_.......157587
ENST00000572057GRCh37:HG1497 710........717100
ENST00000572057GRCh37:HG1497 60_.......5487
ENST00000572057GRCh37:HG1497 1581_.......157587
ENST00000571862GRCh37:HG1497 988........995100
ENST00000571862GRCh37:HG1497 338_.......33287
ENST00000571862GRCh37:HG1497 1817_.......181187
ENST00000575463GRCh37:HG1497 910........917100
ENST00000575463GRCh37:HG1497 260_.......25487
ENST00000575463GRCh37:HG1497 1739_.......173387
ENST00000571969GRCh37:HG1497 910........917100
ENST00000571969GRCh37:HG1497 260_.......25487
ENST00000571969GRCh37:HG1497 1781_.......177587
ENST00000600844GRCh37:HG1497 1195........1188100
ENST00000599765GRCh37:HG1497 745........738100
ENST00000595032GRCh37:HG1497 325........318100
ENST00000595628GRCh37:HG1497 1827........1820100
ENST00000594334GRCh37:HG1497 1630........1623100
ENST00000599647GRCh37:HG1497 546........539100
ENST00000599277GRCh37:HG1497 194........187100
ENST00000597897GRCh37:HG1497 1062........1055100
ENST00000595261GRCh37:HG1497 900........893100
ENST00000595172GRCh37:HG1497 1018........1011100
ENST00000596566GRCh37:HG1497 1018........1011100
ENST00000597970GRCh37:HG1497 1195........1188100
ENST00000593327GRCh37:HG1459 2664........2671100
ENST00000597866GRCh37:HG344 575........582100
ENST00000599853GRCh37:HG344 1025........1032100
ENST00000601642GRCh37:HG344 1104........1111100
ENST00000595244GRCh37:HG417 222........229100
ENST00000609173GRCh37:HG1082 468........461100
ENST00000609173GRCh37:HG1082 1504_.......149887
ENST00000608800GRCh37:HG1082 526........519100
ENST00000608800GRCh37:HG1082 1565_.......155987
ENST00000609535GRCh37:HG1082 1256........1263100
ENST00000610079GRCh37:HG1082 1207........1214100
ENST00000610166GRCh37:HG1082 1130........1123100
ENST00000610166GRCh37:HG1082 1095_.......110187
ENST00000610166GRCh37:HG1082 1956......._196287
ENST00000608698GRCh37:HG1082 1130........1123100
ENST00000608698GRCh37:HG1082 1095_.......110187
ENST00000608698GRCh37:HG1082 1421......._142787
ENST00000609631GRCh37:HG1082 1130........1123100
ENST00000609631GRCh37:HG1082 1095_.......110187
ENST00000609631GRCh37:HG1082 1421......._142787
ENST00000609918GRCh37:HG1082 1269........1262100
ENST00000609918GRCh37:HG1082 1234_.......124087
ENST00000609918GRCh37:HG1082 1560......._156687
ENST00000610163GRCh37:HG1082 1133........1126100
ENST00000610163GRCh37:HG1082 1424......._143087
ENST00000610163GRCh37:HG1082 1959......._196587
ENST00000608508GRCh37:HG1082 1133........1126100
ENST00000608508GRCh37:HG1082 1424......._143087
ENST00000608256GRCh37:HG1082 1133........1126100
ENST00000608256GRCh37:HG1082 1424......._143087
ENST00000608256GRCh37:HG1082 1959......._196587
ENST00000596262GRCh37:HG1436 187........180100
ENST00000597676GRCh37:HG1436 219........212100
ENST00000601021GRCh37:HG1436 219........212100
ENST00000600191GRCh37:HG1436 3568........3575100
ENST00000600191GRCh37:HG1436 1199_.......120587
ENST00000604891GRCh37:HG1079 8........15100
ENST00000603789GRCh37:HG1079 41........48100
ENST00000604020GRCh37:HG1079 14........21100
ENST00000604919GRCh37:HG1079 14........21100
ENST00000604802GRCh37:HG1079 14........21100
ENST00000604147GRCh37:HG1079 455........462100
ENST00000604562GRCh37:HG1079 184........191100
ENST00000605199GRCh37:HG1079 239........246100
ENST00000605248GRCh37:HG1079 239........246100
ENST00000605792GRCh37:HG1079 286........293100
ENST00000605213GRCh37:HG1079 371........378100
ENST00000605114GRCh37:HG1079 14........21100
ENST00000605813GRCh37:HG1079 14........21100
ENST00000603140GRCh37:HG1079 14........21100
ENST00000605348GRCh37:HG1079 52........59100
ENST00000605212GRCh37:HG1079 101........108100
ENST00000605148GRCh37:HG1079 103........110100
ENST00000604108GRCh37:HG1079 147........154100
ENST00000603711GRCh37:HG1079 603........610100
ENST00000579989GRCh37:HG1287 33........26100
ENST00000595622GRCh37:HG1441 308........301100
ENST00000595622GRCh37:HG1441 184......._17887
ENST00000595622GRCh37:HG1441 224_.......23087
ENST00000595622GRCh37:HG1441 438_.......43287
ENST00000601017GRCh37:HG1441 1894........1887100
ENST00000599396GRCh37:HG1441 2658........2651100
ENST00000573035GRCh37:HG1257 3183........3190100
ENST00000601538GRCh37:HG865 3344........3337100
ENST00000601538GRCh37:HG865 2228......._223487
ENST00000601391GRCh37:HG865 2169........2162100
ENST00000601391GRCh37:HG865 1050......._105687
ENST00000605412GRCh37:HG865 2148........2141100
ENST00000605412GRCh37:HG865 1050......._105687
ENST00000606715GRCh37:HG865 2139........2132100
ENST00000606715GRCh37:HG865 1050......._105687
ENST00000583692GRCh37:HG1211 694........701100
ENST00000328118GRCh37:17:43299292:43324681:1 3385........3378100
ENST00000586092GRCh37:17:43322693:43323842:1 282........275100
ENST00000589911GRCh37:17:43322691:43323920:1 520........513100
ENST00000586643GRCh37:17:43320485:43323971:1 1175........1168100
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