VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>wssv-miR66
ucuguugc

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`tctgttgc`	8
ENST00000570361	ENSG00000261991 transcript	141	`_........`	134	100
ENST00000609136	ENSG00000273339 transcript	1700	`_........`	1707	100
ENST00000609136	ENSG00000273339 transcript	435	`__.......`	441	87
ENST00000608347	ENSG00000272697 transcript	274	`_........`	281	100
ENST00000603850	ENSG00000271013 transcript	2247	`_........`	2240	100
ENST00000603850	ENSG00000271013 transcript	384	`__.......`	390	87
ENST00000603850	ENSG00000271013 transcript	1019	`_......._`	1013	87
ENST00000603850	ENSG00000271013 transcript	4714	`_......._`	4708	87
ENST00000565386	ENSG00000261228 transcript	591	`_........`	598	100
ENST00000608618	ENSG00000272890 transcript	101	`_........`	94	100
ENST00000608618	ENSG00000272890 transcript	135	`_......._`	141	87
ENST00000608922	ENSG00000272753 transcript	545	`_........`	538	100
ENST00000608922	ENSG00000272753 transcript	594	`_......._`	600	87
ENST00000609989	ENSG00000272587 transcript	1063	`_........`	1070	100
ENST00000609989	ENSG00000272587 transcript	1183	`_......._`	1189	87
ENST00000608821	GRCh37:HG174	738	`_........`	731	100
ENST00000608821	GRCh37:HG174	756	`__.......`	750	87
ENST00000608292	GRCh37:HG174	658	`_........`	651	100
ENST00000608292	GRCh37:HG174	243	`_......._`	237	87
ENST00000608292	GRCh37:HG174	676	`__.......`	670	87
ENST00000608054	ENSG00000273195 transcript	1303	`_........`	1296	100
ENST00000608054	ENSG00000273195 transcript	1321	`__.......`	1315	87
ENST00000608687	GRCh37:HG174	670	`_........`	663	100
ENST00000608687	GRCh37:HG174	688	`__.......`	682	87
ENST00000597031	ENSG00000267887 transcript	79	`_........`	86	100
ENST00000595664	ENSG00000268917 transcript	76	`_........`	83	100
ENST00000601269	ENSG00000269683 transcript	77	`_........`	84	100
ENST00000594495	ENSG00000267999 transcript	76	`_........`	83	100
ENST00000599623	ENSG00000269287 transcript	813	`_........`	806	100
ENST00000596316	ENSG00000268921 transcript	298	`_........`	291	100
ENST00000577283	ENSG00000264011 transcript	1173	`_........`	1180	100
ENST00000581270	ENSG00000263665 transcript	1246	`_........`	1239	100
ENST00000596408	ENSG00000268893 transcript	449	`_........`	442	100
ENST00000582794	ENSG00000266797 transcript	314	`_........`	307	100
ENST00000584595	ENSG00000266797 transcript	1196	`_........`	1189	100
ENST00000584595	ENSG00000266797 transcript	1573	`__.......`	1567	87
ENST00000594757	ENSG00000268045 transcript	132	`_........`	139	100
ENST00000597247	ENSG00000269065 transcript	167	`_........`	160	100
ENST00000599585	ENSG00000268198 transcript	180	`_........`	187	100
ENST00000599585	ENSG00000268198 transcript	199	`_......._`	193	87
ENST00000593488	ENSG00000268114 transcript	76	`_........`	83	100
ENST00000599929	ENSG00000268448 transcript	76	`_........`	83	100
ENST00000598524	ENSG00000268356 transcript	454	`_........`	447	100
ENST00000576405	GRCh37:HG1257	261	`_........`	268	100
ENST00000576405	GRCh37:HG1257	2360	`_........`	2353	100
ENST00000578342	ENSG00000265578 transcript	91	`_........`	98	100
ENST00000578342	ENSG00000265578 transcript	604	`_......._`	598	87
ENST00000578342	ENSG00000265578 transcript	1418	`__.......`	1412	87
ENST00000578342	ENSG00000265578 transcript	2505	`_......._`	2499	87
ENST00000571039	ENSG00000262984 transcript	842	`_........`	849	100
ENST00000571039	ENSG00000262984 transcript	1055	`__.......`	1049	87
ENST00000601495	GRCh37:HG1211	146	`_........`	139	100
ENST00000577453	ENSG00000264651 transcript	147	`_........`	154	100
ENST00000577453	ENSG00000264651 transcript	660	`_......._`	654	87
ENST00000577453	ENSG00000264651 transcript	1474	`__.......`	1468	87
ENST00000577453	ENSG00000264651 transcript	2354	`_......._`	2348	87
ENST00000610045	ENSG00000272624 transcript	1414	`_........`	1407	100
ENST00000576293	ENSG00000262935 transcript	30	`_........`	37	100
ENST00000564735	ENSG00000260297 transcript	24	`_........`	31	100
ENST00000576879	ENSG00000262398 transcript	12	`_........`	19	100
ENST00000432401	GRCh37:3:10055932:10068041:-1	1248	`_........`	1255	100
ENST00000432401	GRCh37:3:10055932:10068041:-1	183	`__.......`	189	87
ENST00000426903	ENSG00000224082 transcript	1374	`_........`	1367	100
ENST00000421957	ENSG00000227367 transcript	944	`_........`	951	100
ENST00000573378	ENSG00000263283 transcript	1057	`_........`	1050	100
ENST00000576035	ENSG00000262953 transcript	277	`_........`	270	100
ENST00000576035	ENSG00000262953 transcript	1050	`_......._`	1044	87
ENST00000574104	ENSG00000262708 transcript	114	`_........`	121	100
ENST00000420684	ENSG00000236748 transcript	476	`_........`	483	100
ENST00000420684	ENSG00000236748 transcript	99	`_......._`	105	87
ENST00000604734	ENSG00000270314 transcript	99	`_........`	106	100
ENST00000467154	ENSG00000244167 transcript	191	`_........`	184	100
ENST00000461922	ENSG00000241539 transcript	358	`_........`	365	100
ENST00000486256	GRCh37:7:6749759:6793493:1	2530	`_........`	2523	100
ENST00000486256	GRCh37:7:6749759:6793493:1	158	`_......._`	152	87
ENST00000486256	GRCh37:7:6749759:6793493:1	821	`_......._`	827	87
ENST00000486256	GRCh37:7:6749759:6793493:1	981	`_......._`	975	87
ENST00000451054	GRCh37:1:999898:1001821:1	444	`_........`	437	100
ENST00000456409	GRCh37:1:998459:1001836:1	614	`_........`	607	100
ENST00000427998	GRCh37:1:995114:1001836:1	841	`_........`	834	100
ENST00000454044	ENSG00000237636 transcript	1695	`_........`	1702	100
ENST00000454044	ENSG00000237636 transcript	842	`_......._`	836	87
ENST00000454044	ENSG00000237636 transcript	1282	`_......._`	1276	87
ENST00000452841	ENSG00000235500 transcript	2347	`_........`	2340	100
ENST00000452841	ENSG00000235500 transcript	2902	`_......._`	2908	87
ENST00000443167	ENSG00000235876 transcript	1251	`_........`	1244	100
ENST00000477936	ENSG00000243830 transcript	298	`_........`	305	100
ENST00000532280	GRCh37:9:33673502:33677497:-1	2488	`_........`	2481	100
ENST00000426153	ENSG00000231991 transcript	1280	`_........`	1273	100
ENST00000455940	ENSG00000223421 transcript	303	`_........`	296	100
ENST00000515723	GRCh37:9:2992062:3014177:-1	87	`_........`	94	100
ENST00000426329	ENSG00000227835 transcript	209	`_........`	216	100
ENST00000426329	ENSG00000227835 transcript	34	`_......._`	28	87
ENST00000431297	ENSG00000229231 transcript	1249	`_........`	1242	100
ENST00000474011	GRCh37:21:11059928:11098980:-1	177	`_........`	170	100
ENST00000474011	GRCh37:21:11059928:11098980:-1	1183	`_......._`	1177	87
ENST00000470054	GRCh37:21:11020842:11098925:-1	122	`_........`	115	100
ENST00000571982	GRCh37:HSCHR5	777	`_........`	784	100
ENST00000573162	GRCh37:HSCHR5	777	`_........`	784	100
ENST00000538921	ENSG00000256748 transcript	1094	`_........`	1087	100
ENST00000574067	ENSG00000262197 transcript	1493	`_........`	1486	100
ENST00000574067	ENSG00000262197 transcript	685	`__.......`	679	87
ENST00000574067	ENSG00000262197 transcript	2305	`__.......`	2299	87
ENST00000574067	ENSG00000262197 transcript	3115	`__.......`	3109	87
ENST00000574067	ENSG00000262197 transcript	3934	`__.......`	3928	87
ENST00000577045	GRCh37:HSCHR5	158	`_........`	151	100
ENST00000581547	ENSG00000265296 transcript	1252	`_........`	1245	100
ENST00000576853	GRCh37:HSCHR5	1666	`_........`	1673	100
ENST00000588055	ENSG00000267162 transcript	53	`_........`	60	100
ENST00000588055	ENSG00000267162 transcript	455	`__.......`	461	87
ENST00000400673	ENSG00000215608 transcript	667	`_........`	660	100
ENST00000584511	ENSG00000264127 transcript	443	`_........`	436	100
ENST00000603371	ENSG00000271519 transcript	619	`_........`	612	100
ENST00000434731	ENSG00000233880 transcript	661	`_........`	654	100
ENST00000434731	ENSG00000233880 transcript	805	`_......._`	799	87
ENST00000515413	ENSG00000251113 transcript	798	`_........`	791	100
ENST00000515413	ENSG00000251113 transcript	41	`__.......`	47	87
ENST00000445763	ENSG00000225384 transcript	392	`_........`	385	100
ENST00000445763	ENSG00000225384 transcript	283	`__.......`	277	87
ENST00000399993	ENSG00000215310 transcript	1129	`_........`	1136	100
ENST00000503354	ENSG00000249995 transcript	792	`_........`	799	100
ENST00000503354	ENSG00000249995 transcript	1045	`_........`	1052	100
ENST00000445047	ENSG00000226774 transcript	166	`_........`	173	100
ENST00000284414	GRCh37:10:27536230:27539491:-1	365	`_........`	358	100
ENST00000284414	GRCh37:10:27536230:27539491:-1	773	`_......._`	767	87
ENST00000284414	GRCh37:10:27536230:27539491:-1	1130	`_......._`	1124	87
ENST00000448648	ENSG00000230445 transcript	1596	`_........`	1589	100
ENST00000448648	ENSG00000230445 transcript	2004	`_......._`	1998	87
ENST00000448648	ENSG00000230445 transcript	2361	`_......._`	2355	87
ENST00000590455	ENSG00000267544 transcript	199	`_........`	206	100
ENST00000418200	ENSG00000225066 transcript	943	`_........`	950	100
ENST00000418200	ENSG00000225066 transcript	145	`_......._`	151	87
ENST00000505858	ENSG00000248364 transcript	404	`_........`	411	100
ENST00000480755	ENSG00000239830 transcript	639	`_........`	632	100
ENST00000480755	ENSG00000239830 transcript	687	`_........`	680	100
ENST00000480755	ENSG00000239830 transcript	582	`_......._`	576	87
ENST00000567299	ENSG00000260112 transcript	306	`_........`	313	100
ENST00000416702	ENSG00000228753 transcript	134	`_........`	127	100
ENST00000416702	ENSG00000228753 transcript	915	`_......._`	909	87
ENST00000507854	GRCh37:4:419604:467840:-1	738	`_........`	731	100
ENST00000507854	GRCh37:4:419604:467840:-1	756	`__.......`	750	87
ENST00000514396	GRCh37:4:419604:467840:-1	658	`_........`	651	100
ENST00000514396	GRCh37:4:419604:467840:-1	243	`_......._`	237	87
ENST00000514396	GRCh37:4:419604:467840:-1	676	`__.......`	670	87
ENST00000504019	ENSG00000251595 transcript	1303	`_........`	1296	100
ENST00000504019	ENSG00000251595 transcript	1321	`__.......`	1315	87
ENST00000451020	GRCh37:4:419224:467918:-1	670	`_........`	663	100
ENST00000451020	GRCh37:4:419224:467918:-1	688	`__.......`	682	87
ENST00000456003	ENSG00000235763 transcript	157	`_........`	150	100
ENST00000437306	ENSG00000237536 transcript	79	`_........`	72	100
ENST00000437306	ENSG00000237536 transcript	984	`_......._`	978	87
ENST00000422268	ENSG00000224052 transcript	79	`_........`	72	100
ENST00000422268	ENSG00000224052 transcript	984	`_......._`	978	87
ENST00000446715	ENSG00000227435 transcript	293	`_........`	286	100
ENST00000411707	GRCh37:HSCHR6	308	`_........`	301	100
ENST00000445775	ENSG00000236093 transcript	293	`_........`	286	100
ENST00000438271	GRCh37:HSCHR6	308	`_........`	301	100
ENST00000450068	ENSG00000235838 transcript	1476	`_........`	1469	100
ENST00000549747	ENSG00000257248 transcript	28	`_........`	35	100
ENST00000354937	ENSG00000185485 transcript	1905	`_........`	1898	100
ENST00000354937	ENSG00000185485 transcript	363	`__.......`	369	87
ENST00000440850	ENSG00000185485 transcript	1848	`_........`	1841	100
ENST00000440850	ENSG00000185485 transcript	305	`__.......`	311	87
ENST00000354559	GRCh37:3:195689975:195694766:-1	232	`_........`	225	100
ENST00000427841	GRCh37:3:195686792:195717150:-1	2138	`_........`	2131	100
ENST00000427841	GRCh37:3:195686792:195717150:-1	326	`__.......`	332	87
ENST00000427149	GRCh37:3:195686619:195694391:-1	56	`_........`	49	100
ENST00000497494	GRCh37:HSCHR6	2733	`_........`	2740	100
ENST00000552084	ENSG00000257394 transcript	28	`_........`	35	100
ENST00000421305	ENSG00000227979 transcript	42	`_........`	49	100
ENST00000435899	GRCh37:HSCHR6	3845	`_........`	3852	100
ENST00000435899	GRCh37:HSCHR6	2207	`__.......`	2201	87
ENST00000416813	ENSG00000234992 transcript	868	`_........`	875	100
ENST00000421811	ENSG00000227843 transcript	124	`_........`	117	100
ENST00000455183	ENSG00000215837 transcript	1849	`_........`	1842	100
ENST00000455183	ENSG00000215837 transcript	306	`__.......`	312	87
ENST00000476982	GRCh37:HSCHR6	2733	`_........`	2740	100
ENST00000584928	ENSG00000266306 transcript	582	`_........`	575	100
ENST00000582808	ENSG00000265060 transcript	54	`_........`	61	100
ENST00000583761	GRCh37:17:26574470:26575315:1	54	`_........`	61	100
ENST00000495689	ENSG00000243838 transcript	273	`_........`	266	100
ENST00000547585	ENSG00000258326 transcript	28	`_........`	35	100
ENST00000482187	GRCh37:HSCHR6	2729	`_........`	2736	100
ENST00000465493	ENSG00000242983 transcript	907	`_........`	914	100
ENST00000555388	ENSG00000258750 transcript	685	`_........`	692	100
ENST00000455917	GRCh37:HSCHR6	3791	`_........`	3798	100
ENST00000455917	GRCh37:HSCHR6	2206	`__.......`	2200	87
ENST00000281339	ENSG00000151631 transcript	79	`_........`	86	100
ENST00000432950	ENSG00000151631 transcript	79	`_........`	86	100
ENST00000452965	ENSG00000237725 transcript	674	`_........`	681	100
ENST00000424172	ENSG00000225274 transcript	868	`_........`	875	100
ENST00000581469	GRCh37:17:25744716:25757216:1	95	`_........`	88	100
ENST00000425159	GRCh37:17:45527934:45569858:-1	889	`_........`	882	100
ENST00000549191	ENSG00000257752 transcript	382	`_........`	389	100
ENST00000440720	ENSG00000228197 transcript	124	`_........`	117	100
ENST00000573797	ENSG00000262027 transcript	522	`_........`	515	100
ENST00000578745	ENSG00000264970 transcript	101	`_........`	94	100
ENST00000578745	ENSG00000264970 transcript	135	`_......._`	141	87
ENST00000580697	ENSG00000264431 transcript	545	`_........`	538	100
ENST00000580697	ENSG00000264431 transcript	594	`_......._`	600	87
ENST00000436937	ENSG00000227073 transcript	46	`_........`	53	100
ENST00000436937	ENSG00000227073 transcript	447	`__.......`	453	87
ENST00000464884	ENSG00000242537 transcript	59	`_........`	52	100
ENST00000480924	ENSG00000242850 transcript	302	`_........`	295	100
ENST00000416278	ENSG00000226701 transcript	298	`_........`	305	100
ENST00000437011	ENSG00000228195 transcript	740	`_........`	733	100
ENST00000549998	ENSG00000258206 transcript	138	`_........`	145	100
ENST00000414329	ENSG00000226428 transcript	306	`_........`	313	100
ENST00000604759	ENSG00000270503 transcript	507	`_........`	500	100
ENST00000604759	ENSG00000270503 transcript	563	`__.......`	557	87
ENST00000414433	GRCh37:HSCHR6	3728	`_........`	3735	100
ENST00000414433	GRCh37:HSCHR6	2186	`__.......`	2180	87
ENST00000442420	ENSG00000235278 transcript	586	`_........`	593	100
ENST00000580655	GRCh37:17:43717728:43719669:1	1106	`_........`	1099	100
ENST00000580655	GRCh37:17:43717728:43719669:1	701	`_......._`	695	87
ENST00000578000	GRCh37:17:43716341:43719666:1	1625	`_........`	1618	100
ENST00000578000	GRCh37:17:43716341:43719666:1	1220	`_......._`	1214	87
ENST00000570209	ENSG00000259845 transcript	2393	`_........`	2386	100
ENST00000455758	ENSG00000229467 transcript	674	`_........`	681	100
ENST00000458553	ENSG00000237698 transcript	868	`_........`	875	100
ENST00000551366	ENSG00000258375 transcript	343	`_........`	350	100
ENST00000445549	ENSG00000229045 transcript	124	`_........`	117	100
ENST00000560524	ENSG00000259299 transcript	586	`_........`	593	100
ENST00000560524	ENSG00000259299 transcript	1438	`_........`	1431	100
ENST00000560524	ENSG00000259299 transcript	27	`_......._`	33	87
ENST00000560524	ENSG00000259299 transcript	170	`_......._`	176	87
ENST00000560524	ENSG00000259299 transcript	399	`_......._`	393	87
ENST00000560524	ENSG00000259299 transcript	1339	`_......._`	1345	87
ENST00000560524	ENSG00000259299 transcript	1451	`__.......`	1445	87
ENST00000441215	ENSG00000226521 transcript	714	`_........`	721	100
ENST00000564604	GRCh37:15:29077477:29096703:1	473	`_........`	480	100
ENST00000452760	ENSG00000235546 transcript	976	`_........`	983	100
ENST00000549457	ENSG00000257956 transcript	264	`_........`	257	100
ENST00000469405	ENSG00000239919 transcript	163	`_........`	156	100
ENST00000550364	ENSG00000234642 transcript	293	`_........`	286	100
ENST00000437792	ENSG00000234642 transcript	293	`_........`	286	100
ENST00000454566	GRCh37:HSCHR6	308	`_........`	301	100
ENST00000407916	ENSG00000218586 transcript	815	`_........`	808	100
ENST00000407916	ENSG00000218586 transcript	4283	`_......._`	4289	87
ENST00000548854	ENSG00000257690 transcript	18	`_........`	25	100
ENST00000551853	ENSG00000257249 transcript	28	`_........`	35	100
ENST00000434037	GRCh37:7:75719749:75738097:-1	261	`_........`	268	100
ENST00000434037	GRCh37:7:75719749:75738097:-1	2360	`_........`	2353	100
ENST00000447679	GRCh37:HSCHR6	3728	`_........`	3735	100
ENST00000447679	GRCh37:HSCHR6	2186	`__.......`	2180	87
ENST00000428598	ENSG00000226896 transcript	674	`_........`	681	100
ENST00000445598	ENSG00000227576 transcript	868	`_........`	875	100
ENST00000366143	ENSG00000203315 transcript	28	`_........`	35	100
ENST00000436471	ENSG00000229586 transcript	1122	`_........`	1129	100
ENST00000436471	ENSG00000229586 transcript	470	`_......._`	476	87
ENST00000436471	ENSG00000229586 transcript	2503	`__.......`	2509	87
ENST00000333235	ENSG00000172294 transcript	2779	`_........`	2786	100
ENST00000459691	GRCh37:7:46820971:46823041:1	410	`_........`	417	100
ENST00000459691	GRCh37:7:46820971:46823041:1	1281	`_......._`	1275	87
ENST00000479267	ENSG00000242588 transcript	420	`_........`	413	100
ENST00000605862	GRCh37:7:128171752:128269512:1	460	`_........`	453	100
ENST00000526079	GRCh37:15:23435096:23448420:1	2975	`_........`	2982	100
ENST00000526079	GRCh37:15:23435096:23448420:1	276	`__.......`	270	87
ENST00000526079	GRCh37:15:23435096:23448420:1	417	`_......._`	411	87
ENST00000332869	ENSG00000183055 transcript	657	`_........`	650	100
ENST00000589195	ENSG00000267691 transcript	1338	`_........`	1331	100
ENST00000380761	ENSG00000205579 transcript	58	`_........`	51	100
ENST00000595442	ENSG00000205579 transcript	58	`_........`	51	100
ENST00000456373	ENSG00000227972 transcript	1138	`_........`	1145	100
ENST00000466044	ENSG00000240477 transcript	256	`_........`	249	100
ENST00000605422	ENSG00000271507 transcript	146	`_........`	139	100