VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>iltv-miR-i7
uuuuaaua

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`ttttaata`	8
ENST00000570532	ENSG00000262153 transcript	248	`_........`	241	100
ENST00000575653	ENSG00000263173 transcript	248	`_........`	241	100
ENST00000573831	ENSG00000262386 transcript	248	`_........`	241	100
ENST00000572743	ENSG00000262436 transcript	248	`_........`	241	100
ENST00000574675	ENSG00000262382 transcript	248	`_........`	241	100
ENST00000575807	ENSG00000262416 transcript	248	`_........`	241	100
ENST00000572409	ENSG00000262363 transcript	248	`_........`	241	100
ENST00000574145	ENSG00000262706 transcript	248	`_........`	241	100
ENST00000600886	ENSG00000267860 transcript	298	`_........`	291	100
ENST00000610173	ENSG00000273161 transcript	489	`_........`	482	100
ENST00000609989	ENSG00000272587 transcript	544	`_........`	537	100
ENST00000609989	ENSG00000272587 transcript	4019	`_........`	4026	100
ENST00000609989	ENSG00000272587 transcript	323	`_......._`	329	87
ENST00000609989	ENSG00000272587 transcript	2423	`__.......`	2429	87
ENST00000609989	ENSG00000272587 transcript	3398	`_......._`	3404	87
ENST00000609989	ENSG00000272587 transcript	3447	`_......._`	3453	87
ENST00000608734	ENSG00000273475 transcript	243	`_........`	236	100
ENST00000608734	ENSG00000273475 transcript	843	`_........`	836	100
ENST00000582460	ENSG00000264938 transcript	938	`_........`	931	100
ENST00000608054	ENSG00000273195 transcript	384	`_........`	377	100
ENST00000608054	ENSG00000273195 transcript	1247	`_......._`	1241	87
ENST00000608054	ENSG00000273195 transcript	1654	`_......._`	1648	87
ENST00000604013	ENSG00000271279 transcript	248	`_........`	241	100
ENST00000594007	ENSG00000269108 transcript	195	`_........`	188	100
ENST00000595076	ENSG00000267856 transcript	308	`_........`	301	100
ENST00000598257	ENSG00000269017 transcript	424	`_........`	417	100
ENST00000598257	ENSG00000269017 transcript	480	`_......._`	486	87
ENST00000599294	ENSG00000268345 transcript	131	`_........`	124	100
ENST00000598524	ENSG00000268356 transcript	675	`_........`	668	100
ENST00000598524	ENSG00000268356 transcript	106	`__.......`	112	87
ENST00000597090	ENSG00000269731 transcript	362	`_........`	355	100
ENST00000576405	GRCh37:HG1257	1742	`_........`	1749	100
ENST00000578342	ENSG00000265578 transcript	1132	`_........`	1125	100
ENST00000578342	ENSG00000265578 transcript	1282	`_........`	1275	100
ENST00000578342	ENSG00000265578 transcript	1596	`__.......`	1590	87
ENST00000572534	ENSG00000261948 transcript	675	`_........`	668	100
ENST00000572534	ENSG00000261948 transcript	791	`_......._`	797	87
ENST00000572534	ENSG00000261948 transcript	1476	`_......._`	1470	87
ENST00000572225	ENSG00000261948 transcript	1074	`_........`	1067	100
ENST00000572225	ENSG00000261948 transcript	1190	`_......._`	1196	87
ENST00000572225	ENSG00000261948 transcript	1875	`_......._`	1869	87
ENST00000577453	ENSG00000264651 transcript	1188	`_........`	1181	100
ENST00000577453	ENSG00000264651 transcript	1338	`_........`	1331	100
ENST00000577453	ENSG00000264651 transcript	1652	`__.......`	1646	87
ENST00000577453	ENSG00000264651 transcript	2703	`_......._`	2697	87
ENST00000577453	ENSG00000264651 transcript	3105	`__.......`	3099	87
ENST00000433573	ENSG00000233026 transcript	204	`_........`	211	100
ENST00000326237	GRCh37:3:10028595:10046928:1	975	`_........`	968	100
ENST00000326237	GRCh37:3:10028595:10046928:1	1851	`_......._`	1845	87
ENST00000422608	ENSG00000237835 transcript	83	`_........`	76	100
ENST00000423928	ENSG00000229027 transcript	557	`_........`	564	100
ENST00000423928	ENSG00000229027 transcript	592	`_......._`	586	87
ENST00000425038	GRCh37:22:17308364:17310225:1	634	`_........`	641	100
ENST00000425038	GRCh37:22:17308364:17310225:1	669	`_......._`	663	87
ENST00000425038	GRCh37:22:17308364:17310225:1	1334	`_......._`	1328	87
ENST00000448473	ENSG00000236235 transcript	362	`_........`	355	100
ENST00000440946	GRCh37:22:16162066:16172700:1	1146	`_........`	1139	100
ENST00000545636	ENSG00000233614 transcript	1632	`_........`	1625	100
ENST00000513886	GRCh37:16:61555:64090:1	1634	`_........`	1627	100
ENST00000575880	ENSG00000263219 transcript	985	`_........`	992	100
ENST00000573378	ENSG00000263283 transcript	1396	`_........`	1389	100
ENST00000358446	ENSG00000196737 transcript	1261	`_........`	1268	100
ENST00000358446	ENSG00000196737 transcript	648	`_......._`	654	87
ENST00000358446	ENSG00000196737 transcript	738	`_......._`	744	87
ENST00000358446	ENSG00000196737 transcript	1252	`__.......`	1258	87
ENST00000443749	ENSG00000235828 transcript	259	`_........`	252	100
ENST00000476382	ENSG00000235828 transcript	259	`_........`	252	100
ENST00000420252	ENSG00000236048 transcript	315	`_........`	308	100
ENST00000420252	ENSG00000236048 transcript	346	`__.......`	340	87
ENST00000564716	ENSG00000260079 transcript	465	`_........`	472	100
ENST00000570291	ENSG00000259853 transcript	20	`_........`	13	100
ENST00000582128	ENSG00000265973 transcript	780	`_........`	773	100
ENST00000453364	ENSG00000229305 transcript	553	`_........`	546	100
ENST00000451054	GRCh37:1:999898:1001821:1	456	`_........`	449	100
ENST00000456409	GRCh37:1:998459:1001836:1	626	`_........`	619	100
ENST00000427998	GRCh37:1:995114:1001836:1	853	`_........`	846	100
ENST00000423562	ENSG00000227232 transcript	1641	`_........`	1648	100
ENST00000541675	ENSG00000227232 transcript	1388	`_........`	1395	100
ENST00000438504	ENSG00000227232 transcript	1755	`_........`	1762	100
ENST00000518655	ENSG00000223972 transcript	1465	`_........`	1458	100
ENST00000515242	ENSG00000223972 transcript	1632	`_........`	1625	100
ENST00000456328	GRCh37:1:11869:14409:1	1639	`_........`	1632	100
ENST00000419430	ENSG00000237672 transcript	596	`_........`	589	100
ENST00000419430	ENSG00000237672 transcript	385	`_......._`	379	87
ENST00000532280	GRCh37:9:33673502:33677497:-1	3792	`_........`	3785	100
ENST00000532280	GRCh37:9:33673502:33677497:-1	2130	`_......._`	2136	87
ENST00000532280	GRCh37:9:33673502:33677497:-1	3635	`_......._`	3629	87
ENST00000532280	GRCh37:9:33673502:33677497:-1	3907	`_......._`	3913	87
ENST00000426425	ENSG00000229080 transcript	331	`_........`	324	100
ENST00000426425	ENSG00000229080 transcript	114	`__.......`	108	87
ENST00000426425	ENSG00000229080 transcript	659	`_......._`	665	87
ENST00000388966	ENSG00000255581 transcript	353	`_........`	346	100
ENST00000400348	ENSG00000215441 transcript	1034	`_........`	1027	100
ENST00000400348	ENSG00000215441 transcript	1876	`__.......`	1882	87
ENST00000607111	GRCh37:12:8048073:8052736:1	650	`_........`	657	100
ENST00000607111	GRCh37:12:8048073:8052736:1	941	`_........`	948	100
ENST00000525030	ENSG00000176654 transcript	846	`_........`	853	100
ENST00000428966	ENSG00000228810 transcript	1829	`_........`	1822	100
ENST00000400571	ENSG00000243064 transcript	1651	`_........`	1644	100
ENST00000400571	ENSG00000243064 transcript	1826	`__.......`	1832	87
ENST00000467409	GRCh37:21:15646212:15673707:1	1939	`_........`	1932	100
ENST00000467409	GRCh37:21:15646212:15673707:1	2114	`__.......`	2120	87
ENST00000481582	GRCh37:21:15646201:15672006:1	1924	`_........`	1931	100
ENST00000481582	GRCh37:21:15646201:15672006:1	1295	`__.......`	1289	87
ENST00000433806	ENSG00000240755 transcript	150	`_........`	157	100
ENST00000433806	ENSG00000240755 transcript	372	`_........`	379	100
ENST00000456661	ENSG00000228166 transcript	227	`_........`	234	100
ENST00000448266	ENSG00000227730 transcript	351	`_........`	358	100
ENST00000426146	ENSG00000236875 transcript	1470	`_........`	1463	100
ENST00000309142	ENSG00000175302 transcript	243	`_........`	236	100
ENST00000451052	ENSG00000175302 transcript	1157	`_........`	1150	100
ENST00000507941	GRCh37:21:14410651:14418742:1	226	`_........`	219	100
ENST00000507941	GRCh37:21:14410651:14418742:1	277	`__.......`	271	87
ENST00000507941	GRCh37:21:14410651:14418742:1	1127	`__.......`	1121	87
ENST00000575263	GRCh37:HSCHR5	1133	`_........`	1126	100
ENST00000494882	ENSG00000243779 transcript	259	`_........`	252	100
ENST00000358444	ENSG00000196138 transcript	740	`_........`	733	100
ENST00000358444	ENSG00000196138 transcript	206	`_......._`	200	87
ENST00000358444	ENSG00000196138 transcript	250	`_......._`	244	87
ENST00000586642	GRCh37:18:12208397:12212464:1	401	`_........`	394	100
ENST00000592801	GRCh37:18:12201981:12212071:1	401	`_........`	394	100
ENST00000582279	ENSG00000266127 transcript	391	`_........`	384	100
ENST00000579008	ENSG00000266613 transcript	873	`_........`	866	100
ENST00000579008	ENSG00000266613 transcript	1064	`_......._`	1058	87
ENST00000581139	GRCh37:18:2945625:2946888:-1	952	`_........`	959	100
ENST00000581139	GRCh37:18:2945625:2946888:-1	621	`_......._`	615	87
ENST00000581139	GRCh37:18:2945625:2946888:-1	714	`_......._`	708	87
ENST00000582850	ENSG00000263606 transcript	596	`_........`	603	100
ENST00000582850	ENSG00000263606 transcript	265	`_......._`	259	87
ENST00000582850	ENSG00000263606 transcript	358	`_......._`	352	87
ENST00000582646	ENSG00000264189 transcript	782	`_........`	775	100
ENST00000582646	ENSG00000264189 transcript	745	`_......._`	751	87
ENST00000584914	ENSG00000263505 transcript	181	`_........`	188	100
ENST00000584914	ENSG00000263505 transcript	72	`_......._`	78	87
ENST00000508893	ENSG00000251588 transcript	2063	`_........`	2056	100
ENST00000508893	ENSG00000251588 transcript	2713	`_........`	2706	100
ENST00000508893	ENSG00000251588 transcript	123	`_......._`	129	87
ENST00000508893	ENSG00000251588 transcript	288	`__.......`	294	87
ENST00000506450	ENSG00000228154 transcript	165	`_........`	158	100
ENST00000504991	ENSG00000250611 transcript	180	`_........`	187	100
ENST00000435701	ENSG00000237746 transcript	1644	`_........`	1651	100
ENST00000431363	ENSG00000267500 transcript	1048	`_........`	1041	100
ENST00000431363	ENSG00000267500 transcript	796	`_......._`	790	87
ENST00000588113	ENSG00000267370 transcript	193	`_........`	200	100
ENST00000588113	ENSG00000267370 transcript	582	`__.......`	588	87
ENST00000503910	ENSG00000249844 transcript	886	`_........`	879	100
ENST00000601934	ENSG00000269546 transcript	415	`_........`	408	100
ENST00000506116	ENSG00000249077 transcript	229	`_........`	236	100
ENST00000513176	ENSG00000251639 transcript	543	`_........`	550	100
ENST00000504019	ENSG00000251595 transcript	384	`_........`	377	100
ENST00000504019	ENSG00000251595 transcript	1247	`_......._`	1241	87
ENST00000504019	ENSG00000251595 transcript	1654	`_......._`	1648	87
ENST00000428247	ENSG00000235039 transcript	351	`_........`	358	100
ENST00000418616	ENSG00000237540 transcript	245	`_........`	238	100
ENST00000552196	ENSG00000257223 transcript	730	`_........`	723	100
ENST00000552196	ENSG00000257223 transcript	285	`__.......`	279	87
ENST00000548719	ENSG00000235324 transcript	756	`_........`	763	100
ENST00000443336	ENSG00000235324 transcript	757	`_........`	764	100
ENST00000335478	GRCh37:3:197784924:197807591:-1	2149	`_........`	2156	100
ENST00000435620	GRCh37:3:197784402:197807542:-1	2353	`_........`	2360	100
ENST00000457344	ENSG00000226046 transcript	26	`_........`	19	100
ENST00000393644	ENSG00000213358 transcript	590	`_........`	597	100
ENST00000467508	GRCh37:HSCHR6	842	`_........`	835	100
ENST00000481951	GRCh37:HSCHR6	1190	`_........`	1183	100
ENST00000494425	GRCh37:HSCHR6	1125	`_........`	1118	100
ENST00000435899	GRCh37:HSCHR6	1606	`_........`	1613	100
ENST00000435899	GRCh37:HSCHR6	3977	`_........`	3970	100
ENST00000435899	GRCh37:HSCHR6	4659	`_........`	4666	100
ENST00000435899	GRCh37:HSCHR6	1591	`_......._`	1597	87
ENST00000435899	GRCh37:HSCHR6	3487	`_......._`	3481	87
ENST00000435899	GRCh37:HSCHR6	3881	`__.......`	3875	87
ENST00000435899	GRCh37:HSCHR6	4646	`__.......`	4640	87
ENST00000435899	GRCh37:HSCHR6	4667	`__.......`	4673	87
ENST00000490292	GRCh37:HSCHR6	1250	`_........`	1257	100
ENST00000490292	GRCh37:HSCHR6	1237	`__.......`	1231	87
ENST00000490292	GRCh37:HSCHR6	1258	`__.......`	1264	87
ENST00000429556	GRCh37:HSCHR6	1843	`_........`	1850	100
ENST00000429556	GRCh37:HSCHR6	3449	`_........`	3456	100
ENST00000429556	GRCh37:HSCHR6	1828	`_......._`	1834	87
ENST00000429556	GRCh37:HSCHR6	3436	`__.......`	3430	87
ENST00000429556	GRCh37:HSCHR6	3457	`__.......`	3463	87
ENST00000552485	ENSG00000228706 transcript	2014	`_........`	2007	100
ENST00000552485	ENSG00000228706 transcript	1963	`__.......`	1957	87
ENST00000454055	ENSG00000235836 transcript	15	`_........`	8	100
ENST00000467363	ENSG00000240097 transcript	776	`_........`	783	100
ENST00000474460	GRCh37:HSCHR6	842	`_........`	835	100
ENST00000473928	GRCh37:HSCHR6	1190	`_........`	1183	100
ENST00000468687	GRCh37:HSCHR6	1125	`_........`	1118	100
ENST00000554632	ENSG00000259155 transcript	98	`_........`	105	100
ENST00000547585	ENSG00000258326 transcript	9	`_........`	16	100
ENST00000550801	ENSG00000235317 transcript	2014	`_........`	2007	100
ENST00000550801	ENSG00000235317 transcript	1963	`__.......`	1957	87
ENST00000455917	GRCh37:HSCHR6	1606	`_........`	1613	100
ENST00000455917	GRCh37:HSCHR6	3923	`_........`	3916	100
ENST00000455917	GRCh37:HSCHR6	4605	`_........`	4612	100
ENST00000455917	GRCh37:HSCHR6	1591	`_......._`	1597	87
ENST00000455917	GRCh37:HSCHR6	3433	`_......._`	3427	87
ENST00000455917	GRCh37:HSCHR6	3827	`__.......`	3821	87
ENST00000455917	GRCh37:HSCHR6	4592	`__.......`	4586	87
ENST00000455917	GRCh37:HSCHR6	4613	`__.......`	4619	87
ENST00000482137	GRCh37:HSCHR6	1250	`_........`	1257	100
ENST00000482137	GRCh37:HSCHR6	1237	`__.......`	1231	87
ENST00000482137	GRCh37:HSCHR6	1258	`__.......`	1264	87
ENST00000413957	GRCh37:HSCHR6	1843	`_........`	1850	100
ENST00000413957	GRCh37:HSCHR6	3395	`_........`	3402	100
ENST00000413957	GRCh37:HSCHR6	1828	`_......._`	1834	87
ENST00000413957	GRCh37:HSCHR6	3382	`__.......`	3376	87
ENST00000413957	GRCh37:HSCHR6	3403	`__.......`	3409	87
ENST00000454171	ENSG00000224059 transcript	1211	`_........`	1204	100
ENST00000481481	GRCh37:HSCHR6	842	`_........`	835	100
ENST00000494784	GRCh37:HSCHR6	1190	`_........`	1183	100
ENST00000492006	GRCh37:HSCHR6	1125	`_........`	1118	100
ENST00000435923	ENSG00000235243 transcript	365	`_........`	372	100
ENST00000416003	ENSG00000230244 transcript	650	`_........`	657	100
ENST00000582878	ENSG00000265683 transcript	481	`_........`	474	100
ENST00000441064	ENSG00000230196 transcript	405	`_........`	398	100
ENST00000553480	ENSG00000259000 transcript	279	`_........`	272	100
ENST00000553480	ENSG00000259000 transcript	1689	`_......._`	1683	87
ENST00000553480	ENSG00000259000 transcript	1873	`_......._`	1867	87
ENST00000553480	ENSG00000259000 transcript	2133	`__.......`	2127	87
ENST00000553480	ENSG00000259000 transcript	2170	`_......._`	2164	87
ENST00000556286	ENSG00000259148 transcript	350	`_........`	343	100
ENST00000572695	GRCh37:17:45532734:45567584:-1	758	`_........`	765	100
ENST00000575291	GRCh37:17:45532474:45569836:-1	1457	`_........`	1464	100
ENST00000554380	ENSG00000258385 transcript	1817	`_........`	1824	100
ENST00000554380	ENSG00000258385 transcript	529	`_......._`	523	87
ENST00000554380	ENSG00000258385 transcript	537	`_......._`	531	87
ENST00000563423	ENSG00000223518 transcript	605	`_........`	612	100
ENST00000439081	ENSG00000226205 transcript	586	`_........`	579	100
ENST00000599191	GRCh37:12:88175940:88177233:-1	858	`_........`	851	100
ENST00000599191	GRCh37:12:88175940:88177233:-1	675	`__.......`	669	87
ENST00000599191	GRCh37:12:88175940:88177233:-1	949	`_......._`	955	87
ENST00000418056	ENSG00000233263 transcript	576	`_........`	569	100
ENST00000452517	ENSG00000227182 transcript	456	`_........`	463	100
ENST00000423752	ENSG00000234671 transcript	715	`_........`	722	100
ENST00000430943	ENSG00000224725 transcript	1181	`_........`	1188	100
ENST00000491307	ENSG00000231409 transcript	256	`_........`	249	100
ENST00000450028	GRCh37:7:77976459:77988775:1	1618	`_........`	1625	100
ENST00000450028	GRCh37:7:77976459:77988775:1	274	`_......._`	268	87
ENST00000413558	ENSG00000230531 transcript	800	`_........`	807	100
ENST00000561352	ENSG00000259505 transcript	193	`_........`	200	100
ENST00000561352	ENSG00000259505 transcript	521	`__.......`	515	87
ENST00000414433	GRCh37:HSCHR6	1583	`_........`	1590	100
ENST00000414433	GRCh37:HSCHR6	3860	`_........`	3853	100
ENST00000414433	GRCh37:HSCHR6	4542	`_........`	4549	100
ENST00000414433	GRCh37:HSCHR6	1568	`_......._`	1574	87
ENST00000414433	GRCh37:HSCHR6	3764	`__.......`	3758	87
ENST00000414433	GRCh37:HSCHR6	4529	`__.......`	4523	87
ENST00000414433	GRCh37:HSCHR6	4550	`__.......`	4556	87
ENST00000414859	GRCh37:HSCHR6	1229	`_........`	1236	100
ENST00000414859	GRCh37:HSCHR6	1216	`__.......`	1210	87
ENST00000414859	GRCh37:HSCHR6	1237	`__.......`	1243	87
ENST00000411514	GRCh37:HSCHR6	1820	`_........`	1827	100
ENST00000411514	GRCh37:HSCHR6	3333	`_........`	3340	100
ENST00000411514	GRCh37:HSCHR6	1805	`_......._`	1811	87
ENST00000411514	GRCh37:HSCHR6	3320	`__.......`	3314	87
ENST00000411514	GRCh37:HSCHR6	3341	`__.......`	3347	87
ENST00000567237	GRCh37:15:32818851:32820842:-1	221	`_........`	214	100
ENST00000454486	ENSG00000223509 transcript	1240	`_........`	1233	100
ENST00000454486	ENSG00000223509 transcript	931	`_......._`	937	87
ENST00000561563	GRCh37:15:32814894:32825942:-1	967	`_........`	960	100
ENST00000561563	GRCh37:15:32814894:32825942:-1	1491	`_........`	1498	100
ENST00000561563	GRCh37:15:32814894:32825942:-1	125	`__.......`	119	87