../../tmp/servers/virsirnadb/983379065
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi14171aaccttgctgcagttagga19
K00108.1BLCNCNP La Crosse virus genome molecule S cDNA to genomic RNA 184...................202100
K00610.1BLCSRNA La Crosse virus S RNA, complete, coding for the N and NS-s pro184...................202100
U12797.1CEU12797 California encephalitis virus - BFS-283 segment S RNA N prote181...................199100
U12800.1CEU12800 California encephalitis virus E6071 S RNA segment, N and NSs 181...................199100
U31989.1MBU31989 Morro Bay virus S RNA segment, nucleocapsid protein (N) and n181...................199100
DQ196120.1 La Crosse virus strain 77 segment small, complete sequence 184...................202100
EF485030.1 La Crosse virus strain LACV/human/1960 segment small, complete sequen184...................202100
EF485033.1 La Crosse virus strain LACV/human/1978 segment small, complete sequen184...................202100
EF485036.1 La Crosse virus strain LACV/mosquito/1978 segment small, complete seq184...................202100
J02390.1SSHS Snowshoe hare bunyavirus small viral RNA 182..t................20094
EU294510.1 Snowshoe hare virus segment small, complete sequence 135..t................15394
D10370.1BLCMRP La Crosse virus M RNA for polyprotein, complete cds 3863_...c.t.........___384968
U70207.1LCU70207 La Crosse virus polyprotein gene, complete cds 3863_...c.t.........___384968
U70207.1LCU70207 La Crosse virus polyprotein gene, complete cds 2237.........ag..______224957
U70208.1LCU70208 La Crosse virus polyprotein gene, complete cds 3863_...c.t.........___384968
U70208.1LCU70208 La Crosse virus polyprotein gene, complete cds 2237.........ag..______224957
EF485037.1 La Crosse virus strain LACV/mosquito/1978 segment medium, complete se3863_...c.t.........___384968
EF485037.1 La Crosse virus strain LACV/mosquito/1978 segment medium, complete se2237.........ag..______224957
U47139.1SAU47139 San Angelo virus Prototype VR723 nucleocapsid protein and non186_______..t.........19757
K02539.1SSHM Snowshoe hare virus, complete M RNA segment coding for G protein 1735_____.t..........__172457
EU262553.1 Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, comple1716_____.t..........__170557
U88057.1MVU88057 Melao virus M segment polyprotein gene, complete cds 2524____..aa.........a.251063
M87664.1BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame 2214.........ag..______222657
U18979.1LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen2237.........ag..______224957
U18980.1LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen2237.........ag..______224957
U70205.1LCU70205 La Crosse virus polyprotein gene, complete cds 2237.........ag..______224957
U70206.1LCU70206 La Crosse virus polyprotein gene, complete cds 2237.........ag..______224957
DQ196119.1 La Crosse virus strain 77 segment middle, complete sequence 2237.........ag..______224957
EF485031.1 La Crosse virus strain LACV/human/1960 segment medium, complete seque2237.........ag..______224957
EF485034.1 La Crosse virus strain LACV/human/1978 segment medium, complete seque2237.........ag..______224957
EU621834.1 Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete72________.........c.8252
EU621834.1 Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete1722_____.t.........___171252