../../tmp/servers/virsirnadb/870020607
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi17631aggtatttgaatttgcatt19
NC_001357.1 Human papillomavirus - 18, complete genome 232...................250100
NC_001357.1 Human papillomavirus - 18, complete genome 2687__............c..__270173
NC_001693.1 Human papillomavirus type 60, complete genome 6037.....a.aa..........601984
NC_001693.1 Human papillomavirus type 60, complete genome 4700____...........a.__471263
NC_010329.1 Human papillomavirus type 88, complete genome 2332.....a..tc.........231484
NC_010329.1 Human papillomavirus type 88, complete genome 4612____...........a.__462463
NC_010329.1 Human papillomavirus type 88, complete genome 4653______..........___466252
NC_001583.1 Human papillomavirus type 26, complete genome 2365_.c...........a..._234978
NC_001583.1 Human papillomavirus type 26, complete genome 3092_.........t.g._____310457
NC_008032.1 Capra hircus papillomavirus type 1, complete genome 6114____............t..610073
NC_008032.1 Capra hircus papillomavirus type 1, complete genome 1673_..........________168252
NC_008184.1 Tursiops truncatus papillomavirus 2, complete genome 7560____...........a...757473
NC_008184.1 Tursiops truncatus papillomavirus 2, complete genome 7564__.a..........a..c.758073
NC_008184.1 Tursiops truncatus papillomavirus 2, complete genome 3886___.t...c........._390068
NC_008184.1 Tursiops truncatus papillomavirus 2, complete genome 3870_.c..c..ct.........388773
NC_012213.1 Human papillomavirus type 108, complete genome 1697___.............___170968
NC_012213.1 Human papillomavirus type 108, complete genome 6709...a.........at.t..672778
NC_012486.1 Human papillomavirus type 112, complete genome 309___.t...t..........32473
NC_012486.1 Human papillomavirus type 112, complete genome 4766___.........a..____477757
NC_012486.1 Human papillomavirus type 112, complete genome 5699_______.a..........571057
NC_008189.1 Human papillomavirus type 101, complete genome 1304_____............__131563
NC_008189.1 Human papillomavirus type 101, complete genome 4312____...........a.__432463
NC_008189.1 Human papillomavirus type 101, complete genome 3808.........tg..._____379563
NC_008189.1 Human papillomavirus type 101, complete genome 1443___..........______143452
NC_013035.1 Human papillomavirus 116, complete genome 2322_____............__233363
NC_013035.1 Human papillomavirus 116, complete genome 4484____.........c.a.__449657
NC_001694.1 Human papillomavirus - 61, complete genome 1448....cc.........t.__143273
NC_001531.1 Human papillomavirus - 5, complete genome 2582.a.g..........c..__259873
NC_014954.1 Human papillomavirus type 131, complete genome 5030_..........gc..t.._501473
NC_014954.1 Human papillomavirus type 131, complete genome 1103____.........._____109452
NC_001595.1 Human papillomavirus type 7, complete genome 2617__..g.........c..__263168
NC_001595.1 Human papillomavirus type 7, complete genome 2698...ag..cc........._268173
NC_001595.1 Human papillomavirus type 7, complete genome 136___..........______14552
NC_007612.1 Bovine papillomavirus 7, complete genome 4672...a.........a.____468668
NC_007612.1 Bovine papillomavirus 7, complete genome 4829____...........a.__484163
NC_010107.1 Bandicoot papillomatosis carcinomatosis virus type 1, complete genome3584..........t..______357263
NC_010107.1 Bandicoot papillomatosis carcinomatosis virus type 1, complete genome6138_.c..aa..........__612368
NC_014835.1 Human papillomavirus type 148, complete genome 1606___...........t.___159463
NC_014835.1 Human papillomavirus type 148, complete genome 4949____...........a.__496163
NC_001354.1 Human papillomavirus type 41, complete genome 2584..a..........______257263
NC_005134.2 Human papillomavirus type 96, complete genome 2682___..........._____269257
NC_005134.2 Human papillomavirus type 96, complete genome 6328____...........____631857
NC_012123.1 Equine papillomavirus 2, complete genome 2676__...........______268657
NC_001591.1 Human papillomavirus type 49, complete genome 2544___..........._____255457
NC_001591.1 Human papillomavirus type 49, complete genome 1367_________..........137652
NC_015267.1 Camelus dromedarius papillomavirus type 1, complete genome 7014_____...........___700457
NC_015267.1 Camelus dromedarius papillomavirus type 1, complete genome 7556___.........ca...__756963
NC_001355.1 Human papillomavirus type 6b, complete genome 2959___..aa..c.........294468
NC_001355.1 Human papillomavirus type 6b, complete genome 6024_________..........603352
NC_001838.1 Common chimpanzee papillomavirus 1, complete genome 2964___...ac.c.........294968
NC_004500.1 Human papillomavirus type 92, complete genome 6108___..ac.........t..609368
NC_011280.1 Sus scrofa papillomavirus type 1, complete genome 2055_.c.t.........a..__204068
NC_006564.1 Canine papillomavirus 2, complete genome 5497___..g.........a.__551063
NC_001586.1 Human papillomavirus type 32, complete genome 2582___.g.........c..__259563
NC_006563.1 Trichechus manatus latirostris papillomavirus 1, complete genome 2170___.t..a.........__215763
NC_015268.1 Camelus dromedarius papillomavirus type 2, complete genome 7631_____..........a.c.761863
NC_001541.1 Cottontail rabbit papillomavirus, complete genome 1823_______..t.........181257
NC_003748.1 Equus caballus papillomavirus - 1, complete genome 6354__.........c.._____636557
NC_003748.1 Equus caballus papillomavirus - 1, complete genome 7038___.g..........____702757
NC_004194.1 Equinus papillomavirus, complete genome 6333__.........c.._____634457
NC_004194.1 Equinus papillomavirus, complete genome 7017___.g..........____700657
NC_008582.1 Old World harvest mouse papillomavirus, complete genome 2392_____.........a..__240357
NC_009752.1 Bovine papillomavirus 8, complete genome 4725__.c.........._____471457
NC_014469.1 Gammapapillomavirus HPV127, complete genome 1808_______..c.........179757
NC_014469.1 Gammapapillomavirus HPV127, complete genome 1177__...aca.........g.116168
NC_004197.1 Bovine papillomavirus 3, complete genome 5724___.c..........____571357
NC_004197.1 Bovine papillomavirus 3, complete genome 2771____..ca.........__278357
NC_014956.1 Human papillomavirus type 134, complete genome 2481___.........c..____249257
NC_014326.1 Mus musculus papillomavirus type 1, complete genome 5611_______.a..........562257
NC_002232.1 Rabbit oral papillomavirus, complete genome 548.........._________53952
NC_010817.1 Bandicoot papillomatosis carcinomatosis virus type 2, complete genome6111_______..........__610252
NC_013236.1 Canine papillomavirus 5, complete genome 6411_________..........642052
NC_001457.1 Human papillomavirus type 4, complete genome 386_________..........39552
NC_001458.1 Human papillomavirus type 63, complete genome 491_____..........____48252
NC_014185.1 Human papillomavirus 121, complete genome 5495_________..........550452
NC_014185.1 Human papillomavirus 121, complete genome 5575_____.........ca.._556357
NC_001676.1 Human papillomavirus 54, complete genome 2041____...gtc.........202763
NC_001691.1 Human papillomavirus type 50, complete genome 573_____.g.........t._58557
NC_011531.1 Chelonia mydas papillomavirus 1, complete genome 470______..tg.........48257
NC_001526.2 Human papillomavirus type 16, complete genome 1925____.........at..__193757