../../tmp/servers/virsirnadb/287125591
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20341caggagcacctataccaac19
L24917.1HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS 2769...................2787100
DQ473510.1 Human rhinovirus 75, complete genome 2773..........a........279194
FJ445118.1 Human rhinovirus 18 strain ATCC VR-1128, complete genome 2758..........a......._277589
FJ445149.1 Human rhinovirus 67 strain ATCC VR-1177, complete genome 2767..........at.......278589
FJ445157.1 Human rhinovirus 81 strain ATCC VR-1191, complete genome 2761..........c..t.....277989
DQ473494.1 Human rhinovirus 74, complete genome 2766...........t....c._278384
EF173418.1 Human rhinovirus 78, complete genome 2784.t.....c.........._280184
FJ445114.1 Human rhinovirus 9 isolate F01, complete genome 2769..........cc......_278684
FJ445115.1 Human rhinovirus 9 isolate F02, complete genome 2768..........cc......_278584
FJ445142.1 Human rhinovirus 58 strain ATCC VR-1168, complete genome 2783...........g....c._280084
FJ445183.1 Human rhinovirus 78 strain ATCC VR-1188, complete genome 2784.t.....c.........._280184
FJ445143.1 Human rhinovirus 60 strain ATCC VR-1473, complete genome 2769..........at....t..278784
EF173423.1 Human rhinovirus 37, complete genome 2795..........a.at...._281278
FJ445172.1 Human rhinovirus 97 strain ATCC VR-1297, complete genome 2787..........c.ac...._280478
FJ445172.1 Human rhinovirus 97 strain ATCC VR-1297, complete genome 2016.........._________202552
M16248.1HRV89 Human rhinovirus type 89 (HRV89), complete genome 2795...........g.c..___281073
FJ445132.1 Human rhinovirus 45 strain ATCC VR-1155, complete genome 2756...........c.c..___277173
FJ445165.1 Human rhinovirus 89 isolate F09, complete genome 2793...........g.c..___280873
FJ445166.1 Human rhinovirus 89 isolate F08, complete genome 2795...........g.c..___281073
FJ445184.1 Human rhinovirus 89 strain ATCC VR-1199, complete genome 2795...........g.c..___281073
NC_001617.1 Human rhinovirus 89, complete genome 2795...........g.c..___281073
EF173421.1 Human rhinovirus 27, complete genome 2021..........agg...t..203978
EF173421.1 Human rhinovirus 27, complete genome 2792..........a.ac...__280873
FJ445155.1 Human rhinovirus 79 strain ATCC VR-1189, complete genome 2801..........c.at..c..281978
FJ445155.1 Human rhinovirus 79 strain ATCC VR-1189, complete genome 214___..c..........___20263
FJ445186.1 Human rhinovirus 27 strain ATCC VR-1137, complete genome 2021..........agg...t..203978
FJ445186.1 Human rhinovirus 27 strain ATCC VR-1137, complete genome 2792..........a.ac...__280873
FJ445113.1 Human rhinovirus 8 strain ATCC VR-1118, complete genome 2003..........aga...c..202178
FJ445170.1 Human rhinovirus 95 strain ATCC VR-1301, complete genome 2005..........aga...c..202378
FJ445124.1 Human rhinovirus 26 strain ATCC VR-1136, complete genome 2788..........a.at...__280473
FJ445156.1 Human rhinovirus 80 strain ATCC VR-1190, complete genome 3077..a.........g.g..__309373
FJ445112.1 Human rhinovirus 5 strain ATCC VR-485, complete genome 3332..t..........______332063
FJ445112.1 Human rhinovirus 5 strain ATCC VR-485, complete genome 2019.........aaggc.....203773
FJ445164.1 Human rhinovirus 86 strain ATCC VR-1196, complete genome 2796..........c.at..t._281373
FJ445164.1 Human rhinovirus 86 strain ATCC VR-1196, complete genome 3327.........a.gg.g..__334368
FJ445119.1 Human rhinovirus 19 strain ATCC VR-1129, complete genome 6030..a..c.ct........._601373
FJ445131.1 Human rhinovirus 43 strain ATCC VR-1153, complete genome 6029..a..c.tt........._601273
DQ473485.1 Human rhinovirus 3, complete genome 3091..a.........g.g.___310668
DQ473487.1 Human rhinovirus 35, complete genome 2028.t.........gg...___204368
EF173422.1 Human rhinovirus 3, complete genome 3091..a.........g.g.___310668
FJ445187.1 Human rhinovirus 35 strain ATCC VR-1145, complete genome 2028.t.........gg...___204368
FJ445121.1 Human rhinovirus 21 strain ATCC VR-1131, complete genome 2306_.a.t.........a..__232168
FJ445153.1 Human rhinovirus 72 strain ATCC VR-1182, complete genome 221__.t.c..........___20863
EF173414.1 Human rhinovirus 11, complete genome 6015____.c..t........._600263
DQ473488.1 Human rhinovirus 48, complete genome 2153_______..........__216252
EF173420.1 Human rhinovirus 17, complete genome 807_..........________81652
FJ445168.1 Human rhinovirus 91 strain ATCC VR-1292, complete genome 809_..........________81852
FJ445160.1 Human rhinovirus 82 strain ATCC VR-1192, complete genome 2768_..........________275952
FJ445130.1 Human rhinovirus 42 strain ATCC VR-338, complete genome 821_.........agc..t.._83768